Triticum dicoccoides (wild emmer wheat): 119324916
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Entry
119324916 CDS
T07278
Name
(RefSeq) lycopene beta cyclase, chloroplastic-like
KO
K06443
lycopene beta-cyclase [EC:
5.5.1.19
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc00906
Carotenoid biosynthesis
tdc01100
Metabolic pathways
tdc01110
Biosynthesis of secondary metabolites
Module
tdc_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
119324916
Enzymes [BR:
tdc01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.19 lycopene beta-cyclase
119324916
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GFIT
Motif
Pfam:
Lycopene_cycl
Pyr_redox_2
DAO
NAD_binding_8
FAD_oxidored
FAD_binding_2
Thi4
Pyr_redox
HI0933_like
FAD_binding_3
NAD_binding_9
Trp_halogenase
Pyr_redox_3
3HCDH_N
GIDA
Motif
Other DBs
NCBI-GeneID:
119324916
NCBI-ProteinID:
XP_037454577
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Position
6B:251795006..251796881
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AA seq
486 aa
AA seq
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MATTALLLRAHHACRPPPPAPPGRAAIVCRATASASAGQALRSLAPPPRPELLSLDLPRY
DPARSRPVDLAVVGGGPAGLAVAQRVAEAGLSVVSIDPSPGLVWPNNYGVWVDEFEAMGL
SDCLDTVWPSASVFIDDHTSKSLHRPYARVARRKLKSTMMDRCIAHGVRFHQAKVAKVVH
NEASSLLICDDGVAIPATVVLDATGFSRCLVQYDKPYNPGYQVAYGILAEVDEHPFDIDK
MLFMDWRDSHLPEGSAIKDRNSRVPTFLYAMPFSPTRIFLEETSLVARPGLSMDDIQERM
AARLRHLGIRIRSVEEDERCVIPMGGPLPVLPQRVVGIGGTAGMVHPSTGYMVARTLATA
PIVADSIVRFLDTGNGGIAGDALAAEVWKELWPTDRRRQREFFCFGMDVLLKLDLQGTRR
FFNAFFDLEPHYWHGFLSSRLLLPELLMFGLSLFAHASNTSKLEIMAKGTLPLAKMVGNL
IQDKDR
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggccaccaccgccctcctcctccgcgcccaccacgcctgccggccgccgccgcccgcg
ccgccggggcgggcggcgatcgtctgcagggccacggcgtccgcgtcggcggggcaggcg
ctgcgctcgctggccccgccgccgcggcccgagctgctctccctcgacctgccccgctac
gacccggcgcgctcccggcccgtcgacctcgctgtcgtgggcggcgggcccgcggggctc
gccgtggcgcagcgcgtcgccgaggcgggcctctccgtcgtctccatcgacccctccccg
ggcctcgtctggcccaacaactacggcgtctgggtggacgagttcgaggccatgggcctc
tccgactgcctcgacaccgtctggccctccgcctccgtcttcatcgacgaccacacctcc
aagtcgctccaccgcccctacgcccgcgtcgcccgccgcaagctcaagtccaccatgatg
gaccgctgcatcgcccacggcgtccgcttccaccaggccaaggtcgccaaggtggtccac
aacgaggcatcctccctcctcatctgcgacgacggcgtcgccatcccggccaccgtcgtc
ctggacgccaccggcttctcccgctgcctcgtgcagtacgacaagccctacaacccgggc
taccaggtcgcctacggcatcctcgccgaggtcgacgagcaccccttcgacatcgacaag
atgctcttcatggactggcgcgactcccacctccccgaggggtccgcgatcaaggaccgg
aacagccgcgtgcccaccttcctctacgccatgcccttctcgcccaccaggatcttcctc
gaggagacgtcgctggtcgcgcgcccggggctctccatggacgacatccaggagcgcatg
gccgcgcgcctgaggcacctgggaattcgcatccggagcgtcgaggaggacgagcgctgc
gtgatccccatgggcgggccgctgcccgtgctgccgcagagggtggtgggcatcggcggc
acggccgggatggtgcatccgtccacagggtacatggtggcgcgcacattggcgaccgcg
cccatcgtggcagactccattgtgcggtttctagacactggaaatggtggcatcgccggg
gacgcgctcgccgccgaggtgtggaaggagctgtggccgacggacaggcggcggcagagg
gaattcttctgcttcggcatggacgtcctgctcaagctggacctccaaggtacacgacgc
ttcttcaacgcattcttcgacctcgagccgcactactggcacggcttcctctcgtcgagg
ctgctcctgcctgagctcttgatgttcgggctctcgctgttcgcgcacgcttccaacacg
tccaagctggagatcatggccaagggcaccctgcctcttgccaagatggtcggcaacttg
atacaggacaaggataggtga
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