Triplophysa dalaica: 130417859
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Entry
130417859 CDS
T09616
Symbol
grin3ba
Name
(RefSeq) glutamate receptor ionotropic, NMDA 3B
KO
K05214
glutamate receptor ionotropic, NMDA 3B
Organism
tdw
Triplophysa dalaica
Pathway
tdw04020
Calcium signaling pathway
tdw04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
130417859 (grin3ba)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
130417859 (grin3ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tdw04040
]
130417859 (grin3ba)
Ion channels [BR:
tdw04040
]
Ligand-gated channels
Glutamate (ionotropic)
130417859 (grin3ba)
BRITE hierarchy
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
130417859
NCBI-ProteinID:
XP_056599669
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All DBs
Position
3:complement(8911146..8947549)
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AA seq
1139 aa
AA seq
DB search
MNLMLFRFLTYLHVGLQVALQMFIYPCHLHPQPCHILARIGHTVRLGALLPTRQQSRIQG
ALNRALVHLRQSGNNFLPYNLSLEVLSREPLNGDPESIFRCVCQDIVVQGVSAVLAFPQR
HEELVQVEFMSSFLEIPFISILEQGEPLKTQNRFHLQMMTRTAPTRLAELLLAVLLKGGW
QGGAATLCPEGGNTGMPEELEQLGHLGVDGEHWHLWETLNLSRLVTTTAEEEKELLTEDK
VMEFLSQLLSRTPSAPASSMVLFSSDPECTATVLRSGHRLSFAFPPMQWIMGYPLSLDSL
QSIGSPLGLLAYGEVNRKPLNFYIRDALQLIGRAVYAATMVRPDLALIQNMVNCFDKPNK
HELPSSGQYLARFLSNTSFMGLTGPVRVQRSLSRVLTSQRYHIWSLQRDPLGQPSWVTVA
NWQSGQLEVEEQGLWPGATQRQREMGPGIRLGGRWQAGLPVAGSRLRVVTLVEHPFVFTR
EVDDEGQCPAGQLCLDPQTNSSEVLNKLFRELEQTNISSLPTDIRKCCYGYCIDLLEKLA
EDMHFEFDLYIVGDGKYGAWKGGQWTGLVGDLLSGVADMAVASFSINSARSRVIDFTSPF
FSTSLGILVRSKDTAAPIGAFMWPLHWSMWVGIFVSLHITALFITLYEWNSPFGMTPHGR
NRIRVFSYSSALNLCYAILFGRTVASKTPKCWTGRFLMNLWAIFCLLVLSSYTANLAAVM
VGEKTFEEVSGIHDVKLHHPSLGFRFGTVRESSAEDYVKKSFPEMYEYMRRFNKPTTPDG
VSTLKTDPPQLDAFIMDKALLDYEVSIDADCKLLTVGKPFAIEGYGIGLPQNSPLTRNVS
EYVSRYKSDGCMDMLHDKWYKVVPCGKRVFAVTETLQMGIQHFSGLFVLLCVGVAGALLT
LLGEHAFFRFILPHLRNQQRFKYWLHTSQKIHRALNMGCEDDRKSEAESTIRCSTLCLSE
NCNLHRLPSAAPTSSSPQPSTSSASTSSSTTKWNNQSAKAGREAKDHNKRVHFNLETLNS
YQLQAAPPGPERSRRGLVGSPPTQLCSNGGPNLSLSLVLSPPACPGGSSPWEEELRELQG
RIEEFRGELRAALARRAELQRNLVRQRLSQSKTVSSSNPAETSAPSNTNTLTKDINRGR
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaatgctcttcagattcttgacctaccttcacgtcgggctccaggtcgctctt
cagatgtttatttacccttgtcatttgcatccccaaccttgtcacatcttggcacgcatc
ggtcacacggtgcgtttgggtgcgctcttgccgacccgccagcagtccaggatacagggc
gcgctcaaccgcgccttggtccacctccggcaaagtgggaacaacttcttaccgtacaat
ctgagcttggaagtgttgtcccgagaaccgctcaatggagacccggagtccattttcagg
tgcgtgtgtcaggatatcgttgtgcaaggagtctccgccgtgcttgcgttcccacagaga
cacgaggagctcgtacaagtggagtttatgtcttcgtttttggaaatacctttcatcagc
atccttgaacagggtgaacctcttaagactcagaaccggttccacctgcagatgatgacg
cgcacggcccccaccagactggcggagctgctgttagcggtgttgctgaaggggggctgg
cagggcggggctgccactctttgtccggaaggtggcaacacgggcatgccggaagagttg
gaacagctgggtcatctgggcgtggatggagaacactggcacctttgggagaccctcaac
ctatccagactagtaactacaacagcagaggaggaaaaagaactattgacggaagataag
gtgatggagtttctctcacagctcttaagcaggactccatctgccccagcgtcctccatg
gttctcttcagctccgacccagaatgcacggccactgtgctacggagcggccaccggctg
agttttgcgtttcccccgatgcagtggattatgggatacccacttagtttggattctcta
caatctatcggctctccccttggccttctggcttacggggaggtgaatcgcaaacccctg
aacttctacataagagatgccctccagctgattggcagggctgtgtatgctgcgaccatg
gtgagacctgacctggcgcttatccagaacatggtcaactgctttgataaacccaataaa
catgagttgccctcctctggacagtacctcgccaggttcttgtcaaacacttccttcatg
gggctgacaggcccagtgcgagtacagcgctctctctccagggttcttacctcccagcgt
taccacatctggagtctacagcgagaccctctaggccagcccagttgggtgaccgtggca
aactggcagtcaggccagctggaagtggaggaacaggggctgtggccaggcgcgacccag
cgtcaacgggaaatgggcccagggatcaggctaggcggccgttggcaagcgggcctccca
gtggcagggagcagattgcgagtggtgaccttggttgagcatccgttcgtattcacacgg
gaggtggatgatgagggccaatgtccggcaggtcagctgtgccttgaccctcaaaccaac
agctctgaagtcctcaacaagctgtttagagagctggagcagacgaacatcagttcactg
ccaactgacatccgtaaatgctgctatgggtactgcatcgatctgctggagaagttagct
gaggacatgcactttgaatttgacctgtacatcgtgggtgatgggaaatacggcgcatgg
aaaggaggtcaatggaccgggctggtgggcgatctgctcagtggtgtagctgatatggcc
gtcgccagctttagcatcaactcggctcgaagccgagtgatcgactttacgagtcccttc
ttctccactagtctgggaatcctggtgcgcagcaaggacacggccgcacccatcggtgcc
ttcatgtggccccttcattggtcaatgtgggtgggcatctttgtgtccctgcatattacc
gcactcttcattacactgtacgagtggaacagtccgtttggcatgacgccgcacggacgc
aaccgcatcagggtcttctcgtactcgtctgctctgaacctctgctacgcaatcctgttt
ggtcggactgttgccagtaaaacaccaaagtgctggacaggacggttcctcatgaatctt
tgggccatattttgcctgctggttttgtccagctacacggccaacctagcagctgtcatg
gtcggggagaagacctttgaagaggtgtcaggaattcacgatgtcaagctccatcacccg
tctctagggtttcgctttggcacagttcgagagagcagtgctgaagattatgtgaagaag
agcttccctgagatgtacgaatacatgaggcgcttcaacaagcccaccactccggatgga
gtttctacactgaagacagatcctcctcagctagatgctttcatcatggacaaagctctg
ctagactatgaggtttctatagatgcagactgcaaactcctgactgtaggcaaaccattt
gctattgaaggctacgggatcgggctgccccagaactctcccctcacaaggaacgtgtcc
gaatacgtcagccgctacaaatccgacggctgcatggacatgctacacgacaaatggtac
aaagtggttccctgtggaaagagggtttttgcagtgacagagacgctgcagatgggcatc
cagcatttttcggggctgtttgtgctgttatgcgtgggggtggctggggctttgctcact
ctgttgggggaacacgctttcttcagattcatcctgcctcacctccgaaaccagcagaga
tttaaatactggcttcacactagtcagaaaatccatcgtgcattaaacatgggttgtgaa
gatgacagaaaatcagaggctgagagcactatcagatgttccaccttgtgcctgtcagag
aactgtaacctacaccgcctgccatcagccgcccccacctcctcgtcccctcagccttcg
acctcctccgcttccacttcctcttccacaaccaaatggaacaatcagagcgcaaaggcc
ggacgagaggccaaagaccataacaaacgtgtccacttcaacctggagacgctcaacagc
taccaactccaagccgcgccccccggtcccgagaggagccgtagagggctggtgggtagt
ccgccaacccagttgtgttccaacggtggccccaatctcagtctcagcctggtgctctca
cctccggcctgcccgggaggctcgtcgccgtgggaagaagaactgagggagctgcagggg
aggatcgaggagtttcgcggagagttgagagctgccctggccaggagagccgagctacag
cgaaacctggtcagacaaaggctcagccagtccaaaacagtctcatcctctaatcctgcc
gagacgtcggccccttccaacaccaacaccctgaccaaagacatcaacagaggcaggtga
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