Takifugu flavidus (sansaifugu): 130516793
Help
Entry
130516793 CDS
T09160
Symbol
grin1a
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1a isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs04020
Calcium signaling pathway
tfs04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
130516793 (grin1a)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
130516793 (grin1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tfs04040
]
130516793 (grin1a)
Ion channels [BR:
tfs04040
]
Ligand-gated channels
Glutamate (ionotropic)
130516793 (grin1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
Motif
Other DBs
NCBI-GeneID:
130516793
NCBI-ProteinID:
XP_056874035
LinkDB
All DBs
Position
20:9632857..9658972
Genome browser
AA seq
945 aa
AA seq
DB search
MRLFLLAVLLSCSCARAGCEPKIVNIGAVLSQKRYEQVFKDAVNQANQVYGRDKFKLTAI
SVTHKPNAIQMALSVCEDLISSQVYAILVSHPPQSNDHLTPTPVSYTAGFYRIPVVGLTT
RMSIYSDKSIHLSFLRTVPPYSHQAHVWFDLMREFNWNHIILIVSDDHEGRAAQKRLETL
LEERETKNKKRNYENLDQLSYDNKRGPKAEKVLQFSQETNLTALLLEAKELEARVIILSA
SEEDAAAVYKAARFLNMTGSGYVWLVGEREMSGKALSEAPDGLIGLQLINGKNESAHIND
AVAVVAQSIQELFEKENITEPPRGCVGNTNIWKTGPLFKRVLMSSKYPEGLTGRVEFNDD
GDRKYAHYSILNYQKSRLIQVGIYNGTQVVMNNQRKIIWPGGETEKPQGFQMSTRLKIVT
IHQEPFVYVKPTMPDGTCKEEMTLNGVLIKKVICTGPNETIPGRPTVPQCCYGFCVDLLI
KLAMTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLGGLADMIVAPLTINNERA
QYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFS
PFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIV
ASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYR
HMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIGMRK
DSPWKQNVSLAILSSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLVAGGI
AAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQPSSSLETQDDRKSGRAEPDPK
KKASFRSISTSLASSIKRRRSSKDTQYPPTDITGQLSDPSVSTVV
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgtttctgctggcggtgctcctgtcgtgctcctgcgcgcgggccggctgcgag
ccgaagatcgtgaacatcggggccgtcctgagccagaagaggtacgagcaggtcttcaaa
gatgccgtgaaccaggccaaccaggtgtacggcagggacaaattcaagctgaccgccatc
tccgtcacgcacaagcccaacgccatccagatggctctgtccgtgtgcgaggacctcatc
tccagtcaggtctatgctatcctggtgagtcaccctccccagtccaatgaccacctcact
ccaacgcctgtctcctacacggcgggtttttaccgcatccctgtggtcggcctcaccacc
cgcatgtccatctactcagacaagagtatccatctgtccttcctgcgcacggtccccccg
tactcccaccaggcccacgtttggttcgacctgatgcgcgagtttaactggaaccacatc
atcctgatagtgagcgacgaccacgagggaagggccgcccagaagaggctggagaccctc
ctggaggagcgagagacaaagaataaaaaaaggaactatgaaaacctcgaccaactgtcc
tatgacaacaagcgaggacctaaggcagagaaagtcctccagttcagccaggagactaac
ttaactgccctgctgctggaggcaaaagagctggaggcccgagttatcatcctgtcggcc
agcgaggaagatgccgctgcagtgtacaaggctgcccgcttcctcaacatgacgggctcg
ggctacgtgtggctggtgggggagcgagagatgtcgggtaaagccctgagtgaggcgcca
gacggtctgatcggtctccaactcatcaacggcaagaatgagtcagcccacatcaatgat
gcagtggctgtcgtggctcagtccatccaggagctttttgagaaggagaacatcacggaa
ccccccaggggatgcgtgggcaacaccaacatctggaaaacagggccactctttaaacgg
gtactgatgtcttcgaagtacccagagggcctgacgggacgcgtggagttcaacgacgac
ggcgacaggaagtatgcccactacagtatcctcaactaccagaagagtcgactcattcaa
gttggaatctacaatggaacacaggtggtaatgaacaaccagaggaagatcatctggcct
ggaggagaaactgaaaaaccgcagggcttccagatgtccactcgattaaagatagtgacg
atacaccaggagccatttgtttatgtgaaacccacgatgccagatgggacatgcaaggag
gaaatgacgttaaatggagtcttaattaaaaaggttatctgcactgggcctaatgagacg
ataccaggtcggccgactgtacctcagtgttgctatggattctgtgttgatcttctaatc
aagttggccatgaccatgaacttcacctatgaggtgcacctggtggctgatgggaaattc
ggaacacaagagcgggtaaacaacagtaacaagaaagagtggaatggcatgatgggagag
ctcctgggaggcctggctgacatgattgtggctccactgacgataaacaatgaacgagct
cagtacattgaattctctaaaccctttaaatatcagggcctcaccatcctggtcaaaaag
gaaatccctcgcagtacattggactcgttcatgcagcctttccagagcacgctgtggttg
ctggtgggtctttcggtgcatgtggtggcggtgatgctttacctactagaccggttcagc
ccatttggaagatttaaagtaaacagtgaagaggaagaagaagatgccctcaccttgtca
tctgccatgtggttctcttggggagtcttgctgaactctggaattggagaaggtgcgcct
cgcagcttctcagcaagaattctgggaatggtgtgggctggattcgctatgatcattgtg
gcttcctacactgccaacctggctgccttcctggtgttggatcggcctgaggagcgcatc
accggcatcaatgacccgaggctgagaaatccatcagacaagttcatctacgccacagtg
aaacagagctctgtggacatctatttccggcggcaagtggagcttagcaccatgtaccgc
cacatggagaagcacaactatgagagtgccgccgaggctatccaggctgtgcgtgacaac
aaactgcatgctttcatctgggactctgcggtgctggagtttgaagcctcgcagaagtgc
gacctggtgaccacgggagagctgtttttccgttcgggctttggcataggcatgcgcaag
gacagcccctggaaacagaatgtgtccctggccattctcagttctcatgagaatggattc
atggaagacctagataaaacctgggtgagataccaggagtgtgactcaaggagcaatgcc
ccagccacactcacctttgaaaacatggcaggggtcttcatgctggtggctggaggcata
gcagcagggatcttcctcatctttatcgaaatcgcctataaacgccataaagacgcccgc
aggaagcagatgcagctggcctttgcggccgtcaatgtctggaggaagaacctgcagccc
tcttcctctctagagactcaggatgataggaaaagtggtagagcagagcccgaccccaaa
aagaaagcctcttttaggtccatcagtacctccctggcctccagcatcaagagacgtagg
tcctccaaagacacgcagtacccacccactgatatcacaggccaactgtctgacccatct
gtcagcactgtggtgtag
DBGET
integrated database retrieval system
