Takifugu flavidus (sansaifugu): 130525676
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Entry
130525676 CDS
T09160
Symbol
grin1b
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1b isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs04020
Calcium signaling pathway
tfs04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
130525676 (grin1b)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
130525676 (grin1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tfs04040
]
130525676 (grin1b)
Ion channels [BR:
tfs04040
]
Ligand-gated channels
Glutamate (ionotropic)
130525676 (grin1b)
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
DUF6724
Motif
Other DBs
NCBI-GeneID:
130525676
NCBI-ProteinID:
XP_056888678
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All DBs
Position
5:complement(13469712..13488451)
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AA seq
905 aa
AA seq
DB search
MEVRGVLLLAILQCCSVARCGCEPRLVNIGAVLSQKRYEQVFKDAVSQANTLYGRDKFKM
NAISVTHKPNAIQMALSVCEDLISNQVYAILVSHPPQSNDHLTPTPVSYTAGFYRIPVVG
LTTRMSIYSDKSIHLSFLRTVPPYSHQAHVWFDLMREFRWNHIILIVSDDHEGRAAQKKL
ETLLEERETKTKNRNYENLDQHNFDFRRTPKAEKVLLFSQDTNLTSLLLEAKDLEARVII
LSASEDEAAGVYRAARQLNMTGSGYVWLVGEREMTGKALTEAPDGLLGLQLINGKNESAH
IADAVAVVAQSLQELFEKENITEPPRGCVGNTNIWRTGPLFKRVLMSSKYPDGLTGRIEF
NDDGDRRFATYSILNYQQKPSRLVQVGVFNGSQVVINPQRKIIWPGGELEKPVGYQMSTK
LKIVTIHQEPFVYVKPTKSDGTCKEEFTVNGVLIKKVICTGPNGTIPGQPIVPQCCYGFC
IDLLIKLAMSMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLGGLADMIVAPLTI
NNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYL
LDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGF
AMIIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVEL
STMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFG
IGMRKDSPWKQNVSLAILSSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFML
VAGGIVAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQPYPTDITGQLNLSDPS
VSTVV
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atggaagttcgtggcgtgcttcttctggccatcctgcagtgctgctcagttgctcgctgc
ggctgtgaacctcgcctggtgaacattggcgccgttctgagccagaaacgctatgagcag
gtgttcaaagatgcagtgagccaagccaacacactgtacgggagagacaaattcaagatg
aatgccatctctgttactcataaacccaatgccatccagatggcgctgtcggtctgcgag
gacctcatctccaaccaggtttacgccattctggtcagccacccccctcagtccaatgac
cacctgactcccacacccgtctcctacactgccggtttttaccggatcccagtggtcggc
ctgacgacccgtatgtccatctactctgacaagagcatccacctgtcctttctgcggacc
gtaccaccatactctcaccaggcccacgtctggtttgacctcatgagagagttccgttgg
aaccacatcatcttgattgtcagtgatgaccatgaggggcgagcggcccagaagaaactg
gagacgctgttagaagagagagagaccaagactaaaaacaggaactatgaaaacctcgac
caacacaactttgacttcaggagaacacccaaggctgagaaggttctgctcttcagccag
gacaccaacctgacatctctgctgctggaggctaaagacctggaggcccgagtcatcatc
ctctctgccagcgaggatgaggcagctggtgtctacagagctgcccgtcagctcaacatg
accggctccggttacgtctggctggttggagaaagagagatgacaggaaaagctctgact
gaagctccagatggcttgctgggtctccagttgattaatggtaaaaacgagtcggcacat
atcgcggacgctgtggcggtggtggctcagtctctacaggagctttttgagaaggagaac
atcacagaacctcctcgcggttgtgtggggaacaccaacatctggagaacaggcccgctc
ttcaaacgggtgctaatgtcatccaagtaccctgatggtttgacgggtcgtatcgagttc
aatgatgatggcgaccggcgcttcgccacctacagcatcctcaactaccagcaaaagccc
agtcgcctcgtccaggtcggagtcttcaatggatcgcaggttgtgattaatcctcagagg
aagatcatctggcctggaggagagctggagaaaccagtgggataccagatgtcaacaaaa
ctgaagatcgtcaccattcaccaggagccatttgtttatgtcaaacctacaaagtctgac
gggacatgtaaagaggagttcaccgtcaatggagtcctaatcaagaaggtcatctgcact
ggacctaatggcaccattccaggtcagcccattgtccctcagtgttgctatggtttctgc
atcgaccttctcatcaagctggcaatgagcatgaacttcacctatgaggttcacttggtg
gctgatgggaagtttggtacccaggagcgagtgaacaacagtaacaagaaggagtggaat
ggaatgatgggggagctgttgggtggtctggcagatatgattgttgctcccctcaccatc
aacaacgagcgcgctcagtacatcgagttctccaaacccttcaagtatcaggggctcacc
atccttgtcaagaaagaaatccctcgcagcactctggactcattcatgcagccgttccag
agcacgctgtggctgttggtcggtctgtcggtccacgtggtggcagtgatgctttaccta
ttagaccggttcagcccatttggaaggtttaaagtcaacagtgaagaagaagaagaagat
gccctcaccctgtcctctgccatgtggttttcatggggagtactgcttaattctgggata
ggagaaggagctcccaggagtttctcagcgaggattctgggtatggtgtgggcagggttt
gctatgatcatcgtagcttcctatactgccaacttggcagccttcctggtgttggaccga
cctgaggagcgcatcactggcatcaatgaccccaggctgcggaacccatcagataagttc
atctatgccacagtgaagcagagttcggtggