KEGG   Thiorhodovibrio frisius: Thiofri_02960
Entry
Thiofri_02960     CDS       T09561                                 
Symbol
gadB
Name
(GenBank) Glutamate decarboxylase beta
  KO
K01580  glutamate decarboxylase [EC:4.1.1.15]
Organism
tfri  Thiorhodovibrio frisius
Pathway
tfri00250  Alanine, aspartate and glutamate metabolism
tfri00410  beta-Alanine metabolism
tfri00430  Taurine and hypotaurine metabolism
tfri00650  Butanoate metabolism
tfri01100  Metabolic pathways
tfri01110  Biosynthesis of secondary metabolites
tfri01120  Microbial metabolism in diverse environments
tfri02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:tfri00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00650 Butanoate metabolism
    Thiofri_02960 (gadB)
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    Thiofri_02960 (gadB)
  09106 Metabolism of other amino acids
   00410 beta-Alanine metabolism
    Thiofri_02960 (gadB)
   00430 Taurine and hypotaurine metabolism
    Thiofri_02960 (gadB)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Thiofri_02960 (gadB)
Enzymes [BR:tfri01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.15  glutamate decarboxylase
     Thiofri_02960 (gadB)
SSDB
Motif
Pfam: Pyridoxal_deC
Other DBs
NCBI-ProteinID: WPL22786
LinkDB
Position
complement(3153835..3155259)
AA seq 474 aa
MPKQGVSTQNDRNPMYTQTENADDETYGSSELAMGLPKSSFPDVERDPRRIYAAVRDELM
LDGNSRQNLATFCQTWEEPEIHQLMDACIDKNMVDKDEYPQTAEIEARCVQMLADLWHSP
ASDHAVGCSTTGSSEAAMLGGLAMKRRWEARRQAEGKPTDKPNLITGPVQICWHKFTRYW
DIEHREIPMDKGRLLMTPEEVLSRCDENTIGVVPTLGVTFTGEYEPVKQINDALDKLQAD
TGLDIPIHVDGASGGFLAPFCAPELEWDFRLPRVSSINASGHKFGLAPLGVGWVLWREEK
DLPESMVFWVNYLGGNMRDIALNFSRPGGQIVCQYYNFLRLGREGYSKVHGACYRSAEYL
ADEISKMGPFEIVFGGDMARGIPAVSWKLKEGTDPGFTLFDLADRLRVRGWQVPAYTLPS
NCQDQAIQRILVRNGVSQDLCTLLIEHMKAALDHIEAHPVKESLTSEDASGFHH
NT seq 1425 nt   +upstreamnt  +downstreamnt
atgccaaagcaaggcgttagcacgcaaaacgaccggaaccctatgtacacccagacagaa
aacgccgacgacgagacttacggttcaagcgaactggccatgggcctgccgaagtcgtcc
ttccctgatgtcgagcgcgatccgcgacgcatttatgccgccgtccgcgacgaactgatg
ctcgatgggaactcgcggcaaaacctcgcgaccttctgccagacctgggaggagcccgag
atccatcagctgatggatgcctgcatcgacaagaacatggtcgataaggacgaatatccg
cagaccgccgagatcgaggcgcgctgcgtgcagatgctcgccgatctctggcattcgcct
gccagcgaccacgccgttggctgttccaccaccggctccagtgaggccgccatgctgggc
gggctggcgatgaagcgccgttgggaggcgcgtcgccaggccgagggcaaacccaccgac
aagcccaatctgatcaccgggccagtccagatctgctggcacaaattcacccgctactgg
gatatcgagcaccgcgaaatcccgatggacaagggccggctcctgatgacgcccgaagag
gtgctgagccgctgcgatgaaaacaccattggcgtggtgccgacgctgggcgtgaccttc
accggagaatacgagccggtcaagcagatcaacgacgcactcgacaagctccaggccgat
acggggctcgatattcccatccacgtcgacggcgccagcggcggttttctcgccccgttc
tgcgcacctgagcttgagtgggacttccgtctgccgcgggtgagctccatcaacgcctcg
ggccacaagttcggccttgcaccgctcggtgtgggttgggtgctgtggcgcgaagagaaa
gacctgcccgagagcatggtgttctgggtgaattatctcggtggcaacatgcgcgacatc
gcactgaacttttcgcggcctggcgggcagattgtttgccagtactacaacttcctccgc
ctcgggcgcgagggctacagcaaggtccacggtgcctgctatcgcagtgccgagtatctg
gccgacgagatatcgaagatggggccgttcgagatcgtcttcggtggtgacatggcgcgc
ggcatcccagcggtttcatggaagctcaaagagggcaccgatccgggctttaccctgttc
gatcttgccgaccggctgcgcgtgcgcggctggcaggtgccggcttatacgctaccgtca
aattgtcaggatcaagcgatccaaagaatcctggtccgcaacggcgtcagccaggacctc
tgtacactgctcatcgagcacatgaaggcagccctggatcatatcgaagcccatccggtt
aaggagtcgctcaccagcgaagatgcatcaggtttccatcattaa

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