Tachysurus fulvidraco (yellow catfish): 113637503
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Entry
113637503 CDS
T08119
Symbol
polr2b
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03020
RNA polymerase
tfd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
113637503 (polr2b)
09124 Replication and repair
03420 Nucleotide excision repair
113637503 (polr2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tfd03021
]
113637503 (polr2b)
03400 DNA repair and recombination proteins [BR:
tfd03400
]
113637503 (polr2b)
Enzymes [BR:
tfd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
113637503 (polr2b)
Transcription machinery [BR:
tfd03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
113637503 (polr2b)
DNA repair and recombination proteins [BR:
tfd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
113637503 (polr2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
113637503
NCBI-ProteinID:
XP_026993995
LinkDB
All DBs
Position
15:complement(1464252..1473871)
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AA seq
1174 aa
AA seq
DB search
MYDQDEDIQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHTSGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTIIKEGEEQQQTQHQKTFIGKIPIMLRSTYCLLSGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTAECRSCLENSSRPTSTIWVSMM
ARGGQGVKKSAIGQRIVSTLPYIRQEVPIIIVFRALGFVSDRDILEHIIYDFDDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKERRIKYAKEVLQKEVLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEIRIYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDVKKAHQARAGVSQVLNRLTFASTLS
HLRRVNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKRRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKGVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGFDQEEIFEKPKREECQGM
RHAIYEKLDDDGLIAPGVRVSGEDVIIGKTVTLPENDDELDSTNRRYTKRDCSTFLRTSE
TGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTVGHLIECLQGKVSANKGEIGDATPFNDAVNVQKVSNLLSEYGY
HLRGNEVLYNGFTGRKLTSQIFLGPTYYQRLKHMVDDKIHSRARGPVQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGLMAIANTRTHTYECRGC
RNKTQISLVRLPYACKLLFQELMSMSIAPRMMTT
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtatgaccaagacgaagatatacagtatgacgaggatgatgatgagatcactcctgat
ctgtggcaggaagcctgctggattgtcatcagctcctactttgatgagaaaggtttggtg
cgacagcagctggattcatttgatgagtttattcagatgtccgtccagaggattgtggag
gacgcgccgcccattgacctgcaggccgaggcccagcacacctccggagaggtggaggaa
ccgcctcggtacctgctgaagtttgagcagatctacctgtccaagccgacacactgggaa
agagatggcgctccgtcccccatgatgcccaacgaagcacgtctccgaaacctcacttac
tcggcccctctgtacgtggacatcactaagaccatcataaaggagggagaggagcagcag
cagacgcagcaccagaaaaccttcatcggtaaaattcccatcatgctccggtccacctac
tgcctgctgagcggcctgacggaccgtgacctgtgcgagctgaacgagtgtcctctcgac
ccgggcggctacttcatcatcaacggctctgagaaggtgctgattgctcaggaaaaaatg
gccacaaacaccgtgtatgtgttcgccaagaaggactcgaagtacgcctacacggccgag
tgccggtcctgcctggagaactcctccagacccaccagcaccatctgggtcagcatgatg
gccagaggaggacagggagtaaagaagagcgcgatcgggcagaggatcgtctccacctta
