Takifugu flavidus (sansaifugu): 130522232
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Entry
130522232 CDS
T09160
Symbol
scn1laa
Name
(RefSeq) sodium channel, voltage-gated, type I-like, alpha isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tfs04040
]
130522232 (scn1laa)
Ion channels [BR:
tfs04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
130522232 (scn1laa)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
GPHH
ATP-synt_B
Na_trans_cytopl
Motif
Other DBs
NCBI-GeneID:
130522232
NCBI-ProteinID:
XP_056882329
LinkDB
All DBs
Position
1:9070686..9088878
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AA seq
1855 aa
AA seq
DB search
MAQLLVPPGPDSFRPFSRESLKAIEARITEEKARKPKGGKKKRSEENELKPSSDLEAGKS
LPLLYRDVPKSMVSIPLEDMDPYYNNQKTFIVLNKGSYIFRFNAAPALYLLSPFNLLRRI
SIRILVHSLFSVVIMCTIIANCVFMTLDRPPEWAKNVEYTFTAIYTFESLVKILARGFCL
GKFTFLRDPWNWLDFSVIVMAYVTEFVNLGNFSVLRTFRVLRAFKAISVIPGLKTIVSAL
FQSVKKLADVMILTVFCLSVFALIGLQLFMGHLKQKCVWILTNDSSVNETYANGTQVNQS
HSFNLTEYMLDPKNHYYLPGKKDPLLCGNSSDAGRCPEGYVCKRVGANPDYGYTSFDSFG
WAFLSLFRLMTQDYWENLYQQTLRASGKPYMIFFVLVIFLGSFYLINLILAVVAMAYEEQ
CQATIQEAKEKEEEFKAMLEQLKRQQEDAQAVADAAVAEGGGVDGKGGGPESSSDASKLS
SKSAKERRNRRRKKKEEEGKDEKFPQLESQDSMKKARCRFSVDANQLNYDMKFSFTHQGD
TTDTEYQGADGGTHQEFMDLLEGPEARQRAQSIASVITSTMEELEESRQKCPSCWYTFAE
TVLIWECCPVWMKFKKVVNLIVMDPFADLTITICIVLNTLFMAMEHYPMSGSFSRMLTVG
NVVFTCIFTAEMVLKIIALDPYYYFQTGWNIFDGIIVTLSLMELFLANVVGMSVLRSFRL
LRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIVVFIFAVVGMQLFGKNYRDCVCKI
SANCELPRWHMSDFFHSFLIVFRVLCGEWIETMWDCMEVSGMTMCIILYMMVMVIGNLVV
LNLFLALLLSSFSADKMLANEDDSDTNNLQIAIARIQRGIAFVKAFIQSRCRSACLRGEK
AGKAEDKSLDELHKPTGPNGVPNHTLKNFAKNGNGVDKSGDKYIVSSRSDDSIMSFINNP
SLTITVPIAVGESDFENLNTEDFSSVSSEAVCRVNVEEDDDEYSSSEGSTVDCPLGGERG
ESVDFELDKAMEPDACFFDGCVQRFQCCQVNVEAGWGKMWWTLRKTCYRIVEHSWFESFI
IFMILLSSGALACEDINSEKRKTVKILLEFADKIFTYIFILEMLLKWVAYGFAKYFTNAW
CWLDFLIVDVSLISLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALLGAI
PSIFNVLLVCLIFWLIFSIMGVNLFAGKFRMCIRRTTNQPFLPTEVKTKNDCINLGQDVA
RWTNLKVNFDNVGLGYLALLQVATFKGWTDLMYAAVDSQSKPDEQPDYEINLKMYLYFVV
FIIFGAFFTLNLFIGVIIDNFNQQKKKISGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPR
PSNKIQGYIFDFTTKQAFDIVIMVLIWLNMVTMMVETADQSEEMGRILYNINVVFIVIFT
GECLLKMISLRHYFFTNGWNIFDFIVVILSIIGVFLSELIENYFVSPTLFRVIRLARIGR
VLRLIKSAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKKESDIDDMF
NFETFGNSMLCLFQITTSGGWDKLLAPILNKHADDCDNSTEHPGSSVKGDCGNPPVGIAF
FVSYIIICFLIVVNMYIAVILENFGVATEESADPLSEDDFEMFYEVWERFDPRATQFMEY
NKLSDFADALDPPLCLPKPNKLELISMDLPMVSGERIHCLDILFAFTKRVLGEGGEMDIL
REQMEVRFMASNPSKVSYEPITTTLRRKLEDTSATVIQRAYRQYASQRSPVKSPVAVNDI
QRDRTIVDKEDGNTDAPKEISGTDESEQTPPMACNSNKHKYEKDKSEREVECKDV
NT seq
5568 nt
NT seq
+upstream
nt +downstream
nt
atggcacagctgcttgtaccaccgggtccagacagcttccgccccttcagccgcgagtcc
ctcaaagccattgaggcacgcatcactgaggagaaagccaggaaacccaaaggagggaag
