Tauraco erythrolophus (red-crested turaco): 104379085
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Entry
104379085 CDS
T08611
Symbol
MSH6
Name
(RefSeq) DNA mismatch repair protein Msh6 isoform X1
KO
K08737
DNA mismatch repair protein MSH6
Organism
teo
Tauraco erythrolophus (red-crested turaco)
Pathway
teo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
teo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
104379085 (MSH6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
teo03400
]
104379085 (MSH6)
DNA repair and recombination proteins [BR:
teo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
104379085 (MSH6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
PWWP
Autoind_bind
Motif
Other DBs
NCBI-GeneID:
104379085
NCBI-ProteinID:
XP_009984583
LinkDB
All DBs
Position
Unknown
AA seq
1263 aa
AA seq
DB search
MEGYPWWPCLIYNHPTERTIVRGKGKSTRIHVQFFDDSPTRGWVSIKYLRPYKGSSDGET
LKGGMFYSTKPEIKRAMVLADDAMSKDKTKRLELAVCSEPSDTEEEEEEEMEQMSESASG
NSDNCNSEEDVKSNKRVMSRESAIKAKRRRVLDSDSDHDGSDVEFKPDVKEAASSEEASS
GVDENESTDTETDAESVAESPIKVPSKRKRRERSKPAKRSSVENERSETPKRAVTVSSEV
KSKLTSFAAPESFESQANACSGGIGGFTVWEHEKLDWLQEGKKKDAHRRRQRDPDYDPCT
LYVPEDYLNKCTPGMRRWWQLKSQNFDAVIFYKVGKFYELYHMDAVTGVNELGLIFMKGT
WAHSGFPETAFGRFSDVLVQKGYKVARVEQTETPEMMETRCKSMSHPTKFDRVVRREICR
IITKGTQTYSIMDCDPSENHNKYLLSVKEKEDSSGQRVYGVCFVDTSVGKFYVGQFSDDR
HCSRFRTLVAHYTPVQVLYEKGNLSVDTQKILKGSLVSCIQEGLISGSQFWNASKTLKVL
LEEGYFKEKENSENGCCLPSVVKSLTSESDSLGLTPGENSELALSALGGCVFYLKKCLID
QELLSLANFEEYVPVDIDTAKTTSSSRFFGKTDQRMVLDGVTLMNLEVLQNGTNGSTEGT
LLERIDSCCTPFGKRLLKQWVCAPLCNPKSINDRLDAVEDLLAVPDKMSEVSEHLKKLPD
LERLLSKIHSIGSPLKSQNHPDSRAVFYEEIKYSKKKIADFLSALEGFKVMNEIVDVMEE
VASDFKSKVLKQLVTRKAKNPDGRFPDLSAELKRWDTAFDHNQARKTGVITPKAGFDPDY
DKALQDIKAVEEDLHKYLDKQRKLLGFKSVLYWGAGKNRYQMEIPESVVSRNLPEEYELK
STRKGYKRYWTKEIEKMLAAMVNAEERRDAALKDCMRRLFYNFDKNSKDWQTAVECIAVL
DVLMSLANYSQDGDGPLCRPVILLPVDSAPPFLELKNSRHPCITKTFFGDDFIPNDIMIG
SKDDNSSSEASCVLVTGPNMGGKSTLMRQAGLLVIMAQLGCYVPAEVCRLTPIDRVFTRL
GASDRIMSGESTFFVELSETSSILQHATEHSLVLVDELGRGTATFDGTAIASAVVKELAE
KIQCRTLFSTHYHSLVEDYSHNMAVRLGHMACMVENESEDPSQETITFLYKFIEGACPKS
YGFNAARLANIPEEVIQKGHRKAQEFEKITVSLRIFRYLCQVVDGATRDANAVQKLTTMI
SHL
NT seq
3792 nt
NT seq
+upstream
nt +downstream
nt
atggaaggttatccttggtggccgtgtctcatatacaaccatccaactgaaagaacaata
gtcagaggaaaagggaaatccactcgtatccatgtacagttttttgatgacagccctaca
aggggctgggtcagtattaaatatctgaggccatataaaggttcatcagatggggagaca
ctgaaaggaggtatgttttatagcacaaagcccgaaattaaaagagccatggtgctagca
gacgatgcaatgagtaaagataaaaccaagcggcttgaactggcagtatgcagtgaacca
tcagacactgaggaggaagaagaggaagaaatggagcagatgagtgaaagcgcatcaggc
aacagtgacaactgcaatagtgaggaggatgtgaagagtaataagcgagtaatgagcagg
gaaagtgccataaaagccaaaagaagaagagtgttggattctgacagtgatcatgatggc
tctgacgtagagttcaagcctgatgtgaaagaagcggcaagcagtgaggaagctagtagt
ggggtggatgaaaatgaatctactgacacagagacagatgcagagagtgttgcagaaagt
cccataaaagtcccttctaaacgaaagagaagagagagaagcaagcctgctaaaaggagt
agcgtagaaaatgaacgttctgaaacgcccaaaagagcagtaacggtttcttcagaagtc
aagtctaagctgacatcgtttgcagcacctgaaagttttgaatctcaagcaaatgcttgc
agcggaggcatcggtggcttcaccgtatgggaacatgaaaagcttgattggctgcaagaa
gggaagaagaaggatgcgcacaggagacggcagagggaccctgattatgacccatgcact
