Tachysurus fulvidraco (yellow catfish): 113638011
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Entry
113638011 CDS
T08119
Symbol
grin3ba
Name
(RefSeq) glutamate receptor ionotropic, NMDA 3B isoform X1
KO
K05214
glutamate receptor ionotropic, NMDA 3B
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04020
Calcium signaling pathway
tfd04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
113638011 (grin3ba)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
113638011 (grin3ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tfd04040
]
113638011 (grin3ba)
Ion channels [BR:
tfd04040
]
Ligand-gated channels
Glutamate (ionotropic)
113638011 (grin3ba)
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
113638011
NCBI-ProteinID:
XP_026994767
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Position
11:25038066..25102557
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AA seq
1163 aa
AA seq
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MSVMVCRLVAYLSVSLHALISPCQLHPQPCGILAHIEHTVRLGAVLPSRQPSRVRAAVNR
ALLHARNRPHALLPYNLSLEVVWARAAHADPESVFRCVCQDVVVRGVSAVLAFPQSHQEL
VQVDFISAFLQIPFISIIEEGEALHTQNRFHLQMLTHVPASGLAELLLSVLVRAGWQGGA
AVMCPGGGDSGLLEHLQQLGGAGINGSHWHLWETLDLSSHMALDEANNNNNNKFVLNKKP
DYTSQEIADKEQEVKDLLSQLMNRTPSALHSSVVVFGSDPECVSLVLRAAAQLRHTLWVL
GLPLNLDALSAVGSPKDLLAYGQTERRPLSSYIGDALQLVGRAVSDASMVRPDLTLIQNM
VNCFDKPNKHEVLSSGHYLSRFLSNTSFEGLTGHVQVHPSVSRVSTTQGFHIWTLQRDAL
GQPSWTTVAEWHSGHLEMEKKSIWSDLMKHEMDQVLTIQTGGRWHPGLPVSGHKIRVVTL
VEHPFVFTRKADEDGQCQAGQLCLDPQTKNLDVLNNLFRALEQKNSSVLPSEMVKCCYGF
CIDLLEKLAEDMQFDFELYIVGDGKYGAWKNGQWTGLVGDLLSGAADTAVTSFSINSARS
KVMDFTSSFFSTSLAILVRSKDTAAPIGAFMWPLHWSMWVGIFITLHITALFLTLYEWKS
PFGLTPHGRNRVRVFSYSSALNLCYAVLFGRTIATKTPKCWTGRFLMNLWAIFCLLVLSS
YTANLAAVMVGEKIFEEVSGIHDAKLQHPSLGFRFGTVHESSAEDYMKKSFPEVHEYMRH
FNQPTTPQGVATLKTDPPQLDAFIMDKALLDYQVSIDAECKLLTVGKPFAIEGYGIGLPR
HSPLTRNFSELVNSYKSDGFMDLLHDKWYRVTHCGKRSLAVTETLQMGIQHFSGLFVMLC
VGVVGSLLTLLSEHTFYSFILPHLHSQHRLKYWLHTSQKIHRALNTVCEDKRTDTVNTNI
PLCLSEGCKLHSLPSADPSISSSTSTNRWNSGSPEATSSEAKDVNHKRVHFELESERGVK
DLDGAVEGSQGVMERSDGALCNLLGWDQGSRRLDGGIKKLLRSQRGVRGLVGSPPAQLCA
NGDTASGLSLVLLPPACPGAPRSSLWEGELREIEGKIEEFRGNLRTALARRAELQRNLQK
ERQRERERDGSCLSITTHTNRRR
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgatggtctgcaggctcgtggcatatctctccgtgtctctgcacgcgcttatc
tccccgtgccagctccatcctcagccctgtggcatcctcgcgcacatagaacacaccgtc
cgcctcggcgccgtcctgccctcccgacagccctcgcgcgtccgagccgccgtgaaccgc
gcgctccttcacgccagaaaccgtccgcacgcgctcttaccgtacaacctgagcctggag
gtggtgtgggcgcgagcagcgcacgcggacccggagtcggtgttccggtgtgtgtgtcag
gacgtggtggtgcgcggggtgtcggcggtgctcgcgttcccacagagccaccaggagctc
gtgcaggtggactttatatccgcttttctgcagatccccttcatcagcatcatcgaggaa
ggtgaagcgcttcacacgcagaaccggttccacctgcagatgttgactcatgtccctgca
tctggattggctgagctgcttctgtcggtcctggtgcgagcagggtggcagggcggggca
gcggttatgtgccctggagggggcgacagtgggttgttggaacacctccagcaactgggt
ggtgccgggataaacggctcacactggcatctttgggaaacccttgacctttctagccac
