Tachysurus fulvidraco (yellow catfish): 113639672
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Entry
113639672 CDS
T08119
Symbol
grin2ca
Name
(RefSeq) glutamate receptor, ionotropic, N-methyl D-aspartate 2Ca
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04020
Calcium signaling pathway
tfd04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
113639672 (grin2ca)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
113639672 (grin2ca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tfd04040
]
113639672 (grin2ca)
Ion channels [BR:
tfd04040
]
Ligand-gated channels
Glutamate (ionotropic)
113639672 (grin2ca)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
NMDAR2_C
Motif
Other DBs
NCBI-GeneID:
113639672
NCBI-ProteinID:
XP_026997487
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All DBs
Position
15:complement(13027535..13080896)
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AA seq
1418 aa
AA seq
DB search
MGVRLGLLSDALWPPLLLMLLVCAWHCCWGRPFTMPDPTVNVAVVFSGSAYQVEIKGRLS
RENFLDLPLEVNPITVLVNDSNPRALLTRICDTLAANRVHGVVFEDNIGSEAVAQILDFI
STQTSVPIVGISGGSAVVLPYKDDGSNFLQLGASIEQQINGMFKVMEEYNWDSFAVVTSQ
YPGYEAFVDYIHSFTDTSYFLWELQNVLTFDMSSDSMNDLRARRLLQQIDAQVLLVYCSF
EEAQYLFSMAREVGLVGPGYIWIVPSLAVGNPNLPPPDSFPVGLISIITDRWKMSLRNRV
RDGVAIIVKSVESFHKHRGFVPDGHADCQSSPVQPENNDTLFRHMLNVSWDHTDFSFNSD
GYLVNPSMIVITLDRDRQWDKVGNYESGILQMRYPVWPRYGTYLEPVADNRHLTVATLEE
RPFVIVEAVDPSTGTCLSNTVPCRRQSNKTETIIGDTEPYTKLCCKGFCIDILKKLSRNI
KFSYDLYLVTNGKHGKLVRGVWNGMIGEVVYKRADMAIGSLTINEERSEIIDFSVPFVET
GISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVTVFVFEYFSPVGYNRSLVSA
KDPGGPTFTIGKSVWLLWGIVFNNSVPIENPKGTTSKIMVLVWAFFAVIFLASYTANLAA
FMIQEQYIDTVSGLSDKKFQKPQEQYPPFRFGTVPNGSTERNIRSNYPEMHSHMVKYNQK
GVEDALNSLKTGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALQKESRW
KRPIDLALLQFLADGDTQKLQTVWLTGICRNEKKEVMSSKLDIDNMAGVFYMLLVAMGLS
LLVFAWEHLLYWKLRHSVHKSERLDFLLAISRGIYSCFNGVEDTDQNGSIQSPDVTSSYT
QANMLKMLKTAKDIVSSARVENSLDNATKTIENWSRRAPEASKPILPTRLISTDASHGRL
PYISSVTSNHTPYTQRALTPTFPLHYGNSATLIEKPRVVTRPTTLRYTLPARTNHHHIYE
RTLPISSLSSPHIAMRDPPPPTAPKPHHSTRLFMDSQGCHQMAPSFLPYREFHVPDIYVE
HQDPPESRKLYNEGHGRKKRSHSYVAPSPEPRRRNDYDEPTSCLAELRANQLLENHAHTS
PCMGSHYQRPSGSCNSCMKPYLEPDTDDVPLLGKEKLNRRASFLRATWGGDKLWHVDEKP
STSASSSSRINMPDLFPRVVVANPKPSKMYANSSNNFCYNMPAEPAYLDPAHMGSYPYKP
QKLKYSHSTRLPSYREAILQNAAALRRSSSTVVHRHYSTYLNSYTDLPVYMGPLPQGPAH
FYDHSKDMCHLFPCINHCTNDATLVTRIGGRPIMYENTAFRGYEGAGCSREEPSLQPLHS
LPPSSKNRDRRQVLVARRLNSPYVPKPWGRVSSLESEV
NT seq
4257 nt
NT seq
+upstream
nt +downstream
nt
atgggcgttcgtctaggcctcctgagcgatgctctgtggccgccgttgctgttgatgctg
ttagtctgtgcctggcactgctgctggggccggccgttcacgatgcctgatccgactgtg
aacgtagcagtggtgtttagtggctctgcctaccaggtggagattaaagggcgcctgagc
cgggagaacttcctggacctgcctttggaggtgaaccccatcacagtgctggtgaatgac
agcaatcctcgggcactgttgacacgcatctgtgacacactggctgctaatcgcgtgcat
ggggtggtcttcgaggacaacatcggttctgaggctgtggcacagatcctggacttcatc
tccacgcagacgtctgtgcccattgtaggcatcagcggggggtctgctgtcgtcttgcca
tacaaggatgatggctccaacttcttgcagctgggtgcttccattgagcagcagatcaat
ggcatgttcaaagtaatggaggagtacaattgggacagttttgcagtggtgactagccag
taccctggttatgaggcctttgtggactacatccactccttcacagacacctcgtacttt
ctgtgggagctacagaacgtactgacatttgacatgtcatctgatagcatgaatgacctg
cgtgctcggcgtctgctacagcagatcgatgctcaggtgctgctcgtctactgctcattt
gaagaggctcagtatctctttagcatggccagagaagtgggcctggttggacctggttat
atttggatcgtccccagtcttgcagtgggcaaccccaatctcccaccacctgacagcttc
cctgttggcctaatcagcatcatcacagaccggtggaagatgagtctaaggaacagggtg
agggacggcgtggctatcatagtgaaatcggtggagagtttccacaagcacaggggcttt
