Triplophysa dalaica: 130419057
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Entry
130419057 CDS
T09616
Symbol
notch1b
Name
(RefSeq) neurogenic locus notch homolog protein 1b
KO
K02599
Notch 1
Organism
tdw
Triplophysa dalaica
Pathway
tdw04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
130419057 (notch1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_CA
Ank_2
Ank
EGF_2
Notch
NOD
NODP
Ank_3
Ank_5
Ank_4
EGF_3
DL-JAG_EGF-like
JAG1-like_EGF2
Motif
Other DBs
NCBI-GeneID:
130419057
NCBI-ProteinID:
XP_056601437
EnsemblRapid:
ENSTDLG00000021911
LinkDB
All DBs
Position
4:complement(3398420..3440893)
Genome browser
AA seq
2493 aa
AA seq
DB search
MHLFLVKLIPLISLVTLTQGLECSEKCLNGGTCELTPDGRGECKCPELFAGPACQFRNPC
YHSPCRNSATCRVITQVNKVDFVCNCRLGYSDRLCLTPTDNVCLSSPCRNGGTCDLTSIH
NYKCKCPPGWSGKNCLQADPCASNPCANAGQCNPFDSDYICHCTPFFSGQTCRQDVNECA
QIPSPCKNGGVCENEVGTYRCSCPAEYTGKHCETLYQPCNPSPCLHGGTCVQKGETSYEC
SCLPGFSGQNCEENIDDCPDHRCLNGGTCVDGVNTYNCQCKPEWTGQFCTEDVNECDLMP
NSCQNGGTCLNTHGGYNCVCVNGWTGDDCSENIDDCADAACHAGATCHDRVASFLCECPP
GRTGLLCHLKDACISNPCQKGSNCDTNPVNGRAICTCPLGYVGPACDQDVDECSLGANPC
EHAGKCINTKGSFQCKCQQGFVGGRCELDVNECLSNPCQNDATCLDQIGGFHCICMAGYK
GFFCQINTDECASMPCLNNGKCIDKINNYQCECPTGFSGSQCQFDIDECASTPCKNGAKC
IDGPNMYTCQCTEGYTGQHCETDVDECLSNPCHYGTCKDGLASFTCFCSAGYTGRLCETN
INECLSQPCQNGGTCQDWENAYLCVCLKGTAGVNCEVNIDDCKSNPCDYGRCIDKINGYE
CACESGYSGKMCNINIDECAINPCHNGGTCVDGVNGFTCLCREGFHDTTCQSQLNECLSN
PCIHGHCEDKINGYNCICDSGWSGINCDINNNECESNPCMNGGTCKDMTSGYVCTCRAGF
SGPNCQTNINECASNPCLNQGTCIDDIAGYKCNCFLPYTGENCETLLAPCSPKPCKNGGV
CKESEDYESFSCMCPEGWQGQTCEVDINECVKNPCRNDATCQNSIGSYKCSCKSGYTGRN
CETDIDDCKPNPCSNGGFCKDGVDTFVCTCLPGFRGNRCEEDINECESNPCKNGANCTDC
VNSYTCTCPPGFSGIHCENNTPDCTESSCFNGGTCVDGINSFTCLCPTGFTGNYCQHDIN
ECDSRPCMNGGTCQDSYGTYKCTCPQGYHGHNCQELVNWCKPSPCKNGGFCRQSGTKYSC
QCQTGWTGLYCDVPSVSCEVAAKQQGVDVAGLCRNSGQCLDAGNTHYCHCQAGYTGSYCE
EQVNECIPNPCQNGATCTDYLGDYSCECVPGYHGVNCSMEINECLSQPCQNGGTCIDLIN
TYKCSCPRGTQGVHCEINIDDCTPFTDPITQEPKCFNHGRCVDRVGGYHCICLPGYVGER
CEGDVNECLSNPCDPRGTHSCTQLTNNFRCECRTGYTGQRCEKVFDGCKGKPCRNGGTCA
VASNTPHGFICKCPPGFTGSTCEYEAHTCGSLHCKNGGTCVSGQKSPKCLCVPAFNGPEC
QDPAEGHCKDNPCYNGGTCEYISEAPYYHCICPSGFNGLFCHILDYSFRGGTGRDITPAP
EVTVSCEVPECFKKKANKICDSTCNNYACDWDGGDCSLNFVDPWQNCSAALQCWLYFNNG
KCDEQCHNAGCLYDGFDCQRLEGQCNPLYDQYCKDHYADGHCDQGCNNAECEWDGLDCDG
NVPEKLAAGVLVLVVHIMPDQLRNNSFGFLRELSRVLHTNVVFRSDGKGELMIYPYYGNE
QELKKHNIKRSLDSWADASGNVLNSVKNGIYNIVVEGGRQRRELDSMQIKGSVVYLEIDN
RQCYQQTSECFQNTNDVAAFLGALASSGNLNVPYYIEAVTSRIEEPPLELYPVYVVLAGL
ALLAFVAVGMVASRKRRREHGQLWFPEGFKTSEPSKKKRREPVGEDSVGLRPLKNSDISL
MDDNLNEWGEEETMDTKHFKTEVQAMLDLDDQTDHRQWTQQHLDAADLRIPSIAPTPPQG
EIENDCMDVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDTTNVINDFIYQGANLHNQTD
RTGETALHLAARYARSDAAKRLLEASADANIQDNMGRTPLHAAVAADAQGVFQILIRNRA
TDLDARMQDGTTPLILAARLAVEGMVEELINCHADVNAVDDFGKSALHWAAAVNNVEAAV
VLLKNGANKDMQNNKEETPLFLAAREGSYETAKVLLEHFANREITDHMDRLPRDIAQERM
HHDIVRLIDEYNLVRSPPMHSASICTTLSPPLCSPNAFMGGMKPSTQSKKARKPSAKGIG
CKDSKDMKVKKKKNPQDGKGNLLDSSAVLSPVDSLESPHGYISDVASPPLMTSPFQQSPS
MTLNQLQGISDSHMGVNHLGMTNKQDLTHMQFDPILPRLTHLPVGGSNGSSGMNGQCEWL
GRIHSGMGQPNQFGALRNTSGHQSNQHGLMTSLHNGHPAATLSQMMNYQGMQNTHLTVQP
HLLQQMQQNIQQRQQQPGIQLQSSNPSGVSQNFIGGDLGGPELQQGTGNSMPIHTIIPQE
TQLLNPSSLGPSMAGTQFLTPPSQHSYSATMDGNTPNHQLQVPEHPFLTPSPGSPDQWSS
SSPHSNMSDWSEGISSPPTSMQSQIGHIPEQFK
NT seq
7482 nt
NT seq
+upstream
nt +downstream
nt
atgcatcttttccttgtgaaactaattcctctgatatcactcgttactttgacgcaaggc
ctcgaatgttctgaaaaatgtctgaatggtggtacgtgtgaactgactccagacgggaga
ggagaatgcaagtgtccggagctgtttgccgggccagcatgccaattccgcaacccctgc
taccactcgccatgcagaaacagtgccacctgccgtgttattactcaggtcaacaaggta
gactttgtctgcaactgtcgcttgggctactcggaccgattgtgcctcacccccaccgat
aacgtgtgccttagctccccgtgtcgaaacgggggcacctgtgatctcaccagcatccac
aactacaaatgtaaatgcccaccgggctggtcaggtaaaaactgcctgcaagccgatcct
tgtgcttcaaatccatgtgccaacgccggtcagtgcaatcccttcgattctgactacatc
tgccactgcacgcccttcttctcaggccaaacctgcaggcaggacgtcaacgagtgcgcc
cagattccgtcgccctgcaagaatggcggcgtgtgtgagaacgaagtgggcacgtatcgc
tgcagctgcccggcagagtacacggggaaacattgcgagaccctctatcagccctgcaac
ccctcaccgtgccttcatggaggaacctgcgtacagaagggggagaccagctatgagtgc
tcctgtttgccaggctttagcggtcagaactgtgaggagaatatagacgactgcccggac
catcggtgtctaaacggaggaacttgtgtggatggagtgaacacgtacaactgccagtgc
aagccggagtggacaggtcagttctgcactgaagacgtcaacgagtgcgatttgatgccc
aattcctgtcagaacggtgggacgtgcttgaacacgcatggtgggtacaactgcgtgtgt
gtgaacggctggactggagacgactgcagtgagaacatagatgactgcgcagacgcagcc
tgccacgcaggagctacctgtcacgatcgggtggcctctttcctctgtgaatgccccccc
ggacgcacaggtctcctgtgtcacttgaaggatgcttgtattagtaatccctgtcagaaa
ggctccaactgtgataccaatccagtcaatggcagagccatctgtacctgtcctctgggt
tatgtcggcccagcctgtgaccaagacgttgacgaatgctcgctaggtgcaaacccttgt
gagcacgccggaaagtgtatcaacacaaaaggttcctttcagtgtaaatgtcagcaggga
tttgtgggaggtcgatgtgaactcgacgtaaacgaatgcttgtcaaacccctgccagaac
gatgctacgtgtttggatcaaataggaggctttcattgcatctgcatggcagggtacaag
ggattcttctgccagatcaataccgatgagtgcgccagcatgccgtgtctcaacaatggg
aagtgcatcgataagatcaacaactaccaatgcgagtgccccacaggattctctgggagc
cagtgccagtttgacatcgacgagtgtgcaagcaccccctgtaaaaatggcgccaaatgt
attgatgggcccaacatgtacacctgccagtgcacagaaggttacactggacagcactgt
gaaaccgacgtagacgagtgtctctccaacccgtgtcattacggcacctgtaaagacggc
ctggcatccttcacctgtttttgcagcgcgggttacacgggccgcctgtgtgagaccaac
ataaatgaatgtctcagtcagccatgccagaacggaggcacatgccaggactgggagaac
gcttacctatgtgtctgcctcaaaggaacagcaggtgttaactgtgaggttaatatagac
gactgcaaaagcaatccctgtgattatggacggtgcattgacaagataaatggttacgag
tgcgcctgtgaatcaggatactcagggaaaatgtgtaatatcaacattgatgaatgtgcc
atcaatccctgtcacaatggcggaacatgcgtggatggagtcaatgggtttacgtgcttg
tgccgcgagggctttcatgacaccacctgtcaatcacaactcaacgaatgcctcagcaac
ccttgtatccacggacactgtgaggataaaatcaatggatacaactgtatttgtgactct
ggctggagcggcatcaactgcgacatcaacaataatgaatgtgaatccaatccctgtatg
aacggaggcacctgcaaggatatgaccagcggttacgtctgcacgtgccgcgcaggcttc
agcggtccgaattgtcaaactaacatcaacgaatgtgcctccaacccctgcctgaaccag
ggaacctgcatcgatgacatagccggatacaaatgcaactgttttctaccatacactggt
gagaactgtgagacattgttggctccgtgcagccccaaaccatgtaaaaatggcggcgta
tgcaaagaatccgaggactatgagagcttctcctgcatgtgtcctgaaggatggcaaggc
cagacatgtgaggtcgacatcaatgaatgcgtcaaaaacccttgtcgaaacgacgctacc
tgtcaaaactcaataggcagctacaaatgcagctgtaagtccggctacaccggccgcaac
tgcgagacggatatcgatgactgcaaacctaatccctgcagtaatggaggattttgcaaa
gacggggtggacacgttcgtttgcacctgcctccccggtttccggggcaacagatgcgag
gaagacatcaacgaatgtgagagcaacccgtgtaaaaacggtgcaaattgcacggattgt
gtgaacagttacacctgtacctgtccacctggatttagtgggatacactgtgagaataac
acgccagactgtacggagagctcttgttttaatggaggcacatgcgtggatggcattaac
agcttcacctgtctgtgcccgacgggcttcaccggcaactactgccagcatgacatcaac
gagtgcgactccagaccctgtatgaacggaggcacctgtcaggacagctatggcacgtac
aagtgcacctgccctcagggataccacgggcacaactgccaggagctggtgaactggtgt
aaaccatctccctgtaagaatggaggtttctgtcgacaaagtggtaccaaatacagctgc
cagtgtcagacgggctggaccggtctctactgcgacgtccccagcgtctcttgtgaagtg
gctgccaaacagcaaggagtggatgtggctggactgtgccgtaactccggccagtgtttg
gatgccggaaacacgcactattgtcactgccaggctggatacacaggcagctattgtgag
gagcaggtgaacgaatgcattcccaatccttgccagaacggtgccacctgcacagattac
cttggcgactattcctgcgaatgcgtgccaggttatcatggagtgaactgttccatggag
atcaatgaatgcctctctcagccctgccagaacggaggcacatgcatcgacttgatcaat
acctacaaatgctcctgtccgcggggaacacaaggtgttcactgtgagatcaacattgac
gactgcacgcccttcaccgaccccatcacccaagagcccaagtgttttaaccacggccgc
tgcgtggaccgagtgggcggataccactgcatctgcctgccaggatacgtcggggaacgc
tgtgagggcgacgtcaacgagtgtttgtccaacccttgtgacccccggggcacacatagc
tgcacacagctcacgaataacttccgctgcgagtgtcgcactggctacacaggtcagcgc
tgtgagaaagtatttgatgggtgtaagggaaagccttgtaggaacggaggtacatgtgct
gtggccagtaatactcctcatggcttcatctgtaaatgtccaccgggtttcacaggctca
acatgtgagtacgaagcccacacctgtggcagcctccactgcaaaaatggcggtacctgt
gtctccggtcagaagagccctaaatgcttgtgtgtccccgccttcaatggtcccgagtgc
caggatcccgcagaaggacactgtaaggacaacccctgctacaacggaggcacctgcgag
tatatctcagaagctccttactaccactgcatctgccccagcggcttcaatggcctcttc
tgccacatcctggactacagcttccgaggcggcacagggcgagacatcacgcccgctcct
gaggtgacggtcagctgcgaggtaccagagtgctttaagaagaaggccaacaagatttgc
gacagcacctgtaataactacgcctgcgattgggacggaggggactgctcgctgaacttt
gtcgacccgtggcagaactgctcagccgcgctgcagtgctggctttatttcaacaacggg
aagtgtgatgaacagtgtcacaacgctggatgtttgtatgacgggtttgactgccagaga
ctggagggccagtgcaatccactgtacgaccaatactgcaaagatcactacgcagacggc
cactgcgaccagggctgcaacaatgccgagtgcgagtgggacgggcttgactgcgacggg
aacgtccccgaaaagttagccgccggagtcctagttctcgtcgtccacattatgcccgac
cagctccggaacaactccttcgggtttctgcgggagctcagtcgggttctccacacaaac
gtggttttccggagcgacggcaagggagaactcatgatctacccgtattacggtaatgag
caggagctgaagaagcacaacatcaaacgctctctggacagctgggccgacgcttctggt
aatgtcctgaactctgtgaagaacggcatctacaatattgtggtggaaggaggaagacaa
cgcagagagctggacagcatgcagatcaaaggctctgtggtatacctggagatagacaac
cgtcaatgctaccagcagacctccgagtgcttccagaacaccaacgacgtggcagccttc
ctcggagctttggcttccagcggcaatctgaatgtgccttactacatcgaggcggtcaca
agcaggatcgaggagcctcccttagagctgtacccggtgtacgtggttcttgcgggactg
gcgctgttggcctttgtcgcagtgggaatggtcgcctctcgaaaacgtcgccgtgaacat
ggccaactttggtttccagagggtttcaagaccagcgagccgagcaaaaagaagaggaga
gagccggtcggcgaagactctgtcggtctgaggccactgaagaactccgacatttcttta
atggatgacaacctgaatgaatggggcgaggaggaaacgatggacaccaaacacttcaag
actgaggtgcaggcgatgctggatttagatgatcagacggaccaccggcaatggacgcag
cagcatctggacgcagctgacctgcgcattccctccattgcccctacaccccctcagggc
gagatagagaacgactgcatggacgtcaatgtccggggaccagatggcttcacccctctc
atgatcgcatcctgcagcgggggaggacttgaaacaggaaacagcgaggaagaagaagac
accaccaacgtcatcaatgacttcatctaccaaggcgccaaccttcacaaccagacggac
cgtacgggcgagaccgccctgcacctggctgcccgctacgcccgctctgatgctgccaaa
agacttctggaggccagcgcagacgccaacattcaagacaacatgggaagaactcctcta
cacgctgcagtggctgcagatgcgcagggagttttccagattttgattcgtaaccgtgcc
acagacctagacgcccgcatgcaagatggcaccactcctctgatactggcagcgagactg
gcggtcgagggcatggtggaggaactcattaactgccacgctgatgtaaatgctgtcgat
gatttcggtaagtctgctcttcattgggcagctgctgtaaataatgtggaggctgctgtg
gtgttgctaaagaacggtgcaaataaagacatgcagaacaataaggaggagacccctctg
tttttggcagcgagggagggaagctacgagaccgccaaagttctcctcgagcattttgcc
aatcgagagatcaccgaccacatggaccgtctcccacgagacatcgctcaagaacgaatg
caccacgacatcgtgcggctcatcgacgagtacaacctggtccgcagcccccccatgcac
agcgcttccatttgcaccaccctttctccaccgctctgctctcccaacgccttcatggga
ggcatgaaaccctccacccagagcaaaaaagccagaaagcccagcgcaaaaggcatcggg
tgcaaggacagcaaggatatgaaagtcaagaagaagaagaatccgcaagacgggaaggga
aacttgttagacagctcagccgtgctctcaccggtggactccctggagtcgccccacggg
tacatttcagacgtcgcctcgccgcccctgatgacatcaccattccaacaatcaccttct
atgacacttaatcagttgcagggaatctcagacagccacatgggtgtcaatcacctgggt
atgaccaataagcaagacctgacgcacatgcagtttgacccgatactccctcgcctcacc
catctgccggtgggcggctctaacggatcatcgggaatgaacggccagtgcgaatggctc
ggtcggatacacagcggtatgggtcagccgaatcaattcggagccttgaggaacacctca
ggtcaccaatccaaccagcacggtctcatgacgtctctccacaacggccaccccgctgcc
accctatctcagatgatgaattaccaaggcatgcagaacacgcacctgaccgtgcagccg
catttactgcagcagatgcagcaaaacatacaacagagacagcagcagccgggcatccag
ctccagagctccaaccccagcggtgtgagccaaaatttcatcggcggtgatctgggtgga
ccggagctccagcagggcaccgggaacagcatgcccatccatacgataatcccccaggag
acccaactgttaaacccgtcctctctgggtcccagcatggccggcacgcagttcctaaca
ccaccctcccagcacagttactctgccactatggatggcaacacgcccaaccaccaactc
caagtgcctgagcaccctttcctcacaccctcgccgggttcacccgaccagtggtccagc
tcctcgccccattccaatatgtcggactggtccgaaggcatttccagccctcccaccagc
atgcagtcgcaaataggacacataccagagcagttcaaataa
DBGET
integrated database retrieval system
