Triticum dicoccoides (wild emmer wheat): 119364317
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Entry
119364317 CDS
T07278
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase-like
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tdc03016
]
119364317
Enzymes [BR:
tdc01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
119364317
Transfer RNA biogenesis [BR:
tdc03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
119364317
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TraT
Motif
Other DBs
NCBI-GeneID:
119364317
NCBI-ProteinID:
XP_037485672
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Position
2B:complement(474484174..474487747)
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AA seq
624 aa
AA seq
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MEDIEDVLGPAGFAGGGAPPGLRLPLSTVAVKPKRRSYKLLQTQAQPDARIPGTQTIYVK
TFGCSHNQSDSEYMSGQLSAFGYAITEEPEGADLWLINTCTVKNPSQSAMSTLISKCKTA
NKPLVVAGCVPQGSRDLKELEGISIIGVQQIDRVVEVVEETLKGHEVRLLSRKTLPSLDL
PKVRKNKFIEILPINVGCLGACTYCKTKHARGHLGSYSIDSLVDRVKIVVSEGVREIWLS
SEDTGAYGRDIGTNLPNLLNAIVAELPADRSTMLRIGMTNPPFILEHLNEIASVLRHPCV
YTFLHVPVQSGSDAVLKAMNREYTVSEFRMVVDTLCELVPGMQIATDIICGFPGETDEDF
VETVNLIKEYQLPQVHISQFYPRPGTPAARMKKVPSIEVKKRSRELTSVFEAFSPYEGLK
GKVERIWITEIATDGVHLVGHTKGYIQVLVIAPDSMLGTSADAKITSVGRWSVFGEVVEG
TVAIKEASPQQNSAEVQVENRPNHVEEAACSTNTCDSCACSGAESTAQQCTQRCEGPSDA
PTNCGDATRQETPQSTLVRRNVEGAGKTSGSDTEKSRGDDQQINVITRRALNIDRILWGG
LAVSFATTVAILVLLTCKIFYTSS
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggaggacatcgaggacgtgctgggacctgccggatttgccggcggcggagcgcctccc
gggctccgcctacccctctccactgtcgccgtcaagcccaagcgcaggtcgtacaagctc
ctgcagacgcaggcccagcccgatgcccggatcccaggcacgcagacgatatacgtcaag
acattcgggtgctcacataaccagagtgacagtgagtacatgtcggggcagctctcggcg
tttggatatgcaattactgaagagcccgaaggagctgatttgtggctaattaacacatgc
actgtgaaaaatccaagtcaatctgccatgtcaactctcatatcaaaatgcaagacggca
aacaagccactggttgtagctggctgtgtgccacaaggaagccgggatctgaaggagctt
gaaggtattagtataataggagtgcagcagatagatcgggttgttgaagtagttgaggaa
actttaaaagggcatgaggttcggttgttgagtcggaaaacactgccctcacttgattta
cccaaggttcgaaagaataaatttattgagatccttccaataaatgttgggtgtctaggc
gcttgcacttactgcaagacaaagcatgctcgtggtcatcttggaagctattctatagac
agcttggtagatcgtgtgaaaattgttgtctcagaaggtgttcgtgagatatggttgagc
agtgaagatactggtgcttatggtagggatatcggtacaaatcttccgaatctcttaaat
gcaattgttgctgagcttcctgcggacagaagcacaatgcttcgcatagggatgacaaat
cctcctttcatactggagcatttgaatgagatagctagtgttttgcgccatccttgtgtt
tatactttccttcatgttcctgtgcaatcaggaagtgatgctgttttaaaggcgatgaac
cgtgaatacactgtcagtgagttcagaatggtagttgatactctctgtgagcttgtcccg
ggcatgcaaattgccacggatattatttgtggctttcctggcgaaactgatgaagatttt
gttgaaacggttaaccttataaaagagtatcagttacctcaagttcacatatcacagttt
tatcccagaccaggaacacctgctgctaggatgaagaaagtgcctagcattgaagtgaaa
aaacgaagccgtgagttgacctcagtttttgaagctttttcaccatacgaaggactgaaa
ggcaaagtggagaggatatggattactgaaatagctaccgatggtgttcatttggttgga
cataccaaaggatatatccaggtccttgtcattgctccagatagtatgctaggaacatca
gctgatgcgaagatcacatctgttggaagatggtctgtatttggtgaagtggtagaagga
accgttgcaataaaggaagcatcgcctcaacaaaattctgctgaagtgcaggtagaaaac
aggccaaatcatgtggaggaagccgcttgttctaccaacacctgtgattcctgtgcatgc
tcgggtgcagaaagcacggcacaacaatgtacacagcgatgtgaaggtccatctgatgca
ccgacaaattgtggtgatgctactcgtcaggaaacacctcaatctacgcttgtcagaaga
aatgtagagggtgcagggaaaacaagtggaagtgatacagaaaaatccagaggggacgat
cagcagataaatgtgattaccaggagagcactaaacattgacaggattctttggggtggt
ttggccgtaagctttgccacaacagtggccatacttgtgctgcttacctgcaagatattt
tacacgtcctcctaa
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