Tannerella forsythia: BFO_1001
Help
Entry
BFO_1001 CDS
T01682
Symbol
polA
Name
(GenBank) DNA-directed DNA polymerase
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
tfo
Tannerella forsythia
Pathway
tfo03030
DNA replication
tfo03410
Base excision repair
tfo03420
Nucleotide excision repair
tfo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tfo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BFO_1001 (polA)
03410 Base excision repair
BFO_1001 (polA)
03420 Nucleotide excision repair
BFO_1001 (polA)
03440 Homologous recombination
BFO_1001 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tfo03032
]
BFO_1001 (polA)
03400 DNA repair and recombination proteins [BR:
tfo03400
]
BFO_1001 (polA)
Enzymes [BR:
tfo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BFO_1001 (polA)
DNA replication proteins [BR:
tfo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BFO_1001 (polA)
DNA repair and recombination proteins [BR:
tfo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
BFO_1001 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BFO_1001 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
HHH_2
HHH_5
HHH
Motif
Other DBs
NCBI-ProteinID:
AEW20637
UniProt:
G8UQK3
LinkDB
All DBs
Position
complement(1082076..1084880)
Genome browser
AA seq
934 aa
AA seq
DB search
MKLLLIDAYALIYRSYYAFIKTPRMNSKGMNTSATFGFINTLEDVLRRETPTHIAFGFDP
PGPTFRHEAYEAYKAQREETPEDIRIAIPYIRKIIAAYRIPVLEMPHYEADDVIGTIAKQ
AEQEGFKVLMMTSDKDYGQLVSEHIFQYRPKFGGDYETLGVPEVLTKYGLTSVGQMIDLL
GLMGDSSDNIPGCPGVGEKTAQKLLAEFGSVEALLAGTDRLKGALKTKIEQNAEQIRFSK
FLATIVTDVPISFDAATCIRKEVDREHLRELYIELEFRSFLKKLNDVSAAEHTEKGAPAM
QQLSLFGNDAGQRSPIGMSPGSEEARASDLADLTTTPHAYFTADTEEQRNNLAQLLFSQP
SFAFDTETDGINPLTAHLVGMSFAVREYEAWYVPLPADMEETKRIIAPFAEALQHPAIEK
VGQNIKFDLLMLRRYGIQVAGPLFDTMIAHYLLNPELRHNMDYLAETYLRYRPIPIEHLI
GARGKGQLSMRDVPVEKVSEYAAEDADVTLRLKNLFAPQLSDGGFDVLFRDIEMPLIYVL
ADMELSGVTLDTKALKQSSEELTEALGRLEKEIHELAGTAFNINSAKQVGEILFDRLHIE
EKAKKTKIGSYSTNESILEKLRNRHPIVGKLLDYRGLKKLLSTYIDALPELINPETGKIH
TSFNQTVASTGRLSSSNPNLQNIPIREALGRDIRKAFIADQADGLFFSADYSQIELRIMA
HLSGDKHMIEAFCSGADIHSATAAKIYGVADEEVTSEMRRKAKTANFGIIYGISVFGLAE
RLNIGRAEAKELIEGYFKTYPDVRAYMDESVRLAKERGYVTTICGRKRFLPDIHSHNAVV
RGYAERNAINAPIQGSAADIIKMAMVRIFHWFEEEGLRSKMILQVHDELNFNVCHDELDR
VREIVLREMEGVMQLRVPLVADCGTGKNWLEAHG
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgaaattgcttttaatcgacgcttacgcgctcatttaccgttcttattacgctttcatc
aaaaccccccgaatgaactcgaaagggatgaacacgtcggcaaccttcggtttcatcaat
acgctcgaagatgtccttcggcgcgagaccccgacgcatatcgctttcggtttcgatccg
cccggtccgacgtttcgtcacgaggcttatgaagcctacaaagcgcagcgggaagaaacg
cctgaagatatccgcattgccatcccttacattcgcaaaatcatcgcggcataccgtatt
