Candidatus Thiocaldithrix dubininis: QJT80_00760
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Entry
QJT80_00760 CDS
T09759
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
tdu
Candidatus Thiocaldithrix dubininis
Brite
KEGG Orthology (KO) [BR:
tdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tdu03009
]
QJT80_00760 (rimO)
Enzymes [BR:
tdu01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
QJT80_00760 (rimO)
Ribosome biogenesis [BR:
tdu03009
]
Prokaryotic type
ribosomal protein modification factors
QJT80_00760 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
DUF5005
Motif
Other DBs
NCBI-ProteinID:
WGZ91015
UniProt:
A0AA95H7R6
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All DBs
Position
152357..153670
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AA seq
437 aa
AA seq
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MKQAQPRVGFVSLGCPKALVDSERILTQLRAEGYAISGSYDEADLVVVNTCGFIDSAVQE
SLEAIGEALDENGKVIVTGCLGANADKVLAQYPNVLAVTGAHAYEAVMQSVHQHLPPLHD
PYQDLIPPQGVRLTPRHYAYLKISEGCNHRCSFCIIPSLRGDLVSRPIGDVMQEAENLVN
AGVKELLVISQDTSAYGIDVKYRTGFWKGRPIKTHSQQLAEALGELGVWTRLHYVYPYPH
VDHLLPLMAEGKILPYLDIPFQHASPDVLKNMRRPAHAEKVLERIHKWREICPDIAIRST
FIVGFPGETDEDVGVLLDFLEEAELDRVGAFAYSAIEGAPANALPGAVPEEEKQNRLEAF
MEVQAEISAAKLSRLIGKEFKVLIDEAVDGVSLGRTYRDAPEIDGQVTIEGVELPVGEFV
NVRITHADEHDLWAEPL
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaagctcaaccccgcgtcggttttgttagcctcggttgtcctaaagccttagtc
gattccgagcggattttgacgcaattacgcgccgaaggttatgccattagtggtagttac
gatgaggcggatttagtcgtcgtcaacacttgcggttttattgattctgctgtgcaagaa
tcgttagaagccataggcgaagccttagacgaaaacggtaaagtcattgtgacgggctgt
ttgggggcgaatgcggataaggtcttagcgcaatacccgaatgtattagcggtgaccggc
gcacatgcctatgaagcggttatgcaatcggtgcatcaacatttgccaccgttacacgac
ccgtatcaagatttaattccaccgcaaggcgtgcgtttaaccccgcgccattatgcgtat
ttaaagatttccgaaggctgcaatcatcgttgtagtttctgcattattcccagcttacgt
ggggatttggtctcacgcccgattggcgatgtcatgcaagaagccgaaaacttggtgaac
gcaggtgtgaaagaattattggtgatttcgcaagacaccagcgcgtatgggattgatgtg
aaatatcgcacgggtttctggaaaggtcgcccgattaaaacccattcgcagcaattagcc
gaagccttaggggagttgggtgtatggacacgtttgcattatgtatacccttatccgcat
gtagatcatttattgccgctgatggcggaaggtaaaattctgccgtatttggatattccc
tttcagcacgccagccctgacgttttaaaaaatatgcggcgtccggcacatgcggaaaaa
gtcttagagcgcattcataaatggcgggaaatatgcccagatattgcgattcgtagcacc
tttatcgtcggctttccaggtgaaacggatgaagacgttggcgtattgctggatttctta
gaagaagctgaattagatcgggtcggtgcatttgcttattcagcgattgaaggtgctcca
gccaatgcgttaccgggtgctgttcctgaagaggaaaagcaaaaccgcttagaagccttt
atggaagtacaagcggaaatcagtgctgccaagctgagccgtttaatcgggaaagaattc
aaagttctgattgatgaagcggtagacggggtgagcttagggcgaacttatcgggatgca
ccagaaattgatgggcaagtaacgattgaaggggtggaattgccagtcggggaattcgtc
aacgtgcgtattacccacgccgacgaacatgatttatgggcagagccgctttga
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