Tachysurus fulvidraco (yellow catfish): 113650423
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Entry
113650423 CDS
T08119
Symbol
spata5l1
Name
(RefSeq) spermatogenesis-associated protein 5-like protein 1
KO
K26051
ribosome biogenesis protein SPATA5L1 [EC:
3.6.4.10
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tfd03009
]
113650423 (spata5l1)
Enzymes [BR:
tfd01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.10 non-chaperonin molecular chaperone ATPase
113650423 (spata5l1)
Ribosome biogenesis [BR:
tfd03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
113650423 (spata5l1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_5
AAA_16
RuvB_N
AAA_22
AAA_14
AAA_7
TIP49
AAA_33
DUF815
Viral_helicase1
AAA_25
bpMoxR
NTPase_1
Mg_chelatase
RNA_helicase
AAA_11
AAA_19
Rad17
NACHT
ABC_tran
AAA_17
Vps4_C
MCM
AAA_30
Spore_III_AA
ATP-synt_ab
Motif
Other DBs
NCBI-GeneID:
113650423
NCBI-ProteinID:
XP_047678085
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All DBs
Position
13:27995288..28000515
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AA seq
763 aa
AA seq
DB search
MPQDLQVLPPDHSDIGTQRCRLGPTVMEDLKLRLGSPVLVTLPGGASCLCTAWPRPDLAD
AYLQLDTTCSSPDLDPKALHGLRLGVERLRALRCPCVKRLHVTALVQSDEYKQRTSVQVV
RALAAELLMGLYVHNKHLVNISHTGTPVQFLQVDSLNSGSLEAGRVTSETCLELVSVRTV
ETHRRWARDSYAVDLGGLEEVQASLKEMLTLPLRYPLSTQHVGVAGGRSALLVGPPGVGK
TQLVRSVVRDVQAALVMVSGPVVVGSRPGESEENLRAAFTKASEAARDEACVLFIDEIDA
LCPKRSFSTGNPENRLVAQLLTLMDGICSSEGFVIIGATNRPDALDPALRRPGRFDREIV
VGVPTLQQRYQVLQCVCRSVPLSTSVDLKSIAEMTSGYVGADLSALSREAALQALLHSTQ
GGADSVQSGGEDGKVRMEHFLKALRLVPPSCLRSSVGVAEFKPVTWERIGGLEEVKLKLR
QSVEWPMKFPEAFVRMGVCRARGVLLYGPPGCAKTTLVKAAASSSHCSFLTLSGAELYSP
YVGDSEKALAQLFRQARACSPAIVFLDEIDGLVGCRDTGGGCRGSSVQAQVLSVLLNELD
GVGFKTTERRETGQSERDNKRTPRDQQMQLQELCNQDVMIVAATNRPDMLDSALLRPGRF
DHIIYVPPPDLQARLNILQLHTEKMPLNSDVCLEDLATQTNLFSGADLESLCKEAALLAL
HEEGMSVSAVQQKHFQKVLHTFQPSISPQQILQHQQLFKHNYS
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgccccaggatctgcaggttctccccccggaccactcggacattgggactcagcgatgt
cgtctcggcccgacagtgatggaggatcttaagctgcgtctcgggtctccggtgctggtg
acgctgccgggcggagcttcctgtctctgtacggcgtggccacgtccggacctggccgat
gcttacctgcagctggacaccacctgctcttctccagacctcgacccgaaagctctccat
ggactccgccttggggtggagcggctcagggctctgaggtgtccgtgtgtgaagcgtctg
cacgtgactgccctggtgcagagtgacgagtacaaacagaggacatctgtgcaggtggtc
agagcgctggctgcggagctgcttatggggttgtatgtccacaacaagcacctggtgaac
atctcacacacaggaaccccagttcagttcctgcaggtggacagcttgaactcggggtct
ctcgaagcgggacgtgtgacgtccgagacttgtctggagctggtgtcggttcgtacggta
gaaacacaccggcgctgggcacgtgatagttatgctgtggatttgggtggactggaggag
gttcaagcctcgctgaaggagatgctgacgctcccactgcgttatccactcagcacacag
catgtgggcgtggcaggggggcgtagcgcattgctggtcgggcctccaggcgtggggaag
acacagctggtgcgcagtgtggtgcgggacgtgcaggcagcactggtgatggtgagtggg
ccagtggtggtggggtcacgacctggagagagcgaagagaatctgcgtgctgcgtttact
aaagcctcagaagcagccagagatgaagcctgtgtgctcttcatagacgagatcgacgct
ctgtgtccgaaacggagcttcagcaccggaaacccggagaaccgactcgtcgctcagctc
ctcaccctcatggatggaatctgcagcagtgaaggttttgtcatcatcggagccaccaac
cggccagacgccctggacccggcgctcaggagacccggtcgcttcgacagagagatagtt
gtaggtgttcccactctgcagcagaggtaccaggttctgcagtgtgtgtgtcgcagtgtt
ccgctctccaccagtgtagatctaaagtccattgcagagatgaccagcggctacgtgggg
gccgatctgagcgcgctcagtagagaggcagcgctgcaggcactactgcactctacacag
ggcggagctgattcggtccaatcaggaggtgaagatgggaaagtgagaatggagcatttc
ctgaaagctctgcgattggttcctccgtcctgcttgaggagcagtgtgggcgtggccgag
tttaaacctgtcacctgggagcgaatcggaggactggaggaagtaaagctcaaactcaga
cagagtgtggagtggccaatgaagttccccgaggcatttgtgcgtatgggtgtgtgtcgt
gcgaggggtgtgttactgtacggaccgccgggctgcgctaagaccacgctggtgaaagca
gctgcatcttcatcacactgcagcttcctcacattgagtggggcagagctttactccccc
tatgtaggggactccgagaaggcacttgctcagctgttccgtcaggcgcgggcgtgttct
cctgccatcgtgtttctggacgagattgacggcttggtgggatgtcgtgacaccggaggc
ggttgccgtggcagcagtgtacaggctcaggtgttgtctgtcctgctgaatgagttagat
ggtgtgggcttcaaaaccactgagagacgagagacaggacagagtgagagggataacaag
agaacacctcgagaccaacagatgcagctacaggaattatgtaatcaggacgtcatgata
gtcgctgccactaacaggccggacatgttggacagcgctctgcttcgcccgggccgattt
gaccacatcatatacgtccccccacctgacctacaggctcgtctgaacatcctgcagcta
cacacagagaaaatgccgctgaactcggatgtgtgtttggaggatctggcaactcagaca
aacctgttctctggagcggatctggaaagcctctgcaaggaggcggctctgttagctctt
catgaagaaggtatgagtgtgtcagcggtgcagcagaaacacttccagaaggttttacac
acttttcagccatctatcagcccacagcagatcctgcagcaccagcagctcttcaaacac
aactacagttag
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