Triticum dicoccoides (wild emmer wheat): 119333910
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Entry
119333910 CDS
T07278
Name
(RefSeq) DNA-directed RNA polymerase I subunit 2-like
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
119333910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tdc03021
]
119333910
Enzymes [BR:
tdc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
119333910
Transcription machinery [BR:
tdc03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
119333910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
DUF3134
Motif
Other DBs
NCBI-GeneID:
119333910
NCBI-ProteinID:
XP_037462528
LinkDB
All DBs
Position
1B:339979374..340002160
Genome browser
AA seq
1187 aa
AA seq
DB search
MPTAAGKSSAAAAAAAAGKEEDYATLRELYRPHIESFDYFLDEGLDKMLLSIRPMEITHP
SNATLRMSLEKGHVLPPMKDGRLEQPLYPQECRQGRISYSGEFKVEAVFQFNDGAPIRQT
FNFGHLPIMLMSKLCHLRGADPRKLIYHGEEATEMGGYFISGGLERLIRILILQKRNYPM
GMVRGAFIKRGAGYTDKAVVMRCVHHDQSSVTVKLYYLQNGSARLGFWFAGREILLPVGI
VLKALIDTSDREIFASLTCCYSDKRERGKGVVSTQLIGERTQIILDEVRALSLFTRTQCL
VHIGKYFRSAMEGFEKDDYETVAEAVIKDYILVHLQNDNHAKFNLLIFMLQKLYALVDQT
TSPDNPDALQFQEALLPGHLITVFLKDRIQDWLQKSKRLIMEEITKNKSFELNNSLEIRK
FLSKYTTSVGRAIETLIKVGRANSQSMLDLPQREGMTIQAERLNFHRYISHFRSVHRGSS
FAKMRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTSICRISSCYNSEGAIKDFQKIK
DKLLVELVRGGMIPLLPKMEHTGPPEILHVHLDGCIVGSIASAKIEEVVNYLRRLKLLAH
PATPEDLEVGYVPLSLGGAYPGLYLFTSPARFVRPVKNLVSLPDGEPRIELIGPFEQAFM
EIRCPDGGDGGRKKEFPATHEEIHPTAILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGF
CGQALKYRTDVKAFHLQTPQSPIVRTATYKRYHMDEFPSGTNAIVAVLSYTGYDMEDAMI
LNKSAVDRGMFRGDIFQTECIDLSAKRTENVPEIFAKSPLSRDSNNVIDSDGLPRVGETV
VPYEQYYSIYNTLTGAIRPVRLKGTEPAAIDYVALNGTNSKGSLQKVNIRLRRKRNPIIG
DKFSSRHGQKGVCSQLWPDIDMPFSANTGMRPDLIINPHAFPSRMTIAMLIESIAAKAGS
AHGKFIDATPFASSVKEDGENRCKFDCIVDELGPMLASYGFNHHGTEVLYSGLFGTELQF
EIFIGPVYYQRLRHMVSDKFQVRTTGRIDQVTKQPIGGRKHGGGIRFGEMERDALLAHGA
SYLLHDRLHTCSDYHVADVCSLCGSLLSATVINSDTQKKSKRHMLGVNTVRPAKNFACQA
CQTNKGMETVAMPYVFRYLAAELAAMNIKLDLRLSNRREAPPSNESC
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atgccgacggcggccgggaaatcgtccgccgccgcggcggcggcggcggcgggtaaggag
gaggactacgcgacgctgcgggagctgtaccggccgcacatcgagtcgttcgactacttc
ctcgacgaggggctcgacaagatgctcctctccatccgccccatggagatcacccacccc
tccaacgctaccctcagaatgtccttagagaagggtcatgtgctcccaccgatgaaggat
ggtcggttggaacaaccgctctacccgcaagagtgcaggcaaggtagaatttcatatagt
ggcgaattcaaagtggaggctgtcttccaatttaatgatggggcgccaatcagacaaacc
ttcaattttggtcatttgccgattatgttgatgtcaaaactttgccacctaagaggtgct
gatccacgtaaattgatctaccacggtgaagaggccacagaaatgggcgggtactttata
agtggtggcttggagagacttatccgaattcttattttacagaagcgtaattatcctatg
ggcatggtccgtggtgcttttattaaacgtggtgcgggatacactgacaaagcagtggtg
atgagatgtgttcaccacgaccagtccagcgtgactgtaaagttgtattacctacaaaat
ggaagtgcaaggctagggttttggtttgcaggcagagaaattctccttccagttgggatt
gttctcaaggcccttattgatacaagtgaccgggaaatatttgcaagcctgacatgctgc
