Thioclava electrotropha: AKL02_016675
Help
Entry
AKL02_016675 CDS
T06997
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
tec
Thioclava electrotropha
Brite
KEGG Orthology (KO) [BR:
tec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tec03009
]
AKL02_016675 (rimO)
Enzymes [BR:
tec01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
AKL02_016675 (rimO)
Ribosome biogenesis [BR:
tec03009
]
Prokaryotic type
ribosomal protein modification factors
AKL02_016675 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
DUF5005
Motif
Other DBs
NCBI-ProteinID:
QPZ92366
LinkDB
All DBs
Position
3524404..3525789
Genome browser
AA seq
461 aa
AA seq
DB search
MSTNPPNLRPDLAPRARITDAPRPGQPLIGMVSLGCPKALVDSERILTRLRAEGYAISPD
YAGADAVIVNTCGFLDSAKAESLEAIGEALNENGRVIVTGCLGAEPEYITGTHPSVLAVT
GPHQYEQVLDAVHAAVPPDPDPFVDLLPAAGVKLTPRHYSYLKISEGCNHKCKFCIIPDM
RGRLVSRPAHAIVREAENLVGAGVRELLVISQDTSAYGVDIKHAEERGHRAHITDLARDL
GSLGAWVRLHYVYPYPHVRNLIPLMAEAQENGGGVLPYLDIPFQHAHPDVLKRMARPAAS
AKTLDEIAAWRAACPDITLRSTFIVGYPGETEDEFRYLLDWMDEAQLDRVGCFQYENVEG
ARSNTLPDHVPDEVKQDRWNRFMEKAQAISEAKLQAKVGSVQQVIVDAVDAEGATCRTKA
DAPEIDGNLFIDEDFENLSPGDIVTVEVDEASEYDLWGRLV
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgagcacaaaccctccgaacctgcgtcccgatctcgcgccccgcgcgcgcatcacggat
gccccccgccccggtcagccgctgatcgggatggtctcgcttggctgccccaaggcactg
gtcgacagcgaacgcatcctgacgcggctgcgcgccgagggttacgcgatctcgcccgat
tacgcaggcgcggatgcggtgatcgtgaatacctgcgggtttctcgacagcgccaaggcg
gaaagcctcgaggccatcggcgaggcgctgaatgaaaacggccgggtcatcgtgaccggc
tgtctgggcgcggagcccgaatatatcaccggcacgcacccttccgtgctggccgtgacc
ggcccgcatcaatacgagcaggtgctggacgcggtccatgccgccgtgccgcccgatccc
gatcccttcgtcgatcttctgcccgccgccggcgtgaagctgacgccgcgccattacagc
tatctgaagatttccgagggctgtaaccacaagtgcaagttctgcatcatccccgacatg
cgcggccgcctcgtcagccgcccggcccatgcgatcgtgcgcgaggccgaaaatctcgtc
ggcgcgggcgtgcgtgaactgctggtgatcagccaagacacgtccgcttacggcgtcgat
atcaaacatgccgaagagcggggccaccgcgcgcacatcaccgatctcgcccgtgatctg
ggctcgctcggcgcttgggtgcggctgcattacgtctacccctacccgcatgtgcgcaac
ctgatcccgctgatggcggaagctcaggagaatggcggcggcgtgctgccctatctcgac
attccgttccagcacgcgcacccggatgtgctcaagcggatggcgcggcccgcggcctcg
gccaagacgctcgacgagatcgcggcatggcgcgcggcctgcccggatatcacgctgcgc
tcgaccttcatcgtgggctatcccggcgagaccgaggacgagttccgatatctgctcgac
tggatggacgaagcgcagctcgatcgcgtcggctgcttccaatatgaaaacgtcgagggc
gcgcgctccaacaccctgcccgatcacgtgcccgacgaggtgaagcaggatcgttggaac
cgcttcatggaaaaagcgcaggcgatttccgaagcgaagctgcaagccaaagtcggcagc
gtccagcaggtgatcgtcgacgcggtcgatgccgaaggcgccacctgccgcaccaaggca
gacgcgcccgagatcgacggcaacctgttcatcgatgaggatttcgagaatctcagcccc
ggtgatatcgtgacggtcgaggtcgatgaggcctcggaatacgatctctggggaaggctc
gtttga
DBGET
integrated database retrieval system