ccggtgttggagatgccgcattacgaggcggacgatgtcatcggtacaattgccaagcag
gccgaacaggaagggttcaaggtgttgatgatgacgtccgacaaggattacgggcagctt
gtctcggagcatatcttccagtatcgcccgaaattcggaggcgattatgaaacattagga
gtgcccgaagtgctgacgaagtacggtctgacatccgtcgggcaaatgattgatctgctc
gggctgatgggtgacagttcagataacattcccggctgtccgggtgtaggcgaaaagacc
gcgcaaaaattactcgccgagttcgggtccgtcgaggcgttactggcaggcactgaccgg
ctgaaaggtgccttgaaaacgaaaatagaacaaaatgcggaacaaatccgtttctcgaag
ttcctggccacgatcgtcactgacgttccgatctctttcgatgcagcgacctgcatacgt
aaagaggtcgacagggagcatcttcgcgaactttacatcgaactggagtttcgttctttt
ctaaagaaactgaacgatgtctctgcagcagaacacaccgagaaaggtgctcctgccatg
caacagctctccctcttcggtaacgatgcagggcaaagatcgccgataggcatgtcgccg
ggatcggaagaagcaagggcctccgatctggccgatctgacgactacgccccacgcatac
ttcacggccgatacggaggaacaacgaaacaatctggcacaactgctcttctctcaaccg
tcgttcgcattcgacacggaaacggacggtatcaatccgttgacggcacaccttgtcggg
atgtcgttcgccgtccgcgaatacgaagcatggtacgtgcctttgcctgccgatatggag
gaaacgaagcggatcatcgctccgtttgccgaggccttgcagcatcccgctatcgagaag
gtggggcaaaatatcaagttcgacctgttgatgctcaggcgttacggcatacaggtagca
ggccccctgttcgatacgatgatcgcccattacttgctcaatcccgagttgcggcacaac
atggactatctggccgagacgtatctgcgttatcgtccgattccgatcgagcacctgatc
ggcgcacgcggtaaaggacagttgtcgatgcgcgacgtaccggtggagaaggtcagcgaa
tatgctgccgaggacgccgatgtcacgctgcgcctgaagaacctcttcgctccgcaactc
tcggacggcgggttcgatgtgctgttccgcgatatcgagatgccgctgatctatgtactg
gccgatatggagctgagcggtgtcactctcgacacgaaagccttgaagcaatcgtccgag
gaacttaccgaagcgctcggtcgattggaaaaggaaatccatgaactggccggaacggcg
tttaatatcaattcggccaagcaggtcggagagattttattcgaccgcctccatattgaa
gagaaagcgaaaaagacaaagatcggcagttacagtacgaacgaaagtattctggagaaa
ctgcgtaaccgtcatccgatcgtcgggaaactccttgactaccgcggcctgaaaaagctg
ctgagcacgtatatcgacgccttgcccgagctgatcaatcccgagacgggcaaaatccat
acttcgttcaatcagacggtcgcctcgactggtcggcttagctcgtcgaacccgaacctg
caaaacatccccatccgcgaagcgctggggcgcgacattcgcaaagcttttattgccgat
caggctgacggactgttcttctcggccgattattcgcagatcgagttgcgtatcatggcc
catctgagcggtgacaagcacatgatcgaagcgttctgcagcggcgccgacattcattcg
gccactgccgcaaaaatctatggcgtagcggacgaggaggtgacctccgagatgcgtcgc
aaggccaaaacagccaacttcggcatcatctacggcatctcggtgtttggactggccgaa
cggctgaacatcgggcgcgccgaagcgaaagagctcatcgaaggctatttcaaaacgtat
cccgatgtgcgcgcctacatggacgagagcgtccgcttggctaaggaacgtggctacgtc
accacgatatgcggaaggaaacgtttcctccccgacatccattcacacaatgccgtggtg
cgcgggtacgctgaacgcaacgcgatcaatgcgccgatacagggcagcgctgccgacatc
atcaaaatggccatggtacggatttttcactggtttgaggaggaagggctacggagcaag
atgatccttcaggtacatgacgaattgaacttcaacgtgtgtcacgatgaacttgatcgt
gtacgcgaaatcgtgctgcgagagatggagggtgttatgcaactgcgtgtgccgctcgtt
gccgattgcggcaccggaaaaaactggctcgaagcacacggatag
DBGET
integrated database retrieval system