aaaaaacggagcgaggagaatgagctcaaacccagcagtgacctggaggcgggcaaatca
ctcccacttctgtacagggatgttcctaaaagcatggtgtcgatacccctagaagacatg
gatccctactacaacaaccaaaaaactttcatagtattaaacaaaggcagttacatcttc
cgcttcaacgccgctcctgccttgtacctcctgagtcccttcaaccttctcagaagaata
tcaataaggattttggtgcactcattgttcagcgttgtcatcatgtgcacaatcatcgcc
aactgtgtgtttatgacgctggatcggccgcctgagtgggcaaagaatgttgagtacacc
tttactgccatctacacatttgagtccctggtcaaaattttagcccgaggcttctgtttg
gggaagttcacatttttaagggatccctggaactggctggatttcagcgtcattgtcatg
gcgtacgtgacagagtttgtcaacctgggaaacttttcagttctccgcacattcagagtg
ctgagagcctttaaggctatttcagtgatccctggtctgaaaaccatcgtcagtgctctg
ttccagtccgtgaagaagctggccgacgtgatgattctcactgttttttgcctgagcgtt
tttgctctgataggactgcaactgttcatgggtcacttaaaacaaaagtgcgtctggata
ctgacaaatgacagctcagtcaatgaaacgtacgccaatggaacacaggtcaaccagtct
cactctttcaacttgaccgagtacatgctggatccaaaaaatcattactaccttcccggc
aaaaaagatccgttgctctgtggaaacagcagcgacgctgggcggtgtccagaggggtat
gtttgcaagcgagtgggagcgaaccccgactatggctacaccagtttcgactcattcggt
tgggccttcctctctctgttcagactgatgacacaggactactgggagaacctttaccag
cagacattgcgagcctcagggaagccctacatgatcttctttgtcctagtgattttcctt
ggttccttctacctgataaacttgattctggccgtggtggccatggcctacgaggagcag
tgtcaggctaccatacaggaggccaaggagaaggaggaggagtttaaggccatgcttgag
cagctgaaacggcagcaagaggacgctcaggctgttgcagatgcggctgttgcagagggt
ggaggagtcgacgggaaaggcggagggcccgagagctcctcagacgcctctaagctcagc
tccaaaagtgccaaagagagacgcaacagacgaaggaaaaaaaaggaggaggagggcaaa
gatgagaagttccctcaattggagtcgcaggacagcatgaagaaagctcgctgccgcttc
tctgtggatgcaaaccagctcaactacgacatgaaattctccttcacacatcagggtgac
accactgacacagagtaccaaggagcagacgggggaactcaccaggagtttatggacctc
ctggagggcccggaggccaggcagagagctcaaagtatagctagtgtcataacaagcaca
atggaggagctggaagagtcaagacagaagtgcccctcatgctggtacacttttgcagaa
accgtcctcatctgggaatgttgtccagtatggatgaagttcaagaaagtggtcaacctg
attgtaatggatccatttgcggacttaactatcaccatctgcattgtactaaacacactg
tttatggccatggagcattatccaatgtctggcagcttcagcagaatgctgactgtgggc
aatgtggtgttcacctgcatcttcactgctgaaatggtgctcaagatcatcgctttggac
ccatattattactttcagacagggtggaatattttcgatggcatcattgtcaccttaagc
ctaatggaactgtttttggcaaatgtggttggcatgtctgttctcagatcattccgactg
ctcagagtcttcaagttggctaaatcgtggcccactcttaacaccctgatcaaaattatt
ggcaactcagttggggctttgggcaacctgaccctggtgctggccatcgtggtgttcatc
tttgctgtggtgggcatgcagctgtttggaaaaaactacagggactgtgtgtgcaaaatc
tccgccaactgcgagctgcccaggtggcacatgagtgacttcttccattcattcctcatt
gtgttccgagtgctttgtggagagtggatagagaccatgtgggactgtatggaggtgtct
gggatgaccatgtgcatcattctctacatgatggtcatggttatcggaaaccttgtggtg
ctgaatctcttcctggccctgctgctgagttcattcagcgctgacaaaatgttagcgaac
gaagatgacagtgacacaaacaatttgcagatagcaatcgcccgcattcaaagaggcatc
gccttcgtcaaggctttcatccaaagcaggtgcagaagtgcctgcctccgaggggagaag
gcagggaaggccgaggacaagtctctggatgagctccacaagcctacagggcccaacgga
gtccccaaccacacgctgaaaaactttgctaagaacggcaatggggtggacaaaagtgga
gacaagtacatcgtcagcagcaggagcgatgactccatcatgtccttcatcaacaacccc
