Triticum dicoccoides (wild emmer wheat): 119338194
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Entry
119338194 CDS
T07278
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc00040
Pentose and glucuronate interconversions
tdc01100
Metabolic pathways
Module
tdc_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
119338194
Enzymes [BR:
tdc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
119338194
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Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
Motif
Other DBs
NCBI-GeneID:
119338194
NCBI-ProteinID:
XP_037466400
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Position
7B:complement(557295541..557297401)
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AA seq
420 aa
AA seq
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MAFRNVAMRVLLLLAVVSAAYAAKGKAEKKESADGPAASGPAASGEGGEYDITKLGAKPD
GTTDCTEAVEEAWASACGSTGNPTIIIPKGDFLTGALNFTGPCKGDGLNIKLEGNLLASN
DLAKFKSNWIEIMRVKKLSITGKGNIDGQGKAVWTKNSCQKNYNCKILPNSLVLDFCDDA
LIEGISIINSKFFHMNIFQCKGVTVKDVKVNAPGDSPNTDGIHMGDSSNVSIIDTTIGVG
DDCISIGPGSTQVNISGVTCGPGHGISIGSLGRYKDEKDVTDITVKNCVLKGSTNGLRIK
SYEDAKSPLVASKIHYENIEMDDSGYPIIIDQKYCPNKLCTSKGDADRVTVKDVTFKNIT
GTSATPEAVSLLCSEKKPCEGVTMSDVKIEYSGKNNKTMTVCTHVKVTATGVDKANTCDA
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcaggaacgttgcgatgagagtcttgttgctcctggcggtggtgagcgcggca
tatgctgccaaaggcaaggcggagaagaaggagagcgcagatggtccggcggcgtccggt
ccggcggcgtccggtgagggcggggagtacgacatcaccaagctcggcgccaagcccgac
ggcacaacggactgcaccgaggcggtggaggaggcatgggcctcggcatgcggtagcacc
gggaacccgaccatcatcatccccaagggtgatttcctgactggagctctgaatttcacg
gggccgtgcaagggcgacggactcaacatcaagctggaaggcaacctgctagcttccaac
gacctggccaagttcaagtctaactggatcgagatcatgcgcgtgaagaagctctccatc
accggcaaaggcaacatcgacggtcagggcaaggccgtctggaccaaaaacagctgccaa
aagaactacaactgcaagatattgccaaactcgttggtgctggacttctgcgacgacgcg
ctcatcgaaggcatctctatcatcaattccaagttcttccacatgaacatcttccagtgc
aagggcgtgaccgtcaaggacgtgaaggtgaacgcgcccggggacagccccaacaccgac
ggcatccacatgggcgactcgtccaatgtcagcatcatcgacaccaccatcggcgttggc
gacgactgcatctccattggccccggctccacacaagtcaacatcagcggcgtgacctgc
ggcccaggccatggtatcagcattggcagcctcgggaggtacaaggacgagaaggacgtg
accgacatcaccgtcaagaactgcgtgctcaagggctccaccaatggcctccgcatcaag
tcgtacgaggacgccaagtcgcccctcgtagcatccaagatccactacgagaacatcgag
atggacgactcgggctacccgatcatcatcgaccagaagtactgccccaacaaactttgc
acctctaagggcgacgccgacagggtcaccgtcaaggacgttaccttcaaaaacatcacc
ggcacctccgccacccccgaggccgtcagcctgctctgctccgaaaagaagccctgcgaa
ggcgtcacaatgtccgacgtcaagatcgagtactccggcaagaacaacaagactatgact
gtctgcacccacgtcaaggtcaccgccacgggagtcgacaaggccaacacatgcgacgcc
tga
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