Thermosipho ferrireducens: JYK00_00965
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Entry
JYK00_00965 CDS
T07656
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
tfe
Thermosipho ferrireducens
Brite
KEGG Orthology (KO) [BR:
tfe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tfe03009
]
JYK00_00965 (rimO)
Enzymes [BR:
tfe01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
JYK00_00965 (rimO)
Ribosome biogenesis [BR:
tfe03009
]
Prokaryotic type
ribosomal protein modification factors
JYK00_00965 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
HAT_KAT11
DUF2119
MADF_DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
QTA38146
LinkDB
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Position
192868..194163
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AA seq
431 aa
AA seq
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MKIYIEMLGCPKNEADCSNLKGYLKKLGYELVDNINKANAVIIDTCGFILEAKKESIEEI
LLNVERKKKDKNYKVFVTGCLVQRYSKELEKEIPEVDGWYGILPPKTIAEKIGKEKKLIS
TTPEPIYHFEDRVDESFQYAYVKIADGCDRACSFCTIPYFKGPFKSRNIEDIKKEVEILV
KRGKKEIILVAQDTTGYGVDIYGKQALPELLKTLNDIKGDFWIRVMYMHPDHITDEIIDA
FQFSKVLKYFDVPVQHGSDQILTMMNRTKKSEDLKKLINKIRNIYPQAIVRTSIIVGFPG
ETDEDFEKLLEFVNEMEFDRLGTFIYSDEEEASSYTLDKKVSREIAQERLDILMEAQARI
SFEKNQKYLGRKIKVLFDEENDGVLLGRSYMDAPEIDGNIFVKGNYREGFCTVKINAADV
YDLEGELVEEG
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaatttacatagaaatgctcggttgtcctaaaaatgaagccgactgttcaaattta
aagggatatctaaaaaaattaggatacgaattagttgataatattaataaagcaaacgca
gtaatcattgatacatgtggctttatacttgaggcaaaaaaagaatccatagaagaaatt
ttattaaatgttgaacgaaaaaagaaagataaaaattataaagtatttgtcacaggatgc
ctggtgcagagatatagcaaagagcttgaaaaagaaatccccgaagtagatggatggtat
ggaattttacctccaaaaacaatagctgaaaaaataggaaaggaaaaaaaattaatatct
accacacctgaacctatttatcactttgaagatagagtagatgaaagttttcaatatgcc
tatgtaaaaatagcggatggttgtgatagagcatgctcattttgtaccattccatacttt
aaaggcccttttaaaagcagaaatattgaagatataaaaaaagaagtggaaatattagta
aaacgtggaaaaaaggaaataattctcgtcgctcaggatactacaggctatggggtagac
atttacggaaagcaggcgctgcctgaattattaaaaactttaaacgatataaaaggagat
ttctggataagagttatgtatatgcatcctgaccatattacagatgaaattatagatgct
tttcagttctcaaaagttttaaaatattttgatgttcctgttcaacacggaagtgatcaa
atattaaccatgatgaatagaacaaaaaagtcagaggatctgaaaaaacttatcaacaaa
ataagaaatatatatccacaggccatcgtaagaacaagtataattgtaggttttccagga
gaaacagatgaagattttgaaaaacttctggaatttgtaaatgagatggaatttgacaga
cttggaacttttatttactcagatgaagaagaggcatcatcttatacgctggacaaaaaa
gtaagccgcgaaattgcccaggaaaggcttgacatactcatggaagctcaggccagaata
tcttttgaaaaaaaccaaaaatacttaggaagaaaaataaaagtcctctttgatgaagaa
aatgatggagtacttcttggccgttcatatatggatgcacctgaaattgatggaaatatt
tttgtaaaaggaaattacagggaaggtttttgtacagtaaaaatcaacgcagcagatgtc
tatgacctggaaggagagttagtagaggagggttaa
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