Triplophysa dalaica: 130425686
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Entry
130425686 CDS
T09616
Symbol
cacna1ha
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H isoform X1
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
tdw
Triplophysa dalaica
Pathway
tdw04010
MAPK signaling pathway
tdw04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
130425686 (cacna1ha)
04020 Calcium signaling pathway
130425686 (cacna1ha)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tdw04040
]
130425686 (cacna1ha)
Ion channels [BR:
tdw04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
130425686 (cacna1ha)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
130425686
NCBI-ProteinID:
XP_056608005
EnsemblRapid:
ENSTDLG00000017040
LinkDB
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Position
7:16409724..16483490
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AA seq
2320 aa
AA seq
DB search
MTDGEGREHFHYLERDEVRVPISALYRAPAHREEIGDEEEKSSTWIPVHESSQGQGSGAR
DPTPDLVSDEEEQPPYPALAPVVFFCIKQTTRPRSWCLRMVCNPWFEHVSMLVILLNCVT
LGMFQPCEDLKCESEWCIILQAFDDCIFAFFAVEMVIKMIALGIFGSKCYLGDTWNRLDF
FIVMAGMMEYSLDGHNASLSAIRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLL
CFFVFFIFGIVGVQLWAGLLRNRCFMSPDVKDFYNLSMMSSYFMHEDGEDNPFICSASKD
NGMLLCTDVPPLKEGDIECTLNEPTPGHAYFGLDGPSRNTCVNWNHFYNMCKPGELNPHK
GAVNFDNIGYAWIAIFQVITLEGWVDIMYYLMDAHSFYNFIYFILLIIVGSFFMINLCLV
VIATQFSETKQRENQLMQEQRARYLSNDSTLASYSEPGSCYEEMLRYISHLYRKVKRRAS
RLYLGWQSKRRKKVNPNSGLSGGDGAGGGANGHSRHRGGGHWIRSVHNLVQKHQRQHCHH
SNGSPSPLTPTGPGEALEMRCITTGPQLTVSTQPNLSSRTQSVQSIYQGDFHEAPQVRPG
TVAGAPPLGRINGGMNYPTILPSFICGYKSNKPAGKGRGDSNSSSECDAIDPFEKLQQLV
GEHSHSRVLLQMAGVVPSPLLFELLSCPYCAKALETMDLELGDSDCSRSEGDVVYEFSHG
VEFKPGRSTHHKVQEESNRLAQYWENFRDRLIRIVDSKYFNRGIMIAILINTLSMGIEYH
EQPEELTNILEISNIVFTSMFVLEMLFKLLAFGIFGYIKNPYNIFDGIIVVISVWEIIGQ
ADGGLSVLRTFRLLRVLKLVRFLPALRRQLVVLMKTMDNVATFCMLLMLFIFTFSILGMH
LFGCKFSMKMENGDTIQDRKNFDSLLWAIVTVFQILTQEDWNVVLYNGMASTTPWAALYF
VALMTFGNYVLFNLLVAILVEGFQAEGDANKSDTDEEKRSVNFEEEEKMGELRTTELKMY
SLMMSANGHVDLRGTLPPPIIMRTAATPMPTPKSSLGPESVFGSAESRRGSAVSIDPNAF
DQKSLTSPRRSPCHPRGSGSNWGSRRSSWNSLGRAPSLKRKDTSGERESLLSGEGRGSFE
DEDLEGDKMGNIIGGSIQHPTSLDIPELPQDPSFSSLGEYHDCNGRTLHLPTDLSTSLGK
EDSITEEEDLDDSFCFRLKRTFQAYKPQWCKDHEDWSLYLFSPQNKFRMMCQRLISHKLF
DHVVLVFIFLNCITIALERPKIQPYERVYLTISNYVFTVIFVAEMTVKVVALGFCAGKHS
YLQSTWNVLDGVLVFVSLMDILVSVASTGGNRIFGILRVLRLLRTLRPLRVISRAPGLKL
VVETLITSLRPIGNIVLICCAFFIVFGILGVQLFKGKFYHCEGLDTKNIHNKSECLQANY
KWIRRKYNFDNLGQALMSLFVLSCKDGWVNIMYDGLDAVGVDKQPERNHNPWMLLYFISF
LLIVSFFVLNMFVGVVVENFHKCRQDQEEEEARLREEKRQRLLEKKRRSKEKCGSEAQQR
PYYADYSPARLYIHTLCTNHYLDLFITGIIGINVVTMSIEHYKQPSYLEEGLKYCNYVFT
