Triplophysa dalaica: 130430724
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Entry
130430724 CDS
T09616
Symbol
vcam1b
Name
(RefSeq) vascular cell adhesion protein 1b
KO
K06527
vascular cell adhesion molecule 1
Organism
tdw
Triplophysa dalaica
Pathway
tdw04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
130430724 (vcam1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
tdw04090
]
130430724 (vcam1b)
04091 Lectins [BR:
tdw04091
]
130430724 (vcam1b)
CD molecules [BR:
tdw04090
]
Proteins
130430724 (vcam1b)
Lectins [BR:
tdw04091
]
I-type lectins (Siglecs)
130430724 (vcam1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
V-set
ICAM1_3_5_D2
C2-set_2
C1-set
ICAM_N
Izumo-Ig
Motif
Other DBs
NCBI-GeneID:
130430724
NCBI-ProteinID:
XP_056615846
EnsemblRapid:
ENSTDLG00000011678
LinkDB
All DBs
Position
10:8727209..8733384
Genome browser
AA seq
813 aa
AA seq
DB search
MDFTLLVFLLLPVVAASHKVDLPPQVVFKMGDRRELACSMRSCPGELTFVWASLEDKPLF
VDVENKPTESVLIFENVTKNHENTVLCKATCGKETKQAKTTIKVYSFPRNPVISGNDGLI
LGEENVLTCEVSHVYPSEYLEVQLLQGDTVLQTKEGELGGDGLMITHKFRPSSEDDGNGV
TCRASLNMNHIESDGMTRETTGLLRVLSAPHNVRVSGFAAVSLGSGFTLTCEAEGSPELA
FTWTALKPDGQRVEMGKLRELFVRNVSLTDAGIYRCEVSNRLGSQTADVSVVVKAPPMET
IIEARPQTVPKEGDSISIYCKSDGVQVKLIILRLMVDGRETELKTSVGAETTFTIDSVKL
SDSGLYVCEAFNEYGRQRATLDLTVEKHFLEVALQPDGVIVAERGSGHALSCQASGCPQP
TFSWRRLENLPTWGLTKTRGFLSQLFFDPVELEDEGTYICEVTCGSVAESKQTEIKLFSF
PSSPVVESSGPSLEGETVRLTCSVRDVFPADLFQIMWMDGEKELFSEARTFSSRLQNLTS
GLSYALKAKDNDRLITCKVLLDMVGVLPAHAVKTSSTVLSLHYPPRGTRIKVSPQGDLKE
GESVSISCLSDSVPLGRVVLRRVVDAIETELKANDGAETSVILPSIELGDSGLYVCEAFN
QYGSHQESVQVIVKTPPRNTTVEVLPSSEVQEGQNVTICCNSVSFPPPAVVLRRLDSDTV
IHSPDGVFQLINLTPNDTGLYQVNVTNDLGYETEIFLINVKEKRFESTPSWNDFVTPTVC
LGSALALLGIIVYLWRESKTGSYDLTKCNADTV
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atggattttactttgcttgtgtttttacttctgccagttgttgctgcttcacataaggtg
gacctgcccccccaagttgtgttcaaaatgggagacaggagggagctggcgtgcagcatg
cgctcgtgcccgggcgagttgacgtttgtttgggcttcgttagaggacaagccgctattt
gtcgatgttgaaaacaagcccacggagtccgtgctgatcttcgaaaatgtcacgaagaat
cacgaaaacaccgtgctgtgcaaagcgacctgtgggaaggagacgaaacaggcgaaaact
acgattaaagtttattcttttccaagaaacccagtcatatccgggaatgatggcttgata
ctgggcgaagagaacgtcctgacctgtgaagtatctcacgtatacccttcagagtacctt
gaagtacaattgttacaaggagacacggttcttcagactaaagaaggagaactcggtgga
gatggtctgatgataactcataaattcagaccttcaagtgaggatgatgggaatggcgta
acctgccgagcatcgcttaatatgaaccatatagaatctgatgggatgacaagggaaaca
actggactcttgagggttctttctgcacctcataatgtgagagtgtctggatttgctgcc
gtctctctgggatctggttttactttgacctgtgaggccgagggcagccctgagcttgcg
tttacatggacggccctcaaaccagatggccagcgggttgaaatgggaaaacttagagag
ctctttgtgcgcaacgtgtccctgactgatgcgggtatttaccggtgtgaagttagcaat
cgattgggaagccaaacggctgacgtttctgttgtcgttaaagcacccccaatggagaca
atcattgaagcaagaccgcaaacagttccgaaggaaggagactccataagcatctactgc
aagtccgacggggtccaggtgaagctcattattttgagactcatggtggacggccgagaa
acagagctgaagaccagcgttggggctgaaacaacatttacaattgattctgtcaagctg
tctgactctggattgtatgtgtgcgaggctttcaatgagtacggacgtcagagagccact
ctcgatctaaccgttgaaaagcatttccttgaagtggcgctacaaccagacggtgtgatt
gtggcagagcgtggctccggtcatgcgctttcctgtcaggcttcaggttgccctcagccc
acgttctcctggaggcgtcttgagaatctgccgacctggggcctaacaaagaccaggggc
ttcctgtcccagctgttcttcgacccagtggagttggaagatgagggaacttatatttgt
gaggtcacatgtggctcagttgcggagtctaaacagaccgaaattaagttgttctcattc
ccttcaagtcccgtcgtagaaagttctggaccttctctggagggggagacggtacgcttg
acctgcagcgttcgggatgtttttccagccgaccttttccaaattatgtggatggatggg
gagaaagaactcttctctgaagctagaacgttttcaagtcgactgcagaatctgacatca
gggttgtcttatgccttaaaagccaaagacaacgacagattgatcacctgcaaagtcttg
ttggacatggttggtgtgctgccagcgcatgccgtaaagacatcttcgactgtattgtcc
cttcactatcctcccagaggaaccaggataaaggtgagcccacagggcgatttgaaggaa
ggagaatctgtgagcatttcctgtctgtccgacagcgtcccgttgggtcgtgtggttctg
aggagggtggtggacgctatagaaacagagctgaaggccaatgacggggctgaaacatca
gttatacttccttccatcgagctgggtgactctggcctgtatgtgtgcgaagcttttaac
cagtatggaagccaccaagaaagtgttcaagttattgtgaaaacaccacccagaaatacg
acggtggaggtcttaccatcctctgaggttcaggagggccaaaatgtcaccatctgttgt
aactccgtgagctttcctccacctgctgtggtcctcaggaggctggatagcgatactgtg
atccactctcccgatggcgtctttcagttgatcaacctcactccaaacgacacaggcctg
taccaggtcaacgtcaccaatgacttgggctacgagacggagattttccttatcaacgtg
aaggaaaaacgctttgagtccacacctagctggaatgattttgtaacccccacagtttgc
ctgggatctgcattggcgttacttggcataatcgtttatctctggagggaaagtaagacg
gggtcgtacgatctcaccaaatgcaatgcggacactgtatag
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