Tachysurus fulvidraco (yellow catfish): 113643977
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Entry
113643977 CDS
T08119
Symbol
vcam1b
Name
(RefSeq) vascular cell adhesion protein 1b
KO
K06527
vascular cell adhesion molecule 1
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
113643977 (vcam1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
tfd04090
]
113643977 (vcam1b)
04091 Lectins [BR:
tfd04091
]
113643977 (vcam1b)
CD molecules [BR:
tfd04090
]
Proteins
113643977 (vcam1b)
Lectins [BR:
tfd04091
]
I-type lectins (Siglecs)
113643977 (vcam1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
I-set
ig
C1-set
ICAM1_3_5_D2
C2-set_2
ICAM_N
Adhes-Ig_like
DUF2808
OstA_2
Lipoprotein_23
PilS
Motif
Other DBs
NCBI-GeneID:
113643977
NCBI-ProteinID:
XP_047661490
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Position
2:complement(31576280..31582133)
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AA seq
649 aa
AA seq
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MLVDLKNFNMASVLCALLQFLLCYTAVSSLSVKISPLKPLFQVGHREKITCQADQCNGKM
TFSWQNLEDMPLNAEIQTSSNKSTLLYKSVQEHHEYSIVCKLTCQGNPKEGSMKIKVYSF
PNDPVVSGHDNLVLGKENTMTCKVSDVYPAEHMTVEWLRGGNVVHTQEGEYGIKSIQSKY
TFKPKLNDTGELITCRVTLSLDNLPPERRTRHTTVSMAVFSPPLLVSLQPNSSFIRVERG
SSMTLFCNSSGCPHSHITWKNERHQPRLSSTADSEAFVSQLGPWTVGLEDNRTFICEAQC
GSVVKSKHTEIMVYSFPSDPAIEISGSFMEGKVTNLTCTVHDIFPVDCFHMQWMYGELEL
QSVRGNFSDKLQNLSLTIPIKPKDSDQNKMFTCKVSLKIGKQDWKLQKTANTTLAVQYSP
KNTTIDVRPQKQLNEGETVTISCQTASYPEGHVTLSRVWNGEETKLVSSNGTQTSFSISY
TNVSHSGIYVCEAVNRYGHQREMVQITVQAPPRNITVTVYPSNMVHEGETVTVGCQYVSF
PPSEITLRKLDNGSDIYSSNGTFLLVNLTANSSGLYQVTATNALGSEIKIFTLNVTSNKI
ESPLLKRIHSIDFIIPVIGLGVLATVLSTLDCIRRVKRNGLYEMTEGIP
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgttagtggatttaaagaatttcaacatggcttcagttctatgtgctctcctgcagttc
ctcctctgctatacagcagtttcctctctatcagtgaagatcagtccattgaagccactg
tttcaagtgggacacagagagaagatcacgtgtcaagcggatcaatgcaatggcaaaatg
acattctcctggcaaaatttagaggacatgcccttgaatgctgaaatccagacgtcttcg
aataaatcaactttgctctacaaaagtgttcaagaacatcatgaatattcaattgtgtgc
aagctaacctgccagggcaatcccaaggagggaagcatgaaaatcaaagtgtactctttt
ccaaatgatccagttgtctctggacatgacaatttggtgctagggaaggagaacaccatg
acctgcaaggtttcagacgtttatccagcagaacacatgacagtggaatggctgagagga
ggaaacgtggtccacacacaggaaggagaatatggaattaaatccattcaatccaagtac
acctttaaaccaaagctcaatgacacaggagagttaataacttgtcgggtcacactcagt
cttgataacctgccaccagagaggagaaccagacataccactgtgtccatggctgtcttt
tcccctcctctgctggtgtccctgcagccaaattcgagcttcatccgagtagagcgaggt
tcctctatgacactgttctgcaatagctcaggctgtcctcactctcatatcacctggaag
aatgaaagacatcaaccacgtctgagcagtactgctgacagcgaggcattcgtatcccag
ttaggcccatggactgttggtctggaggataaccgaacattcatttgtgaagctcaatgt
ggctctgttgtgaagtccaagcacacagagattatggtttactcctttccctcagatcct
gccattgaaatttctggatcctttatggaagggaaagtgaccaacctgacctgtacagtt
catgacatcttcccagtcgactgttttcatatgcaatggatgtacggagagcttgagctg
cagtcagtccgtggaaatttctcagacaagcttcaaaaccttagcttaactatccccatc
aagcctaaggacagtgaccaaaataagatgtttacctgcaaggtatcactaaagatcgga
aaacaagattggaagttacagaagacagcaaataccacactggcagtacaatattcaccc
aagaataccaccattgacgtgagaccccagaagcaactgaatgaaggggagactgtgact
atctcctgccagactgccagttatccagagggacatgtgactttaagtagggtgtggaat
ggagaagagactaaattagtttccagtaatgggacccaaacctcttttagcatatcctat
actaatgtatcacactctggcatctacgtgtgtgaagctgttaacagatatggccatcag
agagagatggtccagataactgtacaagcacctccaaggaatatcacagtgacagtatac
ccttcaaacatggttcatgagggtgaaacagtcacagttggctgccagtatgtgagcttt
ccaccatctgaaattaccttaaggaaactggacaacggaagtgacatttactcttccaat
gggaccttcttgctggttaacctcactgccaacagctcaggactgtaccaggtcactgct
accaatgccctgggttctgagattaagattttcacactaaatgtaacaagtaataaaata
gaatcacctctgttaaaaagaattcattcaattgattttataattccagtcattggtctg
ggagttctggctacagtactcagtaccctagactgtataagaagagtaaaaaggaatggc
ttgtatgagatgactgaaggcataccataa
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