ctgtatgtacctgaggactatctcaacaagtgtacgccaggaatgcggaggtggtggcag
ctgaaaagtcagaactttgatgctgtgattttctacaaagttggaaaattctatgagttg
tatcatatggatgcagtcactggcgtaaatgagttgggcctgatctttatgaagggtact
tgggcccattcaggttttccagaaactgcgtttggcagattctccgatgttctggtgcag
aaaggctacaaggtagcccgtgttgagcaaacagaaactcccgaaatgatggaaacacgc
tgcaagtcaatgtcccacccaacaaaatttgacagggttgtacggcgagaaatatgcaga
atcatcaccaagggcactcagacttacagcattatggattgtgatccctctgagaaccat
aacaagtaccttctgagcgttaaggagaaagaagactcctctggacaacgtgtttatggg
gtctgctttgttgacacgtcggtggggaagttctatgtaggccagttctcagacgaccgg
cactgttcgaggtttaggactttggtagcacattacactcctgtgcaggtgctgtacgag
aaggggaacctgtctgtggacacacagaagatactgaagggctcacttgtttcttgcatt
caggaagggctgatctctggttcccagttctggaatgcatctaaaacactaaaagtcctt
cttgaagaaggatatttcaaggagaaagagaactctgaaaatggatgttgtctgccctct
gtagtcaaatctctgacatcagagagtgactcgctgggattaactcctggtgaaaacagt
gaattagctttgtcagctctcgggggatgtgtcttctatctcaaaaaatgtctgattgat
caggagctgttgtcgctggcaaactttgaggagtacgtccctgtggatattgatactgca
aaaactacgagttcaagtcgtttctttggcaaaactgaccagcggatggtgctggatgga
gtcaccctgatgaacttggaagtcctgcagaacggaaccaatggaagcacagaaggtact
ttgttggaaaggattgattcttgctgtacgccatttgggaagcgactcctgaaacagtgg
gtctgcgctccgctctgtaatcctaaatccatcaacgatcgtttggatgctgttgaggac
cttctggcagtgccagataaaatgtctgaagttagtgagcacctgaagaaacttcctgac
cttgaaaggctgctcagcaaaattcatagtattggatcaccacttaaaagtcagaaccat
cctgacagcagggccgtcttttatgaagaaatcaaatacagcaaaaaaaaaattgctgac
tttttgtctgcgctggaggggtttaaagtaatgaatgaaattgtcgatgtcatggaagaa
gttgccagtgacttcaagtctaaagtccttaagcagctcgtcacccgcaaagccaaaaat
ccagatggccgcttcccagacttgagtgcagagcttaaaaggtgggacactgcttttgat
cataaccaggctcgaaagacaggagtgattactccaaaggcaggctttgaccccgattat
gataaagcactccaggacattaaagctgttgaggaagatcttcacaagtacctggataag
caacgcaaactgcttggattcaaatccgtgctgtactggggagcaggcaaaaaccgatac
caaatggaaataccggagagtgtagtatcgcgtaatttgcctgaggagtacgagttgaag
tcaaccaggaaggggtataagcgctactggaccaaggagatcgagaagatgctggctgca
atggttaatgccgaagagcgcagagatgcagcactaaaagactgtatgaggcgtttgttt
tacaactttgataaaaatagcaaggactggcagacggctgtggaatgcattgctgtgttg
gatgtcttgatgtcccttgctaactacagtcaagacggtgatggaccactgtgccgacct
gtgattctactgcctgtggatagtgctcctcccttcctggaactgaaaaattcacgccat
ccgtgcattacaaaaactttttttggggatgattttattcctaatgacatcatgataggc
agcaaagatgacaatagcagtagtgaagcttcctgtgtgttagtaactggcccaaatatg
ggtggcaaatctacactcatgagacaggctggtctcctggttataatggctcaactggga
tgctacgtacctgctgaagtctgcaggctcaccccgattgacagagtgtttacgaggctc
ggcgcctcagacagaattatgtcaggggaaagtaccttctttgtcgaattgagtgagact
tccagcattctccaacacgcaacagagcattcccttgttcttgtggatgaattgggcaga
ggcacagcgacttttgacggaacagctatagcgagtgcagttgtgaaagaactcgcagag
aaaatccagtgtcggactctgttctccacacactaccactcgctggtcgaggactactcg
cacaacatggctgtgcgccttgggcacatggcatgtatggttgaaaatgagagtgaagat
ccaagccaggaaacaattacattcctgtacaagttcattgaaggagcatgtccaaagagc
tatggcttcaatgcagccagacttgctaatattccagaggaagttattcagaagggacac
agaaaagcacaagagtttgaaaaaataactgtttcactgagaatatttaggtatctgtgc
caggtggtggatggtgccacgcgtgatgccaacgctgttcagaaactcaccactatgatc
agtcacctttaa
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integrated database retrieval system
