Tachysurus fulvidraco (yellow catfish): 113661083
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Entry
113661083 CDS
T08119
Symbol
polr1b
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
113661083 (polr1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tfd03021
]
113661083 (polr1b)
Enzymes [BR:
tfd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
113661083 (polr1b)
Transcription machinery [BR:
tfd03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
113661083 (polr1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
113661083
NCBI-ProteinID:
XP_027030843
LinkDB
All DBs
Position
4:20506497..20514392
Genome browser
AA seq
1133 aa
AA seq
DB search
MDHAQKWSVLPTAPSLKHLTEAGFGLPKEKQHEAVQDLVKAHIESFDQAVTDGLCRVVQA
IPPLEFLYKGDRISLSFVEAAIHKPAVGKGGICKDLHVYPAECRGRRCTYRGKLMADVSW
SVNGIPKGIIKQSLGQVPMMVKSKLCNLHGLSPKELIEHHEEAEEMGGYFIVNGIEKVIR
MLIMPRRNYPIALSRPKFKSRGQGYTQYAISVHCVREQHTSINMNLHYLDNGTVMLNFIY
QKELFFLPLGFALKALVDFSDYQIYQELIKGREENSFFKSCVSEMLRLVMEEGCTTRGKV
LDYLGERFRVKLNLPEWYTHEQCARFLMDECLCIHLKSDTEKFYMLCLMTRKLFAFAKQE
CMEENPDSLMCQEVLTPGQLFLMFLKEKMTGWLVSVKLALDKRGQRFTALTTDNLTKIFN
MGTDLTKAFEYLLATGNLVSKTGLGMLQASGLCVVADKLNFIRYLSHFRCVHRGAAFAKM
RTTAVRKLLPESWGFLCPVHTPDGAPCGLMNHLTTHCEIVAPVHPTTTIPALLCTLGVTP
VDGTPGQPYSCCYPVILDGTMIGWVEKDLAPVLVDSLRRFKVLKEKKIPPWTEIVLVPQT
GKASLYPSLYLFTTPCRMVRPVRNLALGKEELIGTFEQIYLNVGIFEDEIEHGVTTHQEL
FPHSMLSVVASFIPFSDHNQSPRNMYQCQMGKQTMGFPLHSYQDRSDNKLYRLQTPQSPL
VRPLMYDHYNVDNYPIGTNAIVAVISYTGYDMEDAMIVNKSSWERGFAHGSVYKTEIVDL
SLKAKGEDSMVFGIKSGDPKVSGRLDADGLPPIGSKLNYGDPFYSYINLNTGQSYVTFYK
SQESCVVDNIKACSNDAGTGRFKRVCITMRVPRNPTIGDKFASRHGQKGILSRLWPAEDM
PFSESGMTPDILFNPHGFPSRMTIGMLIESMAGKSAAMHGLCHDATPFTFSEKNSALEHF
GTLLKAAGYNYYGTERLYSGLSGLELEADIFVGVVYYQRLRHMVSDKFQVRTTGARDKVT
NQPVGGRNVQGGIRFGEMERDALLAHGSSFLLHDRLFNCSDRSIAQVCVRCGSLLSPLLE
KPPPHWSATRHRNTICSLCKKSDAIDTVAVPYVFRYFVAELAAMNIKIKLDVK
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atggatcacgctcagaagtggagcgttttaccaactgctccgagtttaaaacacctcaca
gaggcaggatttgggcttcctaaagagaaacagcacgaagctgtgcaggatttagtgaaa
gcgcacatcgagtcatttgaccaagcggttactgatggactgtgccgagtggttcaggcc
attcctcctctggagttcctgtacaagggcgacagaatcagcctgtcgtttgtggaagct
gctatccacaagcccgctgttggcaaaggtgggatctgcaaggatctccatgtgtatcct
gctgaatgtagaggaaggaggtgcacatacagaggaaaattaatggcagatgtcagttgg
tcagtcaatgggatccctaaaggaattattaagcagtcgttaggacaggtacccatgatg
gtgaaatccaaactctgtaatctccacggactctcgcctaaagagctaatagagcaccat
gaagaagcagaggaaatgggaggctactttatagtgaacggcatcgagaaggtgatccgc
atgcttatcatgccaaggaggaactaccccatcgccttgtcaagaccaaagtttaaaagt
agaggtcaaggctacactcagtatgcaatttcagtgcattgcgtgagagaacaacataca
tccattaacatgaaccttcactacctggataatggaacggtcatgctgaacttcatttat
cagaaagagctctttttccttcctctgggcttcgctcttaaggccttagtggacttctca