IIFIIEALLKLMAFGFRRFFKDRWNQLDLAIVLLSVMGIALEELKMNAALPINPTIIRIM
RVLRIARVLKLLKMATGMRALLDTVMQALPQVGNLGLLFMLLFFIYAALGVELFGKLECE
ENNPCEGLSRHATFVNFGMAFLTLFRVSTGDNWNGIMKDTLRECTPEDKQCLSYLPLVSP
IYFVTFVLIAQFVLVNVVVAVLMKHLEESNKEAKEDAEMDAEIEMEMEMARRLSIASEGS
SLGPEGRAIYVGPRPDSPGEIEGIQRTQENLLCPRKMSVSRMHSLPNDSYMFRPVRPASA
PYPLEEVEPSLGYLELGSITSVHSQPCEGYSLLQVPGVPPHSQLYNCLPKIPPPQPSPTH
SIGRTLRRQEELENDSIDGEGSDFKDNLDRPGKSKGSFKLPVPRISGPSSSQGSPSLPPR
GSAPSVHTFRQPHRQHNIPSRPPSQANSSRSTSPSGSMFELADPIDDEVCHINSTARLWA
GVQTEARSHSLSPYHTSGTLLPVLVKNSSSAANLAELSIKDPKKCFSVDTEGFLEKPYGA
DDHRRHSIEICPSVDNGVFGQELVEKRHGPMRGQSLHIPRKKKMSPPCISIESPIEMGAP
ASLASMKKLTESSMLLRRRTPSYDLALQRESLDLPENQLSTQPLIKVERHPSHCAEYLSL
LHPNPMSSLAGILCESTQPPPFDSRFEESTDFGTVNRTAH
NT seq
6963 nt
NT seq
+upstream
nt +downstream
nt
atgactgatggcgaggggagagaacactttcattacttggagagagacgaggtaagagtt
cccatctcagccctgtaccgggcgcctgctcaccgtgaagagatcggcgatgaggaggaa
aaaagcagcacatggatccccgtacatgagagctctcagggacagggatccggggcacgg
gaccccactccggatttggtctctgatgaggaggaacagcccccctatccggcgctcgcg
cccgtggtgttcttctgcatcaaacagaccactcgtccacggagctggtgtctaaggatg
gtttgcaacccatggtttgagcatgtgagcatgctggtcattctgttgaactgtgtgact
ctgggcatgtttcagccctgtgaggacctcaagtgcgagtctgagtggtgtatcatcctg
caggcatttgatgactgcatcttcgccttcttcgcggtggagatggtcatcaaaatgata
gccctggggattttcggatcaaagtgttaccttggcgacacatggaaccgcctggacttc
ttcattgtcatggcagggatgatggagtactcactggacggtcataacgccagcctgtca
gccattcggactgtgcgagtgctcaggcccctgcgagccatcaacagagtgcccagtatg
aggatactggttactctgcttctagatactctgcctatgttaggcaacgtcctcctgctg
tgcttttttgtcttctttatattcgggattgtcggggtgcagctctgggctggacttctg
aggaatcgctgtttcatgtcacctgacgtgaaagacttctacaatctgtccatgatgagt
tcgtacttcatgcatgaggacggcgaggacaaccccttcatctgttcagccagcaaggat
aacggcatgctgctctgcacagacgtgcctcccctcaaggagggtgatattgagtgcacc
ttaaacgagcctacaccgggacacgcttactttggcctggatggacccagcaggaacacc
tgcgttaactggaaccacttttacaatatgtgtaagcctggggagctcaaccctcacaaa
ggggcggtgaactttgataatattggatatgcctggattgcgatattccaggttattact
ttggaaggatgggtggatatcatgtattaccttatggatgcccactccttttacaatttt
atatattttatattgcttattatagtgggctccttcttcatgatcaacctgtgcctggtt
gtaatagcaacccagttctctgaaacaaagcagcgtgagaaccagctgatgcaggagcaa
agagcacgctacctctccaacgacagtacgcttgccagctactccgagccgggaagctgc
tacgaggagatgctcaggtacatcagccatctgtaccgcaaggtgaagcgtcgggcgtcc
cgcctttaccttggctggcagagcaagcgcaggaagaaagtgaaccccaacagcgggctg
agtgggggagacggggctggaggcggggccaacggccacagcaggcacaggggcggcggt
cactggatccgttcggtccacaaccttgtacagaagcaccaacgtcagcactgtcatcac
agcaatggcagcccgagccctctgacccccacaggccctggcgaggccctggagatgagg
tgcatcacgacggggccgcagctgactgtgtccactcagccgaatctttcttccaggact
caatcagtgcaaagtatttatcaaggggactttcatgaagccccgcaggtgcgtccaggc
accgtggcgggcgcgccaccgctcgggcgaataaacggggggatgaactatccaaccatc
