Tachysurus fulvidraco (yellow catfish): 113634548
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Entry
113634548 CDS
T08119
Symbol
notch1a
Name
(RefSeq) neurogenic locus notch homolog protein 1
KO
K02599
Notch 1
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
113634548 (notch1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_CA
EGF_2
Ank_2
Ank
Notch
NODP
NOD
Ank_4
Ank_3
Ank_5
EGF_3
JAG1-like_EGF2
cEGF
DL-JAG_EGF-like
Gram_pos_anchor
Motif
Other DBs
NCBI-GeneID:
113634548
NCBI-ProteinID:
XP_026989386
LinkDB
All DBs
Position
21:15246216..15267542
Genome browser
AA seq
2416 aa
AA seq
DB search
MNRFFLISLFLGTASLCEGKGLRCLEPCQNGGTCELTANGKPGCSCPADYAGAQCQFPNP
CSPSPCRNSGVCRPRTQGNDVEFTCDCALGFSGPLCLTPVNHACMSSPCRNGGSCSLLTL
STYSCRCPPGWTGKTCQQADPCASNPCANGGRCSAFDSHFICTCPPSFHGPTCRLDVNEC
AMTPSPCQNSGVCINEVGSYRCRCPLEYAGTHCERPFQPCQPSPCVNGGTCTQTSDTGYA
CTCLPGFTGQDCEHNIDDCVQHACENGGRCMDGVNTYNCHCDKHWTGQYCTEDVDECELS
PNACQNGGTCHNTVGGFHCVCVNGWTGDDCSENIDDCASAACYHGATCHDRVASFYCECP
HGRTGLLCHLDDACISNPCQKGSNCDTNPVNGMAICTCPPGYTGSACNQDIDECSLGANP
CEHGGRCLNTKGSFQCKCLQGYEGPRCEMDVNECKSNPCQNDATCLDQIGGFHCICMPGY
EGMFCQINADDCASQPCLNNGKCIDKINSFHCECPKGFSGSLCQVDIDECASTPCQNGAK
CTDGANKYTCECKEGFTGAMCEIDINECASNPCHYGVCKDSVASFTCACRPGYAGRLCEI
NINECLSQPCHNGGTCLDRENSYTCSCPKGTTGRNCEINVDDCKSNPCDFGKCIDKINGY
ECLCDPGYTGATCKINIDDCATNPCRNGGTCVDGVNSFTCTCPEGFHDSMCLSQRDECAS
NPCIHGNCQHQANAYVCVCEPGWTGRNCDLNVNECLSNPCVNGGTCRDMTNGYICSCKAG
FTGPNCQTNINECASNPCLNQGTCIDDVAGYKCNCLLPYTGELCESVLAPCSTRPCKNRG
VCRESEDYQSFSCACPNGWQGQTCEVDINECVKSPCRNGGVCVNSMGGFQCRCNPGFTGD
LCETDIDDCTPNPCSNGGVCVDRINGFTCVCVAGFRGERCTEDIDECVSAPCRNGGNCTD
CVNSYTCSCPAGFSGINCEINTPDCTESSCFNGGTCVDGINSFSCVCLPGFTGSYCQHDV
NECDSGPCLNGGTCQDGYGTYKCTCPHGYTSTNCQSLVRWCDSSPCKNGGSCWQQGSSFT
CQCASGWTGIYCDVPSVSCEVAAQQQGVSVAALCRNGGQCVDAGSTHLCRCQAGYMGSYC
QDQVDECVPNPCHNGATCTDYLGGYTCECLAGFHGVNCSKEINECASQPCQNGGTCIDLV
NSYKCSCPRGTQGVHCEIDVDDCSPDVDPETGEPRCFNGGRCVDRIGGYGCVCSPGYVGE
RCEGDVNECLSDPCDPNGSYNCVQLVNSYRCECRTGYTGQRCDTVFDGCKDKPCKNGGTC
AVASNTKHGYICKCPPGFSGSSCEYDSSSCGPLRCRHGATCLPGPRCLCPPGYSGRECQA
RLDSPCVSNPCYNGGTCQASPEAPFFHCLCPSHFNGLFCHILDYSFNGGLGLDITPPPAE
SEEAEPRCEVPQCEQRGGDGVCDAACNSHACGWDGGDCSLNFDDPWHECSSALQCWRYFN
DGKCDMQCHSAGCLYDGFDCHQLEGQCNPLYDQYCKDHYSDGHCDQGCNSAECGWDGLDC
AEDVPQRLASGILVLVVHLPPHELLNNSSSFLRQLSALLRTNVALKRHATTGEPLVYPYY
GTEHELSKHTRTAHEWNTNPGHLLQRTARSLSALLRPRHRRELDNMEIKGSIVYLEIDNR
QCYQQSEECFQSATDVAAFLGALASSGNLNVPYIIEAVTSENEAPGRGEMYPMFLALLVL
AVLVLAAVGVVLSRKRKREHGQLWFPEGFKVTETKKKRREPVGEDSVGLKPLKNSDSTLM
DEQLSEWAEEDHCKRFRFDDHTTPDIGIQPDPRQWTQQHLDAADLRLTSIAPTPPRADTD
TDCVDVNVLGPDGLTPLMIASCSGETGEEEEGEEGVIANFLWHGADPHQRTERAGETALH
LAARYARSDAAKRLLESGADANAQDHAGRTPLHAAVASDAQGVFQILIRNRATDLDARMN
DGTTPLILATRLAVEGMVEELINCHADSNAIDDAGKSALHWAAAVNNVEAAVVLLKNGAN
KDLQNNKEETPLFLAAREGSYETAKLLLDHLANRDITDHLDQLPRDIANERMHHDIVRLL
EEYNLVQTPPNLTHSPPICSPEAFLGIRSSPGGTNIANNAKKPRKPGGKEGGKEMKTKKK
KNGDVNILSPIESDVSSPPMMTSPFQQSPPITHHLQGLADSQMGGAHLGMAKPFDSGPPR
LSHLGVANNGGPTGHCDWLARAQQQQQGAFSTIMPTMHHGANLPQVMGYPTMQSSHLGTP
AHLLSSHMHPNHLQHQNSNSVPNHALTHHFLGDISGAELQSNSIQTVLPQETQRLPQPMS
TTQFLTPPSQHSYSTPMDNTPNHQPQVPDHPFLTPSPGSPDQWSSCSPHSNLSDWSEGIS
SPPTSIHMNHIPEAFK
NT seq
7251 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgtttctttttgatctccttatttctggggacggcttcgctctgtgaggggaaa
ggtctcagatgtttggagccatgtcagaacggtggaacgtgtgagctcacagccaacgga
aaaccaggctgcagctgtccagcggactatgcaggtgcacagtgtcagttcccaaacccg
tgcagtccatcaccctgccggaacagcggtgtgtgtcgcccgcgcacgcagggcaatgac
gtggagtttacgtgcgactgtgcactgggtttcagtgggccactgtgcctgacacctgtc
aatcatgcatgcatgagctcaccgtgccgcaatggaggatcctgttcacttcttacactc
agcacctacagctgccgctgccctcctggctggacaggtaaaacatgccaacaggcggat
ccatgtgcgtcaaacccctgtgcaaacggtggccggtgctcagcatttgactcccacttt
atctgcacgtgtccgccaagctttcacggacccacgtgccgcctggatgtaaacgagtgt
gccatgactccttcaccctgtcaaaacagtggagtgtgtataaacgaggtgggctcatac
cgctgccgctgcccacttgagtatgctggcacgcactgtgagcgccctttccagccctgc
cagccttctccctgtgttaacgggggcacatgcacacagaccagtgacactggctatgca
tgcacctgcctgccaggcttcaccgggcaagattgtgagcataacattgatgactgtgtt
cagcatgcgtgtgagaatggaggccggtgtatggatggtgtaaacacatacaactgccac
tgtgacaaacactggacaggtcagtactgcacagaagatgtggatgagtgcgagttatcc
ccaaatgcctgccaaaacggtggcacatgtcacaacacagtgggcggattccactgcgtg
tgtgtgaacggctggacaggggacgactgcagcgagaacatcgatgactgcgccagtgca
gcctgctaccatggagccacatgccatgaccgtgtagcatcattctactgcgagtgccca
cacggacgcaccggtctgctgtgtcatctggatgatgcatgcatcagtaacccatgtcag
aaaggctccaactgtgacaccaaccctgtcaatggcatggctatctgcacctgccctcct
ggctacactggctctgcctgcaaccaggacattgatgagtgctcccttggggccaatcca
tgtgagcacggcgggcgttgtctgaacaccaagggctcgttccagtgcaagtgcctccaa
ggctatgaggggccacgctgtgaaatggatgtgaacgagtgcaagtctaacccatgccag
aacgatgccacctgccttgatcagattggtggttttcactgcatttgtatgccagggtat
gagggcatgttttgccaaatcaacgcagatgactgcgcctcccagccttgtctcaacaac
ggcaaatgtatcgataagatcaactctttccattgcgagtgtcctaaaggcttctctggg
agcctttgccaagtggatatagacgagtgtgcaagcacgccgtgccagaacggagccaag
tgcaccgatggggcaaacaaatacacctgcgagtgcaaagaaggtttcacaggcgcaatg
tgtgagatagatataaacgagtgcgcctcgaacccatgccactacggagtgtgtaaggac
agcgtggcatcgttcacatgtgcgtgtcgccctggatatgctgggcgcttgtgtgagatc
aacatcaacgagtgtttgagtcaaccgtgccataatggggggacctgccttgaccgggag
aactcgtacacctgtagctgccctaaaggaaccacaggtcgaaactgtgagatcaatgta
gatgactgcaaaagtaacccatgcgattttggcaaatgcatcgacaagatcaacggatat
gagtgcctgtgtgaccctggatacacaggagcgacttgtaaaattaacatcgacgattgc
gcgacaaacccgtgtcgtaacggtggcacctgtgtggacggtgtgaactcgttcacttgt
acctgccctgaaggcttccacgactccatgtgcctctcacagcgggacgagtgcgccagc
aacccctgcattcacggcaactgccagcaccaggccaatgcatacgtttgtgtgtgtgag
cctggctggactggacgtaactgtgacctgaatgtgaacgagtgtttgtctaacccgtgt
gtaaatggcggaacatgcagagatatgaccaatggctacatctgcagctgcaaagcagga
ttcacaggtcctaattgccagactaacatcaatgagtgtgcatccaatccttgcctgaac
cagggcacctgtattgacgatgtagctggatataagtgcaactgcttgctgccttataca
ggtgagctgtgtgagagtgtgttggctccctgctccacacgcccatgtaagaacagaggc
gtgtgtcgcgagtctgaagactaccagagtttctcctgtgcttgcccaaatggctggcaa
ggtcagacgtgtgaagtggacatcaacgagtgtgtgaagtcgccatgtcgtaatggcgga
gtgtgcgtaaactcaatgggtggcttccaatgcagatgtaatccaggatttacaggagac
ctctgtgagactgacattgatgactgcactcctaacccctgcagcaatggtggcgtgtgt
gttgaccgcatcaacggcttcacatgtgtgtgtgtggcgggattccgcggtgagcgctgc
accgaggatatcgacgagtgtgtgagcgccccctgccgcaatggtgggaactgcacggac
tgtgtgaatagctatacctgcagctgtccagctggattcagtggcatcaactgtgagatc
aacacacctgactgcactgagagctcctgcttcaatggtggtacatgtgtggatgggatt
aactcattctcatgcgtctgtctgcccggcttcacgggcagctactgccaacatgatgtc
aacgagtgtgactcaggcccatgccttaatggtggcacatgtcaagacggctacggcacc
tacaagtgcacctgcccacatggatacaccagcaccaactgccagagcctggtgcgctgg
tgtgattcatctccctgtaaaaatggaggctcgtgctggcagcaaggttcatctttcacg
tgccagtgtgccagtggttggactggtatctactgcgatgtgcccagtgttagctgcgag
gttgccgctcagcagcaaggtgtatctgtggcggctctgtgccgtaacggaggccagtgt
gtagatgcaggcagcacacacctgtgccggtgccaggcaggctacatgggcagctactgc
caggaccaggtggacgagtgtgtgccaaacccatgtcacaacggtgcaacctgtaccgat
tacctgggtggatatacatgtgagtgtcttgcgggatttcacggagtaaactgcagcaag
gagataaacgagtgtgcgtctcagccttgtcagaacggcggaacctgcatcgacctcgtc
aattcatacaagtgttcctgccctcggggaacacaaggtgttcactgtgaaatcgatgtg
gacgattgttccccggatgttgatcctgagaccggcgagccacgctgttttaatggcgga
cgctgtgtggaccggataggtggctatggttgtgtttgctcaccaggctatgtgggcgag
cgctgtgagggtgatgtgaacgagtgcttgtctgacccctgcgacccgaacggatcctac
aactgtgttcagctggttaatagctaccgctgtgaatgccgcacaggatatacaggccag
cgctgtgacactgtgtttgacggatgtaaggataaaccctgcaaaaatggtggaacctgc
gcagttgcaagcaacacaaaacatggatacatctgcaaatgcccaccgggtttctctggg
tcatcgtgtgagtatgactcaagctcatgtggccccctgcgctgccgccacggtgccact
tgtctcccaggtccacgctgcctttgcccaccaggttacagtggacgcgagtgccaggca
cgccttgattctccatgtgtttccaacccgtgctacaatggtggcacatgccaggcatct
ccagaggctccattcttccactgtttgtgcccgtcacacttcaacggcctcttctgccac
atcctagactattcattcaacggaggcctgggtctggacatcacacctcccccagctgag
tcagaagaggcagagccacgttgtgaggtgccacagtgtgagcagcgaggtggtgatggt
gtttgtgatgcagcatgcaacagtcacgcatgtggctgggatggcggtgactgttccctc
aattttgatgacccctggcatgagtgcagttctgctctgcagtgttggaggtacttcaac
gatggcaagtgtgacatgcagtgtcacagtgctggctgtctctacgatggttttgactgc
caccagctcgagggccagtgcaatcccttgtatgatcagtattgtaaggaccactactca
gacggccactgtgatcagggctgcaacagtgctgagtgtggctgggatgggctggactgt
gctgaggacgttccacaacgtctggcatctgggatccttgtacttgttgtgcatttgcca
ccccatgaactcctcaacaactcttcctcgtttctgcgccagcttagtgccctcttacgc
actaacgtcgccctcaagcgccatgccaccacaggcgagcctctagtttacccctactat
ggcactgaacatgaactgagcaaacacacacgtaccgcccacgagtggaacactaaccct
ggccaccttctgcagcgcactgctagaagcctgtcagcgctgctcaggccgcgccatcgc
cgggagctggacaatatggagattaaaggctccattgtatatctagagattgataaccgg
caatgttaccagcagtcagaggaatgttttcagagcgcaacagatgtggctgcattcctg
ggagcgctggcctccagcggcaatctcaatgttccctacattatagaggctgtcaccagt
gagaatgaggctcctggtcgtggagagatgtaccccatgtttctggcactactggtcctg
gcagtgttggtcctggctgctgttggagtcgtgctgtcacgcaagcgaaagcgtgagcat
ggccagctctggttccctgagggctttaaagtgaccgaaaccaaaaagaaacgtagagaa
cctgtgggagaggactcagttggacttaagcctctgaagaactctgatagcacactgatg
gacgagcagctgagtgagtgggcagaggaagaccactgcaaacgcttcaggtttgatgac
cacaccacaccagacataggtatccagccagatccacgtcagtggactcagcagcatctt
gatgcagccgatttgcgcttgacctctatagctcctacaccaccacgggctgacaccgat
actgactgcgtagatgtgaatgtacttggccccgatggcctgacgcctctgatgatcgcc
tcatgcagtggtgagactggtgaggaggaggagggtgaggaaggcgttattgccaacttc
ctctggcatggtgccgatccacaccagcgtaccgagcgggcgggtgagacggcactgcac
ctggctgcccgttatgcccgatctgacgctgccaagcgccttctagagtctggcgcagat
gccaatgcacaggaccatgcaggacgcacaccactacatgccgctgtggcttctgacgca
caaggagtcttccagatcttaatcaggaatcgggctacagatctggatgcccggatgaac
gatggcacgacaccactcattctggccacacggcttgcagtagagggcatggtcgaggag
ctcatcaactgccatgctgattctaatgctatcgatgacgctgggaaatctgctctccat
tgggctgctgctgtcaacaatgttgaggctgctgtagttcttctgaaaaatggagccaac
aaggatctccagaacaacaaggaggaaacgcctctcttcttggctgcacgtgagggtagc
tacgagacagcaaagcttctcctcgaccacttggccaaccgtgacattacggatcatctg
gatcagctgccacgtgacatcgccaatgagcgtatgcaccacgatattgtgcgtctactg
gaagaatataatctggttcagacccctccgaatcttactcattcacccccaatctgctcg
cccgaagctttcctgggcatcagatctagccctggtggcaccaatatcgcaaataatgca
aagaaacctcgcaaacctggaggaaaggagggaggaaaggaaatgaagacaaaaaagaaa
aagaacggagacgtaaacatcctctctccaattgaatcagatgtctcttcacccccaatg
atgacatcacccttccaacagtccccacctatcactcatcacttgcaagggttggctgac
tcccaaatgggcggggctcatctggggatggcaaaaccatttgattcaggtcctccacgc
ttgtcccatctcggtgtagctaataatggaggcccaacagggcattgtgattggctggca
agagcacagcagcagcaacaaggagcgttctcaactataatgccaacaatgcaccatggc
gctaacttgccacaagtgatgggctatcccacaatgcaaagcagccacctgggtacacca
gctcacctgctgtctagccacatgcatccaaaccatctgcagcaccaaaactcaaactct
gtccccaatcatgcccttactcaccacttcctgggtgacataagtggggctgaacttcag
tccaactcaatccaaaccgtactgccacaggaaacacagcgcctgccccagcccatgtct
accacacagtttctaactcctccatctcagcacagttactccacccccatggacaacacg
ccaaatcaccagccacaggtccctgatcatcccttcctgacgccatcccctggatctcca
gaccaatggtctagctgctctccacattccaacttatctgactggtcagagggtatctca
agcccacccaccagcattcacatgaaccatatccctgaagcattcaagtaa
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