gactaccagatctaccaggagctaataaagggcagagaggagaactccttctttaagagc
tgtgtgtcagagatgctgcgcttggtgatggaagaaggctgtactaccagagggaaggtg
cttgactatctaggagaacgctttcgggtcaagctgaacttgcctgagtggtacacacat
gagcagtgtgctagatttctcatggacgagtgtttgtgcattcaccttaagtctgacact
gagaagttctacatgctttgtctgatgacacgaaagttgtttgcttttgccaaacaggag
tgtatggaggagaatccagacagtctgatgtgtcaggaggtcctcacacctgggcagctt
tttctcatgttcctgaaggagaaaatgactggttggctggtttctgtgaaactggcattg
gataaaagaggccagcgattcacagcattgaccacagataacctgactaaaattttcaac
atgggcactgacctcaccaaagcctttgagtacctgctggctacaggaaacctcgtctct
aagacaggtctgggtatgctgcaggccagcggtctgtgcgtggtggctgacaagctaaac
ttcattcgatatttgtcccacttccggtgtgtgcacagaggagcagcgtttgccaagatg
aggaccacagcagtgagaaagcttttacctgagtcctggggcttcctgtgtcctgtgcac
acacctgatggagcaccatgtggtctgatgaaccacctaacaacccactgtgagattgtg
gctcctgttcaccccactactacaatccctgccttgctctgcacactaggtgttacgcca
gtggatggaactcctggtcagccgtactcctgctgctatcctgtcatactggatggcacc
atgatcggttgggttgagaaagatctcgcacccgttcttgttgattctctccgcaggttc
aaggtgctgaaggagaaaaagattcctccgtggactgaaattgtgctagttcctcaaacg
ggtaaagcaagcttgtacccaagcctgtacctgttcacaacaccgtgtcgcatggtgcga
ccagtccgcaacctcgccttgggaaaagaggagctcattggcaccttcgaacagatttac
ctgaatgtagggatatttgaggatgagattgagcatggtgtcaccacccatcaggaactc
ttcccccacagcatgctcagtgtggtggccagcttcatccccttctcagatcataatcag
agtcctaggaacatgtaccagtgccagatgggtaaacagactatgggtttccctctgcac
tcgtatcaggatcgctcggataataaactttaccgcttacagaccccccagagtccactg
gtccgtcctctcatgtacgaccactacaacgtagacaactatcccattggcacgaacgct
atagtggctgtgatctcttatactggctacgacatggaagatgcaatgattgtgaacaag
tcttcctgggaacgtggttttgcccacggctctgtctataagactgagatcgtggacctg
tccttgaaggccaaaggtgaggacagcatggtgtttgggattaaatcaggtgacccaaag
gtgtctggcaggttggatgcagatggattgccacctataggatccaagctaaattacgga
gaccctttttacagctacatcaacctcaacacaggccagagctatgttaccttctacaag
agtcaggagagttgtgtagtggacaacataaaagcatgcagcaatgatgcaggaacaggc
cgcttcaagcgtgtgtgcattactatgcgagtaccacgcaaccccaccattggagacaag
tttgccagcaggcatggccagaagggtatcctgagtcgcctgtggccggctgaggacatg
cctttcagtgagagtggcatgacccctgacatcctgttcaacccgcatggctttccgtca
cgcatgaccatcggcatgctgatcgagagcatggcgggcaaatctgcagcaatgcacggc
ctgtgccatgacgctacgccgttcaccttctctgagaagaattcggccctggaacatttt
ggcaccctgctgaaggcagcaggttacaattattacggcacagagcgtctctactcagga
ctcagcggactggaactggaggctgacatctttgtaggtgtggtttattaccagcgtctg
cgccacatggtctcggacaagttccaggtgaggacgacgggtgcgagggacaaagtgacc
aatcagccagttggagggaggaacgtgcagggtggcatccgctttggagagatggagcgt
gatgccctgctggcccatggctcatcctttctgctgcacgatcgtctgtttaactgctcg
gaccgatccatagctcaggtgtgtgtgcgctgtggcagtttgctatctccactgctggag
aagccaccccctcactggtcagccacacgacatcggaacactatctgctcactgtgcaag
aagagtgatgctatcgacacagtggctgtcccctatgtgttccgctactttgtggctgaa
ctggcggcaatgaacattaaaattaaactagatgtgaagtag
DBGET
integrated database retrieval system