atggcattagatgaagctaataacaacaataacaacaaatttgttttaaataaaaagcca
gactatacgtcacaggaaatagcggataaggaacaggaagttaaagatctcctgtctcag
ctcatgaaccgaaccccatccgctctgcattccagcgtggtggtgttcgggtcagaccca
gagtgtgtgagcttagttttgcgtgcagcggcacaactcagacacacactctgggttctc
ggactgcccctgaacctggacgctttaagtgctgtcggatccccaaaagatctgctagca
tacggacagacggagcgcagaccgctcagctcttacatcggagatgctctgcagctggtg
ggccgagccgtgtccgacgccagcatggttcgacctgacctgacgctcatccagaacatg
gtcaactgcttcgacaaacccaacaaacatgaggtgctgtcgtcaggacactacctgtcc
agatttctctccaacacgtcctttgagggtctgacaggtcatgtccaggttcatccctct
gtctctagagtttccaccacacagggcttccacatttggaccctccagagagatgctcta
ggtcagccgagctggaccacggtggctgaatggcattctggacacttagagatggagaag
aagagcatttggtcggatttaatgaaacatgaaatggatcaggttctgaccatccaaaca
ggaggacgttggcatcctggacttcctgtttctgggcataaaatccgtgttgtgactttg
gtggagcatccatttgtttttactcgcaaggctgatgaagatggccaatgccaagctggt
cagctttgtctggaccctcaaaccaaaaacttagatgttttgaataatcttttcagagct
ctagaacagaaaaacagcagtgtgttgccatcagagatggtcaaatgctgctatggattc
tgcattgatctgcttgagaagctcgctgaggacatgcagtttgattttgagctctacatt
gtaggggatggaaagtacggagcatggaaaaacgggcagtggactggactggtgggagac
ctgctgagtggtgctgctgacaccgctgtcaccagcttcagcatcaactctgcacgcagt
aaagtgatggacttcaccagctccttcttctccaccagcctggccatcctggtgcgaagc
aaggacacggccgcacccatcggtgccttcatgtggccgttacactggtccatgtgggtg
gggatcttcatcacgcttcacatcactgcacttttcctcacactgtacgagtggaagagt
ccgtttggactgacgcctcacggacgaaaccgggtccgagtcttctcctactcatctgct
ctcaacctgtgctacgctgtgctcttcggaagaaccatcgcaaccaagactccaaaatgt
tggactggaagattcctcatgaacctctgggcgatcttctgcctgctcgtgctttctagc
tatacagctaatttagcagctgtaatggtgggcgagaaaatatttgaggaggtgtcaggg
attcacgatgccaagctccaacatccgtctctggggttccgtttcggaacagtccatgag
agcagcgcagaagattacatgaagaagagttttcctgaagtgcacgagtacatgagacac
ttcaaccagcccaccacgccacaaggggtcgctacactcaagacagatcctcctcagctg
gacgcgttcatcatggataaagctctgctcgattaccaagtctccattgatgctgagtgt
aagctgctgacagtgggaaaacctttcgctattgaaggttatggaattggtttacctcgt
cattccccactgacccgtaacttttccgagctggtgaacagttataagtcggacggtttt
atggatctgctgcatgataaatggtacagagtcactcattgtggaaaacgaagcttggcc
gtcaccgagactctgcagatgggtatccagcacttctccggactctttgtgatgttgtgt
gttggtgttgtgggttcattactcacactgttgagtgaacacaccttctacagcttcatc
ttaccacatctgcacagccaacacagactgaagtactggctccacaccagccagaaaatc
cacagagctttaaatacagtgtgtgaggacaagaggactgacactgtcaacacaaacatt
cctctgtgtctgtcagaaggctgtaagctccactccctgccctccgctgatccctccatc
tcttcctccacctccaccaacaggtggaacagcggaagtcctgaagcgacaagcagtgaa
gccaaagatgtcaatcacaagcgtgtgcacttcgaactggagtccgagcgaggcgttaag
gacctggacggggcagtggaaggttctcagggggtcatggagcgctcggatggggcactg
tgtaacctgctggggtgggatcagggcagcaggaggctggatgggggcattaaaaagctg
ttgaggtcacagcgtggtgttagggggttagtgggcagcccccccgctcagttgtgtgcc
aatggagacacagcatcaggactcagcctggttctgctgccccccgcctgccccggggca
ccacgttcctctctgtgggagggggaactgcgggagatcgagggcaaaatcgaggaattc
cggggtaacctgaggactgcgctggcacggagagcagagctccagaggaacctgcagaaa
gagagacagagggagagagagagagatggcagctgtctctccatcacaacacacaccaac
aggaggaggtga
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