Triplophysa dalaica: 130407625
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Entry
130407625 CDS
T09616
Symbol
grin1a
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1a isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
tdw
Triplophysa dalaica
Pathway
tdw04020
Calcium signaling pathway
tdw04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
130407625 (grin1a)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
130407625 (grin1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tdw04040
]
130407625 (grin1a)
Ion channels [BR:
tdw04040
]
Ligand-gated channels
Glutamate (ionotropic)
130407625 (grin1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
DUF732
Motif
Other DBs
NCBI-GeneID:
130407625
NCBI-ProteinID:
XP_056586673
EnsemblRapid:
ENSTDLG00000016380
LinkDB
All DBs
Position
19:4248528..4278629
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AA seq
950 aa
AA seq
DB search
MRLLLLIAFFSCSCVRGGCEPKIVNIGAVLSQKRYEQVFKDAVSQANQVFGREKFKLTAI
SVTHKANAIQMALSVCEDLISSQVYAILVSHPAQSNDHLTPTPVSYTAGFYRIPVVGLTT
RMSIYSDKSIHLSFLRTVPPYSHQAHVWFDMMREFRWNHIILIVSDDHEGRAAQKRLETL
LEERETKNKKRNYENQDQLYDNKRGPKAEKVLQFNQETNLTALLLEAKELEARVIILSAS
EEEAAAVYKTARLLNMTGSGYVWLVGEREISGKALSEAPDGLIGLQLINGKNESAHISDA
VAVVAQSIQELFEKENITEPPRGCVGNTNIWKTGPLFKRVLMSSKYPEGLTGRVEFNDDG
DRKYAHYSIQNFQKNRLIQVGIYNGTQVVMNKQRKIIWPGGETERPRGFQMSTRLKIVTI
HQEPFVYVKPTTLEGTCKEEYTPNGVLIKKVICTGPNETIPGNPSGRPIVPQCCYGFCVD
LLIKLAMTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLGGLADMIVAPLTINN
ERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLD
RFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAM
IIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELST
MYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIG
MRKDSPWKQNVSLAILSSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLVA
GGIAAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQPSSSVETQDDRKSGRTDS
DPKKKPSFRSISTNLASSIKRRRSSKDTQFPPTDITGQLNLSDPSVSTVV
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgcttctgttaatcgcgtttttctcctgctcctgcgtgcggggcggctgcgaa
cccaagattgtgaacatcggggccgtcctgagccagaagagatatgagcaggtgtttaaa
gatgccgtcagccaggcgaaccaggtgttcggacgggaaaaattcaagttgaccgccatc
tctgtcactcacaaagccaatgcgattcagatggcgctgtcggtgtgcgaggatctcatt
tccagtcaggtgtacgccatccttgtaagccatccagcacaatctaatgaccatctcact
cccacgcccgtgtcctacacagcgggattctacaggatccctgtagtggggctcaccacc
aggatgtccatttattcagacaagagcatccatctctcgttcctacgtacagtgccgccc
tactctcaccaggcacacgtgtggtttgacatgatgcgtgagtttcggtggaatcacatc
attctaatcgtcagtgacgaccatgaaggccgtgctgcacagaaaagactagaaacgctg
ctggaggagagagaaaccaagaataaaaaaaggaactatgagaaccaagaccaactgtat
gacaacaaaagaggacctaaggccgagaaagtgcttcagttcaaccaggagactaacttg
accgctctgctcctggaggccaaagagctggaggcccgagtgatcattctgtctgccagt
gaggaagaagcagccgccgtgtacaaaacagcgcgcttactcaacatgacaggctcaggc
tacgtttggctggtgggggagcgcgagatttccggtaaagctttgagcgaggcccctgat
ggcctgatcggccttcagcttatcaacggcaagaatgaatccgcgcacatcagcgacgcc
gttgcagtcgtagctcaatccatccaggagctcttcgagaaagaaaacatcacggaaccg
ccgaggggctgcgtgggcaacaccaacatctggaaaaccgggccactctttaaaagggta
ttgatgtcatcgaagtatccggagggcctgacaggacgtgttgagtttaatgacgacggc
gacagaaaatacgctcattacagcattcaaaacttccagaagaatagactgattcaagtt
ggcatttacaacggaacacaggtagttatgaacaaacagaggaagatcatttggccggga
ggtgaaaccgagagaccgagaggattccaaatgtctactcgccttaagattgtgactatt
catcaggaaccctttgtgtatgtaaaaccaaccacgttggagggaacctgcaaggaagag
tacacaccgaatggagtcttaataaaaaaggtgatctgcactggaccaaatgagaccatc
ccaggtaacccgtcaggacgcccaatagtaccccaatgttgctatggattttgcgttgat
ctcttgatcaagctggcgatgaccatgaacttcacctacgaagtacacctggtggcagat
gggaaattcggaacacaggaaagagtgaataacagtaacaagaaggaatggaatggcatg
atgggagagctcctgggtggcttggccgacatgattgtagctccgttgacgattaataac
gaacgagcccagtacatcgaattctccaaacctttcaaatatcagggactcactattctt
gttaaaaaggaaattccccgcagtacgctggactcgtttatgcagccgttccagagcaca
ctgtggctactggtgggtctatcggtgcatgtggtggcggtgatgctttacctacttgac
cggttcagcccgtttggaaggtttaaagtaaacagcgaagaagaagaagaagacgccctc
accttatcttccgctatgtggttctcctggggagtcttgttgaactctggaatcggagaa
ggtgccccgcgtagtttttcagcaagaatcttgggaatggtgtgggccggcttcgctatg
ataattgtagcatcctacactgccaacctggctgccttcctggtgttggatcggcctgag
gaacgcatcaccggcatcaatgacccgaggttgaggaacccatcagacaagttcatctat
gccacagtgaagcagagctcggtggatatttacttccgccgtcaagttgagctgagcacc
atgtaccgccacatggagaagcacaactacgagagcgcggcggaagccattcaggctgtc
cgggacaacaagctgcatgctttcatctgggactctgcggtgctggagtttgaagcctcg
cagaagtgcgacctggtgaccacgggagagctgtttttccgttcgggctttggcataggc
atgcgcaaggacagcccctggaaacagaatgtgtccctggctattctcagttcccatgag
aatggcttcatggaggaccttgataaaacctgggtgagataccaggagtgtgattcaaga
agcaatgccccagccacactgacttttgaaaatatggcaggtgtcttcatgcttgtcgct
ggtggcattgcggccggaatcttcttaatcttcattgagatcgcatataagcgccataaa
gacgcccgcaggaagcagatgcagctagcctttgcggccgtcaacgtttggaggaagaac
ttacagccctcttcctctgtagagactcaggatgataggaaaagtggtagaacagacagc
gacccaaaaaagaaaccctcttttaggtccatcagtaccaacctggcctccagcatcaag
agacgtaggtcctccaaagacacgcaattcccaccaacagacattacgggccaactcaac
ttgtctgacccgtctgtcagcacggtggtgtga
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