Tachysurus fulvidraco (yellow catfish): 113647048
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Entry
113647048 CDS
T08119
Name
(RefSeq) histone-lysine N-methyltransferase PRDM9-like isoform X1
KO
K20796
[histone H3]-lysine4 N-trimethyltransferase PRDM7/9 [EC:
2.1.1.354
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd00310
Lysine degradation
tfd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
113647048
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tfd03000
]
113647048
03036 Chromosome and associated proteins [BR:
tfd03036
]
113647048
Enzymes [BR:
tfd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
113647048
Transcription factors [BR:
tfd03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
113647048
Chromosome and associated proteins [BR:
tfd03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
113647048
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
113647048
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
PRDM2_PR
zf-C2H2_4
zf-met
SET
zf-C2H2_jaz
Zn-ribbon_8
zf-C2H2_11
zf-C2H2_6
Zn_ribbon_SprT
zf-C2HC_2
zf_PR_Knuckle
DUF6568
Motif
Other DBs
NCBI-GeneID:
113647048
NCBI-ProteinID:
XP_027009405
LinkDB
All DBs
Position
1:complement(17711230..17716615)
Genome browser
AA seq
618 aa
AA seq
DB search
MCGSCPVHTAHAHTCAAHIGQGCRAGSDTSVLLKDVEMETCVNSAEKTSSFLGRIIIVNE
ENGGFQTSLKEEPKDEYLLCGETSDCVDHQNEEFQMKLIKEEEAEDEDFLYCEICKSFFI
NKCELHGSPVFIPDTPVLIGVWDRARQTLPTFLEIRKSDIPDAGLGVFNTGGTVPVGVHF
GPYEGELVDREEAMNSGYSWVISSRTQCEQYVDAKREINSNWMRYVNCARSDDEQNLVAF
QYRGGIFYRSSRPIEPGQELLLWYEEEYAKDLSIAFHYLWKKKCFANGMNSTQVFSCSSC
PASYTSQVYFHKHVRRCHYEEYLRLLNSGEIKFETLMPTRHSSSQQTPSGSLGTNASHEE
KQQERLHCSDCGKSFSQLSILQLHQCIPTGKKTHQCSSCGKSFSNKGTLIRHERIHTGEK
PFHCTQCGRSFTQKSHLQTHERIHTGEKPFQCSHCGKSFNHQSHLQQHQRIHTGERPYRC
TQCGRGFTHLGHLQQHQRTHTGEKPFQCSECGKSFNHQNNLQTHQRIHTGEKPYHCTLCG
KSFIHQSHLQFHQHIHTGEKPFQCSVCGKCFNRASHLQQHQRTHTGEKPYQCSVCGKRFT
RNTHLQKHQHKHTTETAY
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgtgcggctcttgcccagttcacacagcgcatgcgcacacatgcgcagcgcacattggg
caggggtgcagagcgggcagtgacacctccgttctgttaaaggatgtggagatggagacc
tgtgtgaactctgctgagaagacatcaagctttttgggacgtatcatcattgtgaatgaa
gagaacggtggattccagacatctcttaaagaagaacctaaggacgaatatctcctctgt
ggagaaacatccgactgtgtggaccaccagaatgaagaattccaaatgaaacttataaaa
gaggaagaagctgaagatgaagactttctttactgtgagatttgtaaatctttcttcatc
aacaagtgtgagcttcacggttcaccagtcttcatccctgatactccagttcttatcggt
gtttgggaccgagccagacaaactcttccaacgtttctggagattcggaagtctgatatt
ccagacgcaggtctgggagtgtttaatacagggggcacggttccagtaggtgtgcacttt
gggccttatgagggagagctggtagaccgagaggaagccatgaacagcggctactcctgg
gtgatctccagcaggacacagtgcgagcagtacgttgatgccaagagagagataaactct
aactggatgaggtatgtgaattgtgctcgtagtgatgatgaacagaatttggttgctttt
cagtaccgagggggaattttctaccgttcctctcgacccattgaaccaggacaggagcta
ttactgtggtatgaagaggaatacgccaaagatctcagcatcgcctttcactacctctgg
aagaaaaagtgctttgcaaatggaatgaacagcacacaagtgttctcctgctcttcgtgt
ccagcctcctacacttctcaagtttactttcacaaacatgtcagaagatgccactatgag
gagtatttgagactgctgaattcaggagagattaaatttgagactctgatgcccacacgc
cactccagtagtcagcagacaccctctggttctctggggacgaacgcctctcatgaagaa
aagcagcaggagcgccttcactgctcagattgtgggaaaagtttttctcagctgagtatt
ctccagttacaccaatgcattcccacgggaaaaaaaacgcatcagtgttcatcgtgtgga
aagagtttcagtaacaaaggaactcttatacgacacgagcgcattcacaccggagagaaa
ccgttccactgcacacagtgtgggaggagttttactcagaaaagtcaccttcaaacacat
gagcgcattcacaccggagaaaaaccattccagtgctcacactgtgggaagagctttaat
caccagagtcacctccaacaacaccagcgcatccacaccggagagcggccgtatcggtgc
acacagtgtggccgcggttttactcacctcggtcacctccaacaacaccagcgcactcac
actggagaaaaaccatttcagtgctcagagtgtgggaaaagttttaatcaccagaataac
ctgcaaactcaccagcgcattcacactggcgagaaaccgtatcactgcacgctgtgtggg
aaaagtttcattcaccagagccatctccagttccaccagcacatccacaccggagagaag
ccgttccaatgctcagtttgcgggaaatgttttaatcgagcaagccaccttcaacaacac
cagcgcactcacacaggcgagaaaccgtatcagtgctctgtgtgcgggaaacgttttaca
cggaatactcatctacaaaaacaccagcacaaacacacaacagagacggcgtattaa
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