ttgccctcctttatctgcggctacaaaagcaacaagcctgcaggtaaaggcagaggggac
tcgaactccagctcagaatgtgatgccatagatccctttgagaagctgcagcagctggtg
ggagagcacagtcacagccgtgtgctgttacagatggctggtgtggtacccagccctctg
ctctttgagctcttgagctgtccatattgcgcaaaggctctggagaccatggacctggag
ctcggtgattcagactgctccaggtcagaaggggacgtggtgtacgagttctcccatgga
gtggaattcaaacccggtcgctcgacccatcataaagtgcaggaggagagcaaccgactg
gcgcagtattgggaaaacttccgggacagattgatacgcatagtggacagcaagtacttt
aatcgaggaattatgattgccatcctcatcaacaccttaagcatggggattgaataccac
gagcagcctgaagagctgacaaacatcctggagatcagcaatattgtcttcacaagcatg
ttcgtcctcgaaatgctcttcaaactgcttgcctttggcatcttcggctacatcaagaac
ccttacaacatctttgatggcattattgtggtcataagtgtgtgggagatcataggacag
gcggatggaggcctctcggttctgaggacgttccgcctcttgcgtgtgctcaaactggtt
cgcttcctccctgcactgcgcagacagctggtggtcctcatgaagactatggacaatgtg
gctacattctgcatgctgctgatgcttttcatcttcacattcagcattcttgggatgcat
ctgtttggatgcaaattcagcatgaagatggagaatggagacacgattcaagacaggaaa
aactttgattctctgctgtgggcgattgtcactgtgttccagattctgacccaggaggac
tggaatgtggtattgtataatggaatggcttccacaactccatgggcggctctttacttt
gtggcactgatgacttttgggaattacgtgctttttaacctgctggtggccatattagtg
gagggctttcaggcagagggggatgctaacaagtcggacaccgatgaggaaaagaggtcg
gtgaactttgaagaggaggagaagatgggggaattacgaaccacagaactaaagatgtac
tctctgatgatgtcagcgaatgggcatgtggatcttcggggcactttgcctccaccaatc
atcatgcgcactgctgccacacccatgcccactcccaagagctctcttggccctgaatcg
gtgtttggttcggccgagtcgagacggggcagtgcggtctccatagatccaaatgccttc
gatcagaaatccctgactagcccgagaagatctccatgtcacccccgtggatcaggcagt
aactggggcagtcgcaggtccagctggaacagcttaggacgggcgccaagcttaaaaaga
aaagacacatctggggaaagggagtctctgctgtctggggaaggtaggggcagctttgag
gatgaggatttggagggggacaagatgggcaatatcattgggggctcaattcagcatccc
acctctctagacatccctgagctgccacaggaccccagcttcagctcattgggagagtat
catgactgcaatggaagaaccctacacctgcccactgacctgtccaccagcctgggcaaa
gaagattccatcacggaggaggaggatttggatgatagcttttgtttccgtctgaagagg
acgtttcaagcatataaacctcagtggtgtaaagatcatgaggactggtcactttatctg
ttctctcctcagaacaagtttcgaatgatgtgtcaaaggttaatttctcacaagttgttt
gatcatgtggtcctggtattcatcttcttaaattgtatcacgattgctctggaaagacct
aagatccagccatatgagagggtgtatctcactatttccaattatgttttcactgtgatc
tttgttgctgaaatgactgtgaaggtggtggcccttggcttctgcgccgggaagcacagc
tatcttcagagcacctggaacgttctggatggagtgctggtgtttgtctccctcatggac
attctggtttcagtggcttccaccggtggaaacaggattttcgggatcctgagggttctt
cgcctgctgagaaccctgcggcctctgagggtgattagccgagctccaggacttaagctt
gtagtggaaacactcataacgtccctgaggcccatcgggaacatagtgctgatctgctgt
gccttctttattgtctttggcattctgggtgtccagctcttcaaaggaaagttttatcat
tgtgaaggtctcgacactaaaaacattcacaataagtctgagtgtcttcaagcaaactac
aaatggattcggagaaagtacaacttcgacaatttgggacaggccctcatgtcgctgttt
gtgctgtcctgtaaggacggatgggtgaatataatgtacgacggactggatgctgtgggc