tacagtgataaacgtgaaagaggaaagggagttgtcagcactcagctaattggtgaaagg
acacaaataattcttgacgaagtcagagctctgtcccttttcacgcgcacgcaatgctta
gtgcatattggcaagtactttcgatctgcaatggaaggttttgaaaaagatgattatgaa
accgttgctgaggcggttatcaaggactatattctcgtgcatctgcaaaatgacaaccac
gcaaagtttaatcttttaatatttatgctgcagaaactttatgctcttgttgatcaaact
acgtcacctgataatcctgacgcacttcaatttcaagaagcactcttgcctgggcacctg
atcacagtttttcttaaggataggattcaagattggttgcaaaagtctaagcgtttaatt
atggaagagattacgaagaataaaagctttgaactcaataactcactggagattaggaaa
tttcttagtaaatatacaacatctgtaggcagagctattgagaccttgataaaggttggc
agagcgaattcacaatcaatgttggatcttccacagagagaagggatgaccattcaagct
gagcgactcaactttcatcgctatatctcacattttcgttctgttcataggggttcttct
tttgctaaaatgcgtacaacaactgttagaaagttacttccagagtcctggggtttcctg
tgtccagttcatacaccggatggagagccttgtggcttactgaaccatatgacttccata
tgccgtatttcatcctgctacaactcagaaggggcaattaaagattttcagaaaataaag
gataagcttttagttgaattggttcgtggtggaatgatcccattgttgccgaagatggag
catactggtcccccggagatcctgcatgtccatttggatggatgcattgtcggttctatt
gcttctgctaagattgaggaagtagttaactatcttcgaagattaaagctactggcacac
ccagcgactccggaggatttagaagtgggctatgttcccttaagtcttggtggggcttat
cctgggctctatctttttacaagtcctgcaagatttgttcgaccagtgaaaaatctggtt
agcctacctgatggagagccacgtattgagcttattggaccatttgaacaggcatttatg
gagatacgatgtcctgatggtggggacggtgggagaaaaaaagagtttcctgcgactcat
gaagaaattcaccctactgccattctcagtgtagttgcaaatctgactccttggtctgat
cacaaccaaagtcctcggaacatgtaccaatgccagatggcaaagcaaactatgggtttt
tgtggccaagctttaaaatatcgtacagatgtcaaggcattccatctacagactcctcag
tcgccaattgttcgaacagctacatataaaagatatcatatggatgaatttccatcagga
acaaatgccattgttgcggtgctatcatatacaggttatgacatggaggatgccatgatt
ttaaataaatcagccgttgaccgtgggatgttccgtggagatatcttccagacagagtgc
attgacttgtcagcaaaaaggacagaaaatgtcccagaaatctttgccaaaagccctctt
tcgagggactcgaacaatgtaattgattcagatggccttcctcgggttggagagacagta
gttccatatgagcagtactacagtatctataatacactcaccggtgcaataaggccagtc
agactaaaggggacagagccagcagctattgactatgttgctctcaacggaacaaattca
aaaggttccctgcagaaggtaaatattcgtctgcgtcgcaagaggaatcctataattggt
gacaagttcagcagtagacatgggcaaaagggagtttgttcacagttgtggcctgacatt
gatatgccgttctctgcaaataccggcatgaggccagatctcatcattaatcctcatgct
tttccttcaagaatgacaattgcaatgcttatagagtccatagcagcaaaggctggaagt
gcacatgggaagttcattgatgccacaccttttgcaagctcagtcaaagaggacggtgaa
aatcgttgtaaatttgattgtattgtggatgaactaggtcccatgctagcatcttatgga
tttaatcatcatggaaccgaggtcctgtacagtgggctttttggcaccgagcttcaattt
gagattttcattgggcctgtttactaccaacgccttcgtcatatggtctcagacaaattt
caggttcgcaccacaggtcgtatagaccaagtaacgaaacagccaataggaggaaggaaa
catggtggagggattcggttcggtgagatggagcgtgacgcgctccttgctcacggcgct
tcatatctcttgcacgacaggctccatacctgctcggactatcacgtagcggacgtgtgc
tccctttgcgggagcctcctgtcggcgacagtaataaactcggacacacagaagaaatcc
aagcgccacatgctgggtgtcaacacggtgaggcccgcgaagaactttgcatgccaggcc
tgccagacaaacaaagggatggagacggtggcgatgccgtacgtcttcaggtatctagcg
gccgagctggcggctatgaacataaagctggatctccggctcagcaacaggagagaagct
cctcccagcaacgaatcttgctag
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