KEGG   Tachysurus fulvidraco (yellow catfish): 113633933
Entry
113633933         CDS       T08119                                 
Symbol
polr2i
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB9
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
tfd  Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03020  RNA polymerase
tfd03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tfd00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    113633933 (polr2i)
  09124 Replication and repair
   03420 Nucleotide excision repair
    113633933 (polr2i)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tfd03021]
    113633933 (polr2i)
   03400 DNA repair and recombination proteins [BR:tfd03400]
    113633933 (polr2i)
Transcription machinery [BR:tfd03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     113633933 (polr2i)
DNA repair and recombination proteins [BR:tfd03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      113633933 (polr2i)
SSDB
Motif
Pfam: RNA_POL_M_15KD TFIIS_C Ogr_Delta Zn_ribbon_recom TF_Zn_Ribbon DZR Zn_Tnp_IS1595 Lar_restr_allev zf-C4_Topoisom GpA_ATPase
Other DBs
NCBI-GeneID: 113633933
NCBI-ProteinID: XP_026988390
LinkDB
Position
13:10819126..10823058
AA seq 126 aa
MDLESGACEPGFVGIRFCQECNNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKIT
HEVDELTQIIADVSQDPTLPRTEDHPCPKCGHKEAVFFQSHSMKAEDAMRLYYVCTAPHC
GHRWTE
NT seq 381 nt   +upstreamnt  +downstreamnt
atggatttggaaagcggcgcgtgcgagcccgggttcgttggaatcaggttctgtcaggag
tgtaacaacatgctgtatccaaaagaggacaaagagaaccgcatcctcctctatgcttgc
aggaactgcgattatcagcaggaagccgataacagctgcatctacgtgaacaaaatcaca
cacgaagttgatgagctcacacagataattgctgatgtgtctcaggatccaacactgcct
cgtaccgaagatcatccatgccctaaatgtggccacaaggaggcagtgttcttccagtca
cacagcatgaaggctgaggatgcaatgaggctgtactacgtgtgtacggctccacactgt
ggacacagatggacagagtga

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