ccgtacatcagacaggaagttcccatcatcatcgtgttccgggcgctgggcttcgtgtcc
gacagagacatcctggaacacatcatctacgacttcgatgatcccgagatgatggaaatg
gtgaaaccatctctggacgaggcgttcgtgatccaggagcagaacgtggctctgaacttc
atcgggtctcgaggggccaaacccggcgtcactaaagaaaggaggataaaatacgccaaa
gaggttctgcagaaggaggtgctgcctcacgtcggcgtgtccgacttctgcgagaccaaa
aaggcctactttttaggttacatggtgcacaggctcctgctggcggctctgggcagaaga
gagctggacgacagagatcactacggcaacaagaggctggatctggccggtccgctactg
gctttcctcttccgaggaatgttcaagaacctgctgaaggagatcaggatctacgctcag
aagttcatcgaccgagggaaagacttcaacctggagctggccatcaaaacacggatcatc
tcggacggactgaagtactcgctggccacggggaactggggcgacgtcaaaaaagcccat
caggctcgagccggagtgtctcaggtgttgaacagactgacgttcgcctcgacgctttct
cacctccgccgcgtcaattcgcccatcggccgagacggcaaactggcgaagccgaggcag
ctccataacaccctgtggggtatggtgtgtcccgccgagacgcccgagggccacgctgta
gggctggtgaagaacttggcactgatggcgtacatctctgtgggttctcagccgtccccc
attctggagttcttggaggagtggagcatggagaacctggaggagatctcacctgctgcc
attgcagacgctacgaagatctttgtgaacggctgctgggtaggaatccacaaagacccc
gagcagctgatgaacactctgaggaagctcaggaggcagatggacatcattgtgtctgag
gtgtccatgatccgtgatatccgagagcgagagatccggatttacacggacgccgggcgg
atctgtcgcccgctgctcatcgtggagaagcagaagctcctgctgaagagacgccacatc
gatcagctcaaagagcgagagtacaacaactacagctggcaggacctggtagcgagtggc
gtagtggagtatatcgatacattagaggaggagactgtgatgttagccatgacccccgat
gacctccaggagaagggcgtggcctactgctccacctacactcactgtgagatccatcca
tccatgatcctgggagtgtgtgcatccatcattccattccctgatcacaatcagtctccc
aggaacacctaccagtctgctatggggaagcaggctatgggtgtgtacatcaccaacttc
cacgtgcgtatggacactctggctcacgtgctctactacccccagaagcccctggtcacc
acacgctccatggagtacctgcgcttcagagaactgccagcaggtatcaattccatcgtg
gccatcgcgtcgtacacgggttacaatcaggaggattccgtcatcatgaaccgctccgcc
gtggaccggggcttcttcaggtcggtgttctaccgctcctataaagagcaggagtcaaag
aaaggcttcgaccaggaggagatttttgagaaaccgaagcgtgaagagtgtcaaggaatg
cggcacgccatttacgagaagctggacgacgacggcctgatagcgccgggcgtgcgcgtg
tccggcgaggacgtgatcatcgggaagacggtcaccctgcccgaaaacgacgacgagctc
gacagcacaaaccggcgctacacgaagcgagactgcagcacgttcctgcgcaccagcgaa
accggcatcgtcgaccaggtcatggtcacgctcaaccaggagggctacaagttctgcaag
atccgggtacgttcggttcgaatccctcagatcggagacaagttcgccagtcgacacgga
cagaagggaacctgcgggattcagtacaggcaggaggacatgcccttcacctgcgaagga
atcaccccagacatcatcatcaacccccacgccatcccctccagaatgacagtcggtcac
ttgatcgaatgtctgcaggggaaggtttctgcgaataaaggggagatcggcgacgccaca
ccgttcaacgatgccgtgaacgtacagaaggtgtccaacctcctgtctgaatacggctac
cacctgagaggaaacgaggtgctgtataacgggttcacgggtcgaaagctgacctctcag
atcttcctcggccccacttactaccagcgcctcaaacacatggtggacgataagatccac
tcgagggcacgaggtcccgtccagatcctcaacaggcagcctatggagggtagatcacga
gacggaggtctgcggttcggcgagatggagcgagattgtcagatcgctcacggcgcagct
cagttcctgagggagcggctgttcgaggcgtccgatccttaccaggtgcacgtgtgtaac
ctgtgtggcctcatggccatcgccaacacgcgcacacacacctacgagtgcaggggctgc
cgcaacaagactcagatctcgctggtgcggctgccgtacgcctgcaagcttctgttccag
gagctcatgtccatgagcatcgccccgcgcatgatgaccacctaa
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integrated database retrieval system