gttcctgatggacatgctgactgtcagtccagtccagtgcagccagaaaacaatgacaca
ctcttcaggcatatgctgaatgtgtcatgggatcacacagacttttcattcaacagtgat
ggataccttgttaacccttccatgattgtcattacactggaccgggacaggcaatgggac
aaggtgggaaattacgagtctggtatactgcagatgcgctatcctgtctggcctcgttat
ggaacgtacttggagccagtggctgataaccgccatttaacagtagccacccttgaagaa
aggccatttgtgatagtggaggctgtagaccccagcactggcacctgcctcagcaacact
gtgccctgcagacgccagtcaaacaagacagagacgatcatcggtgatactgagccctac
accaaactgtgctgtaaaggcttttgcattgacatcctaaagaaactttcccgtaacatt
aagttctcctacgatctctatctggtcaccaacggcaaacatggcaagctcgtccgaggt
gtttggaatggcatgattggagaggtggtttataagagggcagacatggccattgggtct
ctcactataaacgaagagcgctctgagatcattgatttttcagtgccgtttgtggagaca
gggatcagtgtgatggtggccaggagcaatggaactgtgtctccgtctgcctttttggag
ccctacagccctgctgtgtgggtgatgatgtttgtgatgtgcctgacagtggtggccgtg
actgtctttgtgtttgagtacttcagccctgtagggtacaaccgtagcctggtcagtgca
aaagatcctggtgggccaacctttaccattgggaaatcagtgtggctgctttgggggatt
gtcttcaacaattctgtgccaatcgagaacccaaaggggaccacgagcaagatcatggtg
ctggtatgggccttcttcgctgtcatcttcctggcgagttacacagccaacctagcagca
ttcatgatccaagagcagtacattgacacagtttctggactgagtgacaaaaaattccag
aaaccacaggagcagtatccaccatttcgcttcggtacagtgcctaatggcagcacagag
cggaatataagaagcaactatcctgagatgcactcccacatggtcaagtacaaccaaaag
ggcgtggaagatgctttgaacagccttaaaactggcaaacttgatgcctttatttatgat
gccgccgtgctgaactacatggctggtaaagatgagggctgtaaactggtgaccattgga
agtgggaaggttttcgcaactacaggctacggcattgcattacagaaggagtcccgctgg
aaacggcccattgaccttgccctcctccagtttcttgctgatggtgatactcagaagctg
cagacagtgtggctaactggaatatgccgcaatgagaagaaagaagtgatgagctccaag
ctggacattgacaacatggctggagtgttctacatgttgctggtggccatgggtctcagt
ctgctggtgtttgcctgggaacacttgctctattggaaacttcgccactctgtgcacaag
tctgaacgcctcgacttcttactggcaatcagtaggggtatctacagctgcttcaatggt
gtggaggatacagaccagaacggaagtatacagagcccagatgtcactagcagttacacc
caggccaacatgctaaagatgcttaagacagccaaggatattgtctcctcagccagagtg
gagaactccttggacaatgccactaagacgattgagaattggagccgcagagctccagaa
gcttcaaaacctattcttccgacccgtctcattagcactgatgccagtcatggtcgtctt
ccctatatttccagtgtcaccagcaaccatacaccttacacccagagggcactgactccc
actttccccctgcattatggaaacagtgccaccttgatagagaaacctcgagtagtgaca
agacctaccacgttacggtacactcttcccgcacggacgaatcaccatcatatatatgaa
cggacactacctatttctagtctgagcagtccccatattgctatgagggaccccccacct
cctacagccccaaagccacaccacagcaccaggctattcatggacagccagggctgccac
caaatggccccctcctttctcccttaccgtgagttccatgtcccggatatctatgtggaa
caccaagaccctcccgagagccggaaactgtacaatgaaggacatggccgcaagaagagg
tcccacagctatgtggcaccgtcaccagaaccccggcgcaggaatgattatgatgaacca
acctcttgcctggctgagcttagagctaatcagctcctagaaaaccatgcccatacttca
ccctgcatgggaagccactaccaaaggcccagtggcagctgcaactcctgcatgaaacca
taccttgagccagatacggatgacgtccctttgctgggaaaggaaaaattgaaccgtcgc
gcctctttcctcagggccacatggggtggtgacaagttgtggcatgtagatgagaagcct
tcaacgtctgcatcttcttctagtcgaatcaacatgcctgacctctttccccgtgtagtg
gtagctaatcccaagccttcaaagatgtatgccaattctagtaacaacttttgctacaat
atgccagctgagccagcctatcttgacccagctcacatgggttcctatccttacaagcca
cagaaactcaaatactctcattctactcgccttccctcataccgtgaggcaattcttcag
aatgcagcagctctgcggcgatcttcttccacagtcgtgcacagacattactccacctac
ctgaactcttacactgacttgccagtatacatgggcccgcttccacaggggcctgcacat
ttctatgatcactccaaagacatgtgtcatctgttcccctgtatcaaccactgcacaaat
gatgctaccctggtaacccggataggtggaaggcctatcatgtatgaaaacactgctttt
agaggctacgagggtgctggatgttcacgtgaagaaccatctctgcagccactgcacagt
ttaccaccctcatctaagaacagggaccgcagacaggttttggtggcacggaggcttaac
agtccctatgtaccaaagccctggggcagagtgtctagtctggagtctgaagtctaa
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