Triplophysa dalaica: 130432948
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Entry
130432948 CDS
T09616
Symbol
cdkal1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tdw03016
]
130432948 (cdkal1)
Enzymes [BR:
tdw01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
130432948 (cdkal1)
Transfer RNA biogenesis [BR:
tdw03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
130432948 (cdkal1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TraT
TRAM
Motif
Other DBs
NCBI-GeneID:
130432948
NCBI-ProteinID:
XP_056618548
EnsemblRapid:
ENSTDLG00000010732
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Position
12:13897331..14220304
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AA seq
561 aa
AA seq
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MMPSACDSLVDDIEDMVTSHEPTPHERQFARMSIVPRARKHKQQSAGEELQADSVIPGTQ
KVWVRTWGCSHNNSDGEYMAGQLAASGYKITEDSSDADLWLLNSCTVKNPAEDHFRNSIK
KAQEQDKKVVLAGCVPQAQPRMDYLKGLSIIGVQQIDRVVEVVDETVKGHSVRLLGQKKE
KGKRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGELASYPIEELVERARQ
SFQEGVCEIWLTSEDTGAYGRDIGTDLPSLLWELVKEIPEGAMLRLGMTNPPYILEHLEE
MAKILNHPRVYAFLHVPVQSASDSILMDMRREYCCADFKRVVDFLKEKVPGITIATDIIC
GFPGETDEDFERTMELVRDYRFPSLFINQFYPRPGTPAARIQQVPAQVKKQRTKELSALF
QSYNPYDHKVGERQHVLVTEESFDTLYYVAHNKFYEQVLVPKKSEFKGKMIEVDIYEAGK
HYMKGHPVEDAQVFTPSIAKPLQKGQVSGLPQELKVSHQNGVHVSKDSSMLTGLLWRLEG
HGLKLLSFGMAMAAIIFFFCE
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgatgccgtctgcttgtgattctcttgttgatgatattgaggatatggtgacttctcat
gagcccactcctcatgagcggcagtttgcccggatgagcattgtgccccgtgcacggaag
cacaagcaacaatctgcaggtgaagaacttcaggcagacagtgtaattccaggcacacag
aaggtctgggtgaggacgtggggttgctctcacaacaactctgatggagaatacatggct
ggacagttggctgccagtggctataaaataacagaggattcatctgatgctgatctgtgg
ttgctgaacagctgcacagtgaaaaaccctgcagaagatcactttaggaactccatcaag
aaagcacaggagcaggataagaaggtggttttagcaggatgtgtgccacaggctcagccc
aggatggactacctcaaaggcctgagtatcatcggggtccaacagattgatagagtcgtg
gaggtggtggatgagactgtcaaaggtcactccgtgcgtctgctgggtcagaagaaggag
aaggggaagcgtttgggaggagcgcgcctggatttgccaaagattaggaagaacccgctg
attgaaatcatttccatcaatactggctgtttaaatgcttgcacatactgcaaaaccaag
cacgccagaggcgaattggctagttacccaatagaagagcttgttgagagagccaggcag
tccttccaggagggtgtttgtgagatctggttgaccagtgaagacaccggagcatacggc
agagatattggcaccgacctgccgtcgctgctctgggaactggtgaaggaaattccagag
ggcgcaatgctccgcctgggcatgaccaacccaccatatatcctggaacatctagaggaa
atggcaaaaatcctgaaccacccacgggtctacgccttcctccatgtgcccgtccaatca
gcatctgacagcattctgatggacatgaggagagagtactgctgtgctgacttcaagcgt
gtcgtagacttcttaaaggagaaggttccaggtatcaccattgccactgacatcatctgc
gggtttccaggagaaacggatgaggactttgaacggacgatggaactggtgagggattac
aggttccccagcctcttcataaaccagttttacccaagacctggaactccggctgccagg
attcagcaggttccagcacaagtgaaaaagcaaagaaccaaagagctgtccgcgcttttc
cagtcatacaacccatacgaccacaaggtcggagaaaggcagcatgtgctggtcactgaa
gagtcttttgataccctgtattatgttgcccacaacaagttctatgagcaggtgctggtg
cccaagaagtctgagttcaaagggaagatgatcgaggtggacatatatgaggctgggaag
cactacatgaagggccatcctgtggaggacgcccaggtcttcactccttctattgctaag
cctcttcagaagggtcaggtgtctggactcccgcaggagctgaaggtgtcccatcagaat
ggtgttcacgtctcaaaggattcctctatgcttactggattgttgtggagattggagggt
catggactcaaactgctttcatttggaatggctatggctgccataatattttttttttgt
gaatga
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