gtggacaagcagcccgagcgcaatcataatccctggatgctcctctacttcatctccttc
ctgctgatcgtcagcttctttgtgctgaacatgtttgttggggtggtggtggagaacttc
cacaagtgcagacaggaccaagaggaagaagaggcgcgtctccgcgaggagaagaggcag
aggctgctggagaaaaagcgcaggagtaaggagaaatgcgggtctgaggctcagcagagg
ccctattatgcagactactctccagccaggctttacatccacacactgtgtaccaaccac
tatctggacctcttcatcacaggcatcatcggtatcaatgtggtcaccatgtctatcgag
cattacaaacaaccttcttacctggaggaggggttgaaatactgtaactatgtctttacc
atcatcttcattattgaggctttgctcaaactgatggcctttggctttcggagattcttc
aaagacagatggaaccagctggatctagcaatagtcctgctctctgtcatgggcatcgcg
ctggaggagctcaagatgaatgcagcactgcccatcaaccctaccatcatccgcattatg
agagtgctgaggatagccagagtactgaagcttctaaagatggctactggcatgagagct
ctgttggatacagtgatgcaggctttaccacaggtgggaaatctgggcttgctgtttatg
ctgctcttcttcatttatgcagcacttggcgtggagctttttgggaaactagaatgcgag
gaaaacaacccatgtgaaggactaagtcgacatgcgacctttgtaaactttggaatggcc
tttttaactttattcagagtgtcaacgggggacaactggaatggaataatgaaggacact
ctgcgggagtgcactccagaagataagcaatgcctcagctacttgcccctggtgtccccc
atctactttgtcacttttgtgctaattgctcagtttgtgctggttaatgttgtggtggct
gttctgatgaaacatctggaggagagcaacaaagaagctaaagaagatgcagaaatggat
gccgagatcgagatggagatggaaatggctcggcgtctcagtatcgcctcagaagggagc
tctttagggcctgagggaagagcaatttatgtaggaccacgcccagattcacctggggag
attgaggggattcagaggactcaggagaatttactctgtccacggaaaatgtcggtgtca
aggatgcattctctgcccaatgatagctatatgtttcgcccggtgaggccagccagtgca
ccgtatccactggaggaagtggaacccagtcttgggtaccttgagttaggctccatcacg
tcggttcactcccagccatgtgaaggttattccctgctccaggtccctggtgttccgccc
cattcccagttgtacaactgccttcctaaaattcctcctccccagccctctccaacccat
agcattggcaggactctacgaagacaggaggaattagaaaatgactccatcgatggggaa
ggttcggatttcaaagacaatctcgacagaccagggaaaagcaaaggcagcttcaagctg
cccgttccccggatctcagggcccagcagctcccagggatcaccctcactacccccacgt
ggaagcgcacccagtgtccacaccttccggcagccccacaggcagcacaatatcccttct
cgacctccaagccaggccaacagcagcagaagcacaagccctagcggctccatgtttgaa
ttagctgatccgatagatgatgaggtctgccacatcaacagtacagcaaggctgtgggca
ggggtccagacagaagcacgcagtcactctttgtctccctaccacacctcagggacactg
cttccagtcctggtgaagaacagcagcagtgctgccaacttagccgagttaagcatcaaa
gatcccaagaagtgcttcagtgtggacaccgagggttttctggaaaaaccttacggtgcc
gacgatcatcgccggcactctattgagatttgtccttcagtagacaatggtgtgttcggt
caagaactggtcgaaaagaggcacggtccaatgcgcggacagtctctgcacattcccagg
aagaaaaagatgagccctccttgtatctccatagagtccccaattgaaatgggggccccc
gcctctctcgcatccatgaaaaagctgacggagagcagcatgttactgcggcggaggacg
ccttcgtacgacctggccctgcagcgggaatctctggatttgccggagaaccagctgtcc
acccagccgctcatcaaagtagagcgccacccctctcactgtgcagagtatctgtcacta
ctgcaccccaaccccatgagcagtctggcgggcattctttgtgaaagcacacaaccacct
ccctttgacagcagatttgaagaatccacagacttcggcactgtaaacagaactgcccat
taa
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