Triplophysa dalaica: 130412114
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Entry
130412114 CDS
T09616
Symbol
grin3a
Name
(RefSeq) glutamate receptor ionotropic, NMDA 3A
KO
K05213
glutamate receptor ionotropic, NMDA 3A
Organism
tdw
Triplophysa dalaica
Pathway
tdw04020
Calcium signaling pathway
tdw04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
130412114 (grin3a)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
130412114 (grin3a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tdw04040
]
130412114 (grin3a)
Ion channels [BR:
tdw04040
]
Ligand-gated channels
Glutamate (ionotropic)
130412114 (grin3a)
BRITE hierarchy
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
130412114
NCBI-ProteinID:
XP_056593231
EnsemblRapid:
ENSTDLG00000020137
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All DBs
Position
22:713113..726721
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AA seq
1116 aa
AA seq
DB search
MKGSWMRCALGRLVWLCFFAPSALIVFFVVPASLAHPQPCQILKRIGHTVRVGALHLQPR
VFRHNPLWATEMDWGTGRETGEEWDIVIQSELDHQWRGIRTKSSVNNPHRTSKSKTIFKQ
VDTETVFLPRDSVIFAMETLNRVEGLLPYNLTLEIVMAVEAGLGELPAFSFSSSSPASAD
PVSFLQSVCHTVIVQGVSAIIAFPQNRNELVKLEFISSTLQIPVISVVQNEFKRQSQNSL
HFQMVMRNPQTPEAELIFSLLSMNNWYDVSLVMCQQMNISDFIFLLHNNSKFHLGTVIKI
STNISSKIDFPTYLQGQLGSIKDSTSTVVTFGCDIQDIRKIFATVAKFGRIIRNYHWVIG
DSQNVEELTTEELPVGLLAHGRMSEPSLDHYVQDALEFVARAVGSATTVSPELALIPGIT
NCLVIEAKNLTSGKFLSRFMAQTSFDGLSGYINVREESTILSETHHFIWNLQHDPIGKPM
WTRLGSWKQSKVVMDYGVWPNKRQSQQGADWRQSSRLHLRVVTLVEHPFVFTRDVDEDGL
CPAGQLCLDPLTNDTALLESLFHGLQGANKTVPMEYKKCCYGYCIDLLEKLAEDMEFDFD
LYIVGDGKYGAYKNGRWTGLVGDLMSGAAHLAVTSFSINSARSQVIDFTSPFFSTSLGIL
VRTKETAAPIGAFMWPLHWSMWLGIFVSLHVTAVFLTLYEWKSPFGLTPRGRNRDRVFSF
SSALNVCYSILFGRTAAIKPPKCWTGRFLMNLWAIFCLFCLSTYTANLAAVMVGKKTYEQ
LSGIHDPKLHHPSQGFRFGTVRESSAEDYVKKSFPEMHEYMRRYNAPTTPDGIDHLKDDP
QKLDAFIMDKALLDYEVSIDADCKMLTVGKPFAIEGYGIGLKQNSPLSSNISELVSQYKS
DGFMDLLHDKWYKVVPCGKRSFAVTETLQMGIKHFSGLFVMLCIGVALSLLTTLGEQIVH
RWVIPRMLKSSQHKYCLHTSQRLHRALNPTFKEDKVQTVAKQEKSCNVENNQQMPWNSLG
TSNCNRRKLSNQEGQQNDLECSHCKELLPQQENRQLPSQTTSNGRTDLLGLGLNPIVQEL
TDLETQIQLIKKQLQLAIKKKKDLEQYQKTKTSMEP
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgaagggctcttggatgcggtgtgcgctgggcaggttggtgtggctctgtttttttgca
ccgagcgctttgatagtgttctttgtggttccagcatctctagcacatccccaaccatgt
cagattctaaagagaatcggacatacggtgagagtaggagctctgcaccttcaacctcga
gtatttaggcacaatcccctctgggctacagaaatggactggggcacaggcagagaaact
ggagaggagtgggacatcgttatccaaagtgaactagaccatcaatggaggggcatcagg
actaaaagctcagtaaataacccccacaggacctcaaaaagtaaaacaatattcaaacaa
gtggataccgagactgtattcctacccagagactctgttatattcgccatggagaccctt
aatagagtggaagggcttttaccttacaacctgaccctggagatagtcatggctgttgaa
gccggacttggagaattacctgctttttcgttttcctcttcatcgcctgccagtgcagat
cctgtgtcgttcctgcaaagcgtttgccacactgtcatcgtgcaaggagtttctgccatc
attgcgtttccacaaaacaggaatgaattagtgaagttggaatttatttcgtccacgtta
cagataccagtcatcagcgtcgtgcagaatgagttcaaacgccagagccagaactcactc
catttccagatggtcatgcgaaatcctcaaactcctgaagcagagctcatcttctccctt
ctgtccatgaataactggtatgacgtcagtttggtgatgtgtcaacagatgaacatttcc
gactttatctttttgctccacaacaactccaaatttcatctgggcactgttattaagatt
tccaccaacattagctccaaaattgactttccgacttatctgcaaggtcaactggggtca
atcaaggactcaacttctacagtagtgacctttggatgtgacatacaggatatacgcaaa
atctttgctaccgttgcaaagtttggtcggataattcgtaattatcactgggttataggt
gactctcaaaatgtggaggagttaacgacagaggaactgccagtgggtctacttgcacat
ggccgtatgagtgagccctcgctggatcattatgtccaggatgctttggagtttgtggcg
agagcggtggggtctgctaccactgtgtctccagagctggcactgatacccggcatcaca
aactgtctggtgattgaggctaaaaatctaacatcaggaaaatttctctccagattcatg
gcccagacatcatttgatggcctgagtggctacataaacgttcgagaggaatctaccatt
ctctctgaaacccatcattttatatggaatctacagcatgacccaattggcaagcccatg
tggacgcgtctgggcagctggaagcaaagcaaagtggtcatggattatggagtttggcca
aataagagacagtctcaacaaggggcagactggcggcaatcctctcgcctacacttacgc
gtagtcaccttggtagagcacccatttgtcttcacccgtgatgttgacgaggatggttta
tgtcctgctggccagttgtgccttgaccccttaacaaatgatacagcgttgttggaaagt
ctttttcatggtttgcaaggtgccaataaaactgttcccatggaatataaaaaatgttgc
tatggttattgcattgatcttctggaaaagctggcagaggacatggagtttgactttgac
ctctacattgtgggagatgggaaatatggtgcttacaagaacggtcgctggacaggtctg
gtcggggacctcatgagtggggcggcacacctggctgtcacttctttcagtatcaactcg
gcacgcagtcaggtcatcgactttaccagccccttcttctctaccagtctaggaatcctt
gtcaggactaaagaaacagcggcacctattggtgccttcatgtggcccctacactggagt
atgtggttaggaatatttgtatctttacatgttacagctgtgtttcttaccttgtatgag
tggaaaagccctttcggcttaaccccaaggggtaggaacagggacagagtcttctctttt
tcctcagcgctaaacgtttgctactcaatcttgtttggcaggacagctgctattaagccg
ccaaaatgttggactggcagattcctcatgaatctctgggccatattttgtttgttctgc
ttgtctacctacacagctaatctcgctgctgtaatggttggtaagaaaacgtatgagcag
ctctcgggtatacacgatcccaagcttcatcatccatcacaagggttccgctttgggact
gttcgggaaagcagtgctgaagattacgtgaaaaaaagctttccggagatgcatgagtac
atgaggcgatataatgcccctacaacccctgatgggatagaccaccttaaagatgatcct
cagaagctagatgctttcataatggacaaagctcttttagactatgaagtatctattgat
gcagactgcaagatgctgactgtgggaaagccatttgcaattgaaggctacggtattggg
ctcaaacagaattctcctctttcttcaaatatctctgagttggtcagtcagtataaatca
gatggatttatggacttgctacatgataaatggtacaaggtggtcccctgtggtaaaaga
agctttgctgtgacagagactttacagatggggataaagcacttctcagggttatttgtc
atgctatgcattggagtcgccctttccctcctcaccacactcggggaacaaatcgtccac
cgctgggtgatacccaggatgctgaaatcttcacagcataaatattgtctccacactagt
caaagattacatcgagcacttaacccgactttcaaagaagacaaagtacagactgtggca
aaacaagagaaaagctgcaacgttgaaaacaaccagcaaatgccatggaactctttggga
acatcaaattgcaatcgtcggaaactgtccaatcaagagggtcaacaaaacgacctggaa
tgttcacactgcaaggagctcctgccccaacaagaaaatagacaacttccgtcacaaacc
acctccaatgggagaacagaccttcttggcctgggcctaaacccaatagtgcaggaactt
acagacctggaaacacaaatccagctcatcaaaaaacaactgcagcttgccataaagaag
aaaaaagacctggagcagtatcaaaaaactaagacttcaatggagccctag
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