Triticum dicoccoides (wild emmer wheat): 119330337
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Entry
119330337 CDS
T07278
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1-like
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03020
RNA polymerase
tdc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
119330337
09124 Replication and repair
03420 Nucleotide excision repair
119330337
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tdc03021
]
119330337
03400 DNA repair and recombination proteins [BR:
tdc03400
]
119330337
Enzymes [BR:
tdc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
119330337
Transcription machinery [BR:
tdc03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
119330337
DNA repair and recombination proteins [BR:
tdc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
119330337
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_5
TACC_C
Motif
Other DBs
NCBI-GeneID:
119330337
NCBI-ProteinID:
XP_037459340
LinkDB
All DBs
Position
7A:143884064..143888541
Genome browser
AA seq
871 aa
AA seq
DB search
MDARFPYSPAEVAKVQLVQFGILSPDEIRQMSVAVIEHAETMERGKAKPGGLSDPRLGTI
DQKIKCDTCMAGMAECPGHFGHLELAKPMFHIGFIKTVLSIMRCVCFNCSKILADEEDTK
FKQALKISNPKNRLRRIYDACKSKKTCAGGGELEVQDQQGTDETLKKRGGCGAQQPSITV
DGMKMVAEFEATKKKTDDQDQLPELVERKQILSAERVLNVLKHISDDDCLLLGLNPKCAR
PDWMILQVLPIPPPHVRPSAMMDTSSRSEDDLTHQLVMIIRHNENLTRQERNGAPAHIIK
EFAQLLQFHIATYFGNDLPGQPRANQHSGRPIKSICSRLKAKEGWIRGNLIGKHVGFSAR
TVVTPDPNINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
EDGQRVDLRYVKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMPIMGHRVKIMPCST
FCLNLSVTSPYNADFDADEMNMHVPQSFETTAVVLELMMVSKCIVSPQANIPAMGIVQDT
LLGCRKITKRDTLIEKDIFMNMLMWWEDFDGKVPAPAILKPRPIWTGKQVFNLIIPKLIN
LISFSAWHAETECGFITPGDTMVRIEKGELLSGTLCKRTLRTSTGSLIHAICEEVGPDAA
LKFLGHTQSLVNYWLLQNGFSIGIGDAIADADTMEKIDETIGTAKNDVKELIKQAQEKNL
EPEPGLTMMESFENRVNQILSKAYDDAESSAQKGLSESNNLKAMVTAGSKGSFINISQMI
ACLGQQKIEGKRIPFGFVDRTLPQFTKDDYGPESRGFVQNSYLRGLTPQEFFFHAMVSRE
GLIDAAVRTPRQGRQYSGEAREGYGAHRDET
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgaggttcccgtactcgccggccgaggtggccaaggtgcagctcgtgcagttc
ggcatcctcagcccggatgaaatcaggcaaatgtcagtggcggtgatagagcatgcagag
actatggagaggggaaaggcgaagcctgggggtttgagtgaccctcgtttgggtactatt
gaccagaagatcaagtgtgatacatgtatggctgggatggctgagtgcccgggccacttt
ggccaccttgagcttgcaaagccaatgttccacatcggcttcatcaagactgtactctcc
ataatgcgctgtgtgtgcttcaactgttccaagatcctggcagacgaggaggatactaag
ttcaagcaagctctgaaaattagtaaccccaaaaatagattaagaagaatatatgatgct
tgcaagagcaaaaagacttgtgctggtggtggtgaacttgaggttcaagatcagcagggc
actgatgagacactaaagaagagaggtggttgtggtgctcagcagccaagtatcacagtt
gatggtatgaagatggttgcagagtttgaagcaacaaagaagaaaactgatgatcaagat
caactccctgaactagtggagcgaaagcaaattctctctgccgagagggtccttaatgtt
ctcaagcatataagtgatgatgactgtcttttgttgggcctgaatcctaaatgcgctcgt
cctgattggatgatactgcaagtccttcctattcctccaccgcacgtgagaccatctgcc
atgatggatacttcctccagaagtgaggatgatttgactcatcaattagtgatgataatt
cgacataatgagaatttgacgaggcaagagagaaatggagccccagctcacattataaaa
gagtttgctcagttgttgcagtttcacattgcaacgtacttcggcaatgatcttcctgga
caaccaagggccaatcagcattctggaaggcctataaaatcaatttgcagcaggctgaaa
gcaaaagaaggttggattagaggaaacctaattgggaagcatgttggtttctcagctcgt
actgtcgtcacaccagatccgaacatcaacattgatcaattgggggtgccatggagtatt
gctttgaatctgacatacccagaaactgtcactccatataacatcgagaggttgaaagag
ctagtagaatatgggcctcaccctccgccagggaagactggtgcaaagtacattatcagg
gaagatggtcagagagtggatcttcgctatgtgaagaaaagtagtgatcagcatttggag
ctgggttacaaggtggaaagacacctcaatgatggagattttgtccttttcaatcggcaa
ccaagccttcacaaaatgcctatcatggggcatcgtgttaaaattatgccctgctcaact
ttctgcctgaacttgtctgtcacatcaccgtacaatgcagattttgatgcggatgaaatg
aatatgcatgttcctcagtcatttgagaccacagctgtagttttagagttgatgatggtt
tcaaaatgcattgtctcacctcaagcgaatatacctgctatgggtattgtccaggacaca
cttcttgggtgtcgaaaaatcaccaaaagggacactcttattgaaaaggacatatttatg
aacatgttaatgtggtgggaagattttgatgggaaggtccctgcccctgccattttgaaa
ccaaggccgatttggactggcaaacaagttttcaacttgattatccccaagctaatcaat
ttaataagtttttcagcctggcatgctgaaacagagtgtggatttattactcctggtgat
actatggtccggatagagaagggagagcttctgtctggtacactttgcaaaagaacactt
aggacatcaactggaagtcttattcatgctatttgtgaagaggtagggccagatgctgca
ctgaagttcttgggtcatacacagtcgctggtcaactactggcttctgcaaaacggtttc
agtattggtattggagatgcaattgcagatgcagataccatggagaagattgatgagaca
attggaacagctaagaatgatgtgaaggagcttattaagcaagcacaagaaaagaacttg
gaacctgagccaggactcacaatgatggaatcatttgagaaccgagtaaatcagattctt
agcaaggcttatgatgatgctgagagtagtgctcagaagggtttgtctgagagcaacaat
ttgaaagccatggtcactgcaggctcaaaaggcagtttcattaatatttcgcaaatgatt
gcttgtcttggacagcagaaaattgagggcaagcggattccgtttggttttgttgatcgt
acattaccccaatttacgaaagatgactatggccctgaaagtcgtgggtttgttcagaat
tcgtaccttcgaggtctgacaccacaggagtttttcttccatgctatggttagtagagaa
ggtttgattgatgctgctgtgagaactccgagacagggaaggcagtattcaggggaggct
cgtgaaggctatggagcacatcgtgatgaaacatga
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