Tepidiforma flava: O0235_04980
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Entry
O0235_04980 CDS
T08993
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
tfla
Tepidiforma flava
Brite
KEGG Orthology (KO) [BR:
tfla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tfla03009
]
O0235_04980 (rimO)
Enzymes [BR:
tfla01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
O0235_04980 (rimO)
Ribosome biogenesis [BR:
tfla03009
]
Prokaryotic type
ribosomal protein modification factors
O0235_04980 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
WBL36918
LinkDB
All DBs
Position
816886..818229
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AA seq
447 aa
AA seq
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MAVPRTYHLVTLGCPKNDVDSSHLARLLEGGELLPVADPREADAIIVNTCGFIEQSQAQS
MAAVKELAAAKRDGQTLIVAGCMTQLYGREVKEGTPGIDHVFGVGQWHEVAKLLQVDVDA
IYDIPESNVRVAGPSAYLKISDGCDAPCTFCVIPKIKGGLRSAPAGLLVKEAQRLAAAGA
KELVLVGQDTTAWGEDLGMPAGSGLPGLLRMLSEAVPGTWLRLMYAYPSRVTPELIAAMA
ELPNVVHYLDVPLQHGSEAVLRRMKRPHNLEKVHRFIEELRAAMPDIVLRTSFIAGFPGE
TEAEFEELLAFAQAVEFDHAGCFTYSRQQWTGAYGMEGQVPDEVKAERRERFMAMQQEIS
ARRAARFIGRELDLLVEGTGEDEDGRPVVAGRTYREAPEVDGLVFARGRAEPGERVRVRI
EDAGAYDLFGRVLGGGGPRRRGRAISP
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgccgcggacgtaccacctcgtgacgctgggctgcccgaagaacgacgtggac
agttcgcacctggcgcggctgctggagggcggcgagctgctgccggtggcggacccgcgg
gaagccgacgcgatcatcgtgaacacctgcggcttcatcgaacagagccaggcgcaatcg
atggcggcggtgaaggagctggcggcggcgaagcgggacgggcagacgctcatcgtggcc
gggtgcatgacgcagctgtacgggcgggaggtgaaggaggggacgccgggcatcgaccac
gtgttcggcgtggggcagtggcatgaggtggcgaagctgctgcaggtggacgtggatgcg
atctacgacatcccggagagcaacgtccgggtcgcggggccgagcgcgtacctgaagatt
tcggacgggtgcgatgcgccgtgcacgttttgcgtgatcccgaagatcaagggcgggctg
cgctccgcgcccgcggggctgctggtaaaggaggcgcagcggctggcggcggccggcgcg
aaggagctggtgctcgtcgggcaggacacgacggcgtggggcgaggacctcgggatgccg
gcggggagcgggctgccgggcctgctgcgaatgctgagcgaggcggtgccggggacgtgg
ctgcggctgatgtatgcctacccgagccgggtgacgccggagctgatcgccgcgatggcg
gagctgccgaacgtggtgcactacctcgacgtgccgctgcagcacgggagcgaggcggtg
ctccggcggatgaagcggccgcacaacctcgaaaaggtgcaccggttcatcgaagagctg
cgggcggcgatgccggacatcgtgctgcggacgtcgttcatcgccgggttcccgggggag
acggaggcggagttcgaggagctgctggcgttcgcgcaggcggtggagttcgaccatgcg
ggctgcttcacctattcgcggcagcagtggacgggggcatacgggatggaggggcaggtg
ccggacgaggtgaaggcggagcggcgggagcggttcatggcgatgcagcaggagatctcg
gcgcggcgtgcggcgcggttcatcggccgggagctcgacctgctggtggaggggaccggg
gaggacgaggacggccggccggtcgtcgccgggcggacgtaccgggaggcgccggaggtg
gatgggctggtgttcgcgcgcggccgggccgaaccgggggagcgggtgcgcgtgcggatc
gaggatgccggggcgtacgacctcttcgggcgggtgctgggcgggggcgggccgcgccgg
cggggccgggcaatctccccgtaa
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