Triticum dicoccoides (wild emmer wheat): 119302860
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Entry
119302860 CDS
T07278
Name
(RefSeq) phytoene synthase 2, chloroplastic-like
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc00906
Carotenoid biosynthesis
tdc01100
Metabolic pathways
tdc01110
Biosynthesis of secondary metabolites
Module
tdc_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
119302860
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
tdc01006
]
119302860
Enzymes [BR:
tdc01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
119302860
Prenyltransferases [BR:
tdc01006
]
Terpene biosynthesis
Squalene/phytoene synthase
119302860
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
119302860
NCBI-ProteinID:
XP_037435798
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All DBs
Position
5A:565618633..565621011
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AA seq
413 aa
AA seq
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MLSTARAVTSPAACAAQHQQHGGSRFVVFLAGDDGRGAAGSSSVRAPRPRSVAARAAGSS
NHAVCLEAAAPWSMDCVAAPATVSYEESVRQVVLKQAALAASTTPRKAQHAGRDAGVLDA
AFDRCGAVCKEYAKTFYLATQLMTPERRRAIWAIYVWCRRTDELVDGPNAAHTSALALDR
WESRLDGVFAGRPYDMLDAALADAVAAFPAVDERPFRDMVQGMRMDLAKSRYATFDELYL
YCYRVAGTVGLMTVPVMGVSPGSPADVETVYAGALALGVANQLTNILRDVGEDARRGRIY
LPQDELAMAGISEADIFAGRVTDEWRSFMKGQIARARAYFKQAEQGAAELNQESRWPVWA
SLLLYRQILDEIEANGYDNFSKRAYVPKAKKLAALPKAYLRSLMPPPSSQRRR
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgctctccacggcccgcgcggtgacctcgcccgccgcgtgcgctgcccagcaccagcag
catggcgggagccggttcgtcgtgttcctggccggcgatgacgggaggggagctgccggt
tccagcagcgtgcgtgcgccgaggccgcgctctgtggcagcgcgtgccgccggctcgtcc
aaccacgctgtctgcctcgaggcggccgcgccgtggagcatggactgtgtcgcggcgccg
gcgaccgtgtcgtacgaggagagcgtgcgccaggtcgtgctcaagcaggcggcgctcgcg
gcctcgaccacgccgaggaaggcgcagcacgccggccgtgacgccggcgtgctggacgcg
gccttcgaccgctgcggcgcggtgtgcaaggagtacgccaagacgttctacctggccacg
cagctgatgacgccggaacggaggcgggcgatctgggcgatatacgtgtggtgccggagg
acggacgagctggtggacggcccgaacgcggcgcacacgtcggcgctggcgctggaccgc
tgggagtcgcgcctcgacggcgtcttcgccggccggccctacgacatgctcgacgcggcg
ctggccgacgccgtggccgccttcccggcggtcgacgagcggccgttccgggacatggtc
caggggatgcgcatggacctcgccaagtcccgctacgccaccttcgacgagctctacctc
tactgctaccgcgtggccggcaccgtggggctcatgaccgtccccgtcatgggtgtctcc
ccgggctccccggcggacgtggagacggtgtacgccggcgcgctcgccctcggcgtcgcc
aaccagctcaccaacatcctcagggacgtcggcgaggatgcgaggaggggaaggatctac
ctgccgcaggacgagctagccatggccggcatctccgaggcggacatcttcgccggccgt
gtcaccgacgagtggaggagcttcatgaagggacagatcgcgagggccagggcctacttc
aaacaagccgagcaaggcgccgccgagctcaaccaggagagccgatggccggtgtgggca
tctctgcttctgtaccggcagatcctggacgagatcgaggccaacggctacgacaacttc
agcaagcgggcctatgttcccaaggccaagaagctggcggcgctgcccaaagcttacctc
aggtccctcatgcctcctccttcttcgcagaggcgccgttga
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