Triplophysa dalaica: 130422583
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Entry
130422583 CDS
T09616
Symbol
mmp2
Name
(RefSeq) 72 kDa type IV collagenase
KO
K01398
matrix metalloproteinase-2 (gelatinase A) [EC:
3.4.24.24
]
Organism
tdw
Triplophysa dalaica
Pathway
tdw04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
130422583 (mmp2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tdw01002
]
130422583 (mmp2)
Enzymes [BR:
tdw01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.24 gelatinase A
130422583 (mmp2)
Peptidases and inhibitors [BR:
tdw01002
]
Metallo peptidases
Family M10
130422583 (mmp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M10
fn2
Hemopexin
PG_binding_1
Reprolysin_3
Reprolysin_5
Reprolysin_4
DUF4953
Motif
Other DBs
NCBI-GeneID:
130422583
NCBI-ProteinID:
XP_056605488
EnsemblRapid:
ENSTDLG00000016066
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All DBs
Position
1:18008600..18023741
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AA seq
657 aa
AA seq
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MVCCKFLSCRHVVLKVFLVQFFVSLQTFAAPSPIIRFPGDDTSRTDQEVALHYLNKFYGC
PEDRCNLMVLKDTLKKMQKFFALPETGEIDQETVDIMKKPRCGVPDVANYNFFHRKPKWG
QKNVTYRILGHTPDLDEETIDDAFYRAFKVWSDVTPLNFHRITVGEADIMINFGRNEHGD
GYPFDGKDGLLAHAFAPGPGIGGDSHFDDDEMWTLGEGQVVKVKYGNAEGEFCKFPFLFM
GKEYTSCTSQGRDDGFLWCSTTYNFDDEGKYGFCPHELLFTLGGNGDGAPCKFPFTFQGE
KYDSCTTSGRDDGYRWCATTENYDQDTSYGFCPETAMSTVGGNSEGAPCVFPFKFLGNNY
DSCTTSGRSDGKMWCAVTKSFDDDRKWGFCPDQGYSLFLVAAHEFGHALGLEHSEDPGAL
MAPMYTFTKTLRLSDDDIKGIQELYGVPTDKPLPTRLPPVTPMDICNENTIFDAIAQIRG
EIFFFKDRFLFRTPAFRKKPTGPMLVATFWSELPEKIDAAYENPLEEKTVFFAGDEMWVY
SASTLERDYPKKISTMGLPSDLQGIDAAYSFHKSKKTYLFAGNKFWRYNEGKKKMDPGFP
KLIADSWSSIPDDLDAALSLIGEGYSYFFKDSHYLKMDDSSLKIVKVGEIKRDWLHC
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggtgtgctgtaagtttctcagctgcaggcatgttgttcttaaagttttcctcgtgcaa
ttttttgtttccctgcaaacttttgctgcgccctcacccatcataaggttcccaggcgat
gatacttctcgcacagaccaagaagtggcattgcactatttgaacaagttctatggctgc
ccagaagacaggtgtaatctgatggtgttgaaagacacgctaaagaagatgcaaaagttt
tttgctctaccagaaactggggagattgaccaggagacagtagatatcatgaagaagcca
cgatgtggagttcctgatgtggccaattacaatttctttcacaggaaacccaagtggggg
cagaagaacgtcacatacaggatcttaggtcacactccagatctggatgaagaaacaatt
gatgatgcgttctatcgtgcatttaaagtctggagtgatgtcacacccctaaacttccac
aggatcacagtaggagaagctgacatcatgattaactttggccgaaatgaacatggtgat
ggttacccatttgatgggaaagatggtctgctggctcatgcctttgctcctggacccggt
attggaggagactctcactttgatgatgatgagatgtggacattaggagagggacaagtg
gtaaaggtcaagtatggtaatgccgaaggggaattctgtaagtttccgttcttgtttatg
ggtaaggagtacaccagttgcacctctcagggtcgagatgatggattcctgtggtgctct
accacatacaactttgacgatgaaggaaaatatggcttctgtcctcatgagttgcttttc
acattgggtggaaatggagacggagccccttgtaagttccccttcacattccagggagag
aaatatgatagttgtactacctcaggcagggatgatgggtaccgctggtgtgccaccaca
gaaaactatgaccaggatacgtcctatggattctgtccagagacagctatgtcgactgtt
ggaggtaattctgagggtgctccttgtgtcttcccctttaaattcctgggcaacaattat
gattcctgcacaacctctggccgcagtgatggaaagatgtggtgcgccgtcaccaaaagc
tttgatgatgatcgcaagtggggcttctgtcctgaccaaggctatagtttattcctggtg
gcggcccatgagtttggtcatgctctgggtttggaacactctgaggaccctggtgctctc
atggctcctatgtacacttttaccaaaaccctaaggctgtctgatgatgatatcaagggc
atccaggagctctacggtgtaccaacagacaaaccattgcccactcgcttgccaccagtc
actccaatggacatatgtaatgagaacaccatatttgatgctatagcccagatcagagga
gagattttctttttcaaagacagattcctcttcaggacgcctgctttcagaaagaagccc
acaggtcctatgctggtggcgacattctggagtgaacttccagagaagattgatgcagct
tatgagaatccgctggaggagaaaactgtcttctttgcaggtgatgagatgtgggtatat
tcggccagtactctggagcgagattatcccaagaagatttccaccatgggtcttccctca
gatttacagggtattgatgctgcttactccttccacaagagcaaaaagacatacctgttt
gctgggaacaagttttggagatacaatgaaggcaaaaagaagatggatccaggcttccct
aaacttattgctgattcttggagttctatccctgatgacctggatgctgccctcagtctt
attggtgaaggttatagctacttcttcaaagattcccattatctgaaaatggatgacagc
agtctgaaaatcgttaaggttggagagatcaaaagggactggctacactgctga
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