Thiorhodovibrio frisius: Thiofri_02960
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Entry
Thiofri_02960 CDS
T09561
Symbol
gadB
Name
(GenBank) Glutamate decarboxylase beta
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
tfri
Thiorhodovibrio frisius
Pathway
tfri00250
Alanine, aspartate and glutamate metabolism
tfri00410
beta-Alanine metabolism
tfri00430
Taurine and hypotaurine metabolism
tfri00650
Butanoate metabolism
tfri01100
Metabolic pathways
tfri01110
Biosynthesis of secondary metabolites
tfri01120
Microbial metabolism in diverse environments
tfri02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
tfri00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
Thiofri_02960 (gadB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
Thiofri_02960 (gadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
Thiofri_02960 (gadB)
00430 Taurine and hypotaurine metabolism
Thiofri_02960 (gadB)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Thiofri_02960 (gadB)
Enzymes [BR:
tfri01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
Thiofri_02960 (gadB)
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Motif
Pfam:
Pyridoxal_deC
Motif
Other DBs
NCBI-ProteinID:
WPL22786
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Position
complement(3153835..3155259)
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AA seq
474 aa
AA seq
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MPKQGVSTQNDRNPMYTQTENADDETYGSSELAMGLPKSSFPDVERDPRRIYAAVRDELM
LDGNSRQNLATFCQTWEEPEIHQLMDACIDKNMVDKDEYPQTAEIEARCVQMLADLWHSP
ASDHAVGCSTTGSSEAAMLGGLAMKRRWEARRQAEGKPTDKPNLITGPVQICWHKFTRYW
DIEHREIPMDKGRLLMTPEEVLSRCDENTIGVVPTLGVTFTGEYEPVKQINDALDKLQAD
TGLDIPIHVDGASGGFLAPFCAPELEWDFRLPRVSSINASGHKFGLAPLGVGWVLWREEK
DLPESMVFWVNYLGGNMRDIALNFSRPGGQIVCQYYNFLRLGREGYSKVHGACYRSAEYL
ADEISKMGPFEIVFGGDMARGIPAVSWKLKEGTDPGFTLFDLADRLRVRGWQVPAYTLPS
NCQDQAIQRILVRNGVSQDLCTLLIEHMKAALDHIEAHPVKESLTSEDASGFHH
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgccaaagcaaggcgttagcacgcaaaacgaccggaaccctatgtacacccagacagaa
aacgccgacgacgagacttacggttcaagcgaactggccatgggcctgccgaagtcgtcc
ttccctgatgtcgagcgcgatccgcgacgcatttatgccgccgtccgcgacgaactgatg
ctcgatgggaactcgcggcaaaacctcgcgaccttctgccagacctgggaggagcccgag
atccatcagctgatggatgcctgcatcgacaagaacatggtcgataaggacgaatatccg
cagaccgccgagatcgaggcgcgctgcgtgcagatgctcgccgatctctggcattcgcct
gccagcgaccacgccgttggctgttccaccaccggctccagtgaggccgccatgctgggc
gggctggcgatgaagcgccgttgggaggcgcgtcgccaggccgagggcaaacccaccgac
aagcccaatctgatcaccgggccagtccagatctgctggcacaaattcacccgctactgg
gatatcgagcaccgcgaaatcccgatggacaagggccggctcctgatgacgcccgaagag
gtgctgagccgctgcgatgaaaacaccattggcgtggtgccgacgctgggcgtgaccttc
accggagaatacgagccggtcaagcagatcaacgacgcactcgacaagctccaggccgat
acggggctcgatattcccatccacgtcgacggcgccagcggcggttttctcgccccgttc
tgcgcacctgagcttgagtgggacttccgtctgccgcgggtgagctccatcaacgcctcg
ggccacaagttcggccttgcaccgctcggtgtgggttgggtgctgtggcgcgaagagaaa
gacctgcccgagagcatggtgttctgggtgaattatctcggtggcaacatgcgcgacatc
gcactgaacttttcgcggcctggcgggcagattgtttgccagtactacaacttcctccgc
ctcgggcgcgagggctacagcaaggtccacggtgcctgctatcgcagtgccgagtatctg
gccgacgagatatcgaagatggggccgttcgagatcgtcttcggtggtgacatggcgcgc
ggcatcccagcggtttcatggaagctcaaagagggcaccgatccgggctttaccctgttc
gatcttgccgaccggctgcgcgtgcgcggctggcaggtgccggcttatacgctaccgtca
aattgtcaggatcaagcgatccaaagaatcctggtccgcaacggcgtcagccaggacctc
tgtacactgctcatcgagcacatgaaggcagccctggatcatatcgaagcccatccggtt
aaggagtcgctcaccagcgaagatgcatcaggtttccatcattaa
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