agcctgaccatcacagtccccatcgctgtgggagagtccgactttgaaaacctcaacaca
gaagacttcagcagcgtctcatctgaagcggtgtgccgtgtgaatgtagaagaagacgac
gacgagtacagctcctctgagggcagcacagtggactgtcccctgggtggcgagagaggg
gagtcggtggactttgaactcgacaaagctatggaaccggacgcctgcttttttgacggc
tgcgtgcaaaggttccagtgctgccaggtaaacgtggaggcgggctgggggaaaatgtgg
tggacgctgagaaaaacctgctaccgaatagtagagcacagctggttcgagagctttatc
atcttcatgatcctgctcagcagcggagcgctggcatgtgaagatatcaacagcgagaag
aggaagacagttaaaatcttgttggagtttgcagataaaatcttcacctatattttcatt
ctggagatgctactgaagtgggtggcctatggatttgccaagtacttcacaaatgcttgg
tgctggctggacttcctcattgttgatgtgtcactgatcagtttggtagccaatgcactg
ggatattctgaactgggtgctataaaatctctgagaaccctgagagccctaaggcccctg
agagccctttcacgctttgaaggcatgagggtggttgtcaatgctctgttaggagccata
ccttctatcttcaatgtgctgctggtatgtctcatcttctggctcatcttcagcatcatg
ggagtgaatttgtttgcgggaaagttccgaatgtgtatccgcagaaccacaaatcagcct
ttccttccaacagaagtgaaaacaaagaatgattgtatcaatttaggccaagatgttgct
cgttggacaaatctaaaagttaactttgacaatgttggcctgggctatcttgcactgctg
caagtggctacatttaaggggtggacggacctcatgtacgctgctgtggactcccaaagc
aagcctgatgaacagccagactatgaaatcaacctaaagatgtacctgtattttgtggtt
ttcattatatttggagcttttttcacactcaacctctttatcggcgtcatcattgacaat
ttcaatcagcaaaagaaaaagataagtggtcaagacatcttcatgactgaagagcagaag
aaatactacaacgccatgaaaaagctagggtcaaagaagccacaaaaacccattccaaga
ccatcaaacaaaattcaagggtacatcttcgacttcaccacaaaacaagccttcgatatt
gtgataatggtcctaatatggctcaacatggtgactatgatggtggaaactgccgaccag
tccgaagaaatgggcagaattctctacaatattaatgtggtgttcattgtcatcttcacg
ggagagtgcttgttgaagatgatctcccttcgtcactactttttcacaaatgggtggaat
atatttgatttcatcgtcgtcatcctatcaatcatcggtgtgtttctctcagagttgatc
gagaattattttgtctcgccgaccctgttcagagtcatccgactggctcggatcggccgc
gtcctccgtcttatcaaaagtgccaaaggaatccgcacactcttgtttgccttgatgatg
tcacttcctgccttgttcaacatcggccttttgctcttcctggtgatgtttatctacgcc
atctttggcatgtccaacttcgcttacgtcaagaaggaatcggacatcgacgacatgttt
aactttgagacattcggcaacagcatgctctgtttgttccagatcaccacctctgggggg
tgggacaagcttctggctccaatcctcaacaaacacgcagatgactgtgacaatagcaca
gagcaccctggcagttccgttaaaggggactgtggaaatcctcctgtgggcattgccttc
ttcgtgagctacattatcatatgcttcctgattgtggtcaacatgtacattgcagttatc
ctggaaaactttggggtggccaccgaggaaagcgcagacccactgagcgaggacgacttt
gaaatgttttacgaggtctgggaaaggttcgatcctcgtgcgacgcagttcatggagtac
aataagctctcagacttcgcggacgccctggacccgcccttatgcttacccaaacccaac
aagcttgagctaatctccatggacctacccatggtgagcggggaacgcattcactgtctg
gacatcctctttgcattcacaaaacgggttctgggcgagggcggcgagatggacatcctc
agggagcagatggaggtgcgtttcatggcctccaatccttccaaagtgtcctacgagccc
ataaccaccaccctccgccgcaaactggaggacacatcagccaccgtcatccagcgggct
tacagacagtacgcaagccaacggtctcctgtcaagagccccgtagcagtgaatgatatt
caaagggacagaacaatcgttgataaggaggatggcaacacagacgcacccaaagaaatt
tccggcaccgacgaaagcgaacagacgcctccgatggcgtgtaacagcaacaaacataaa
tacgaaaaggacaaaagcgaaagggaggttgagtgtaaagatgtgtaa
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integrated database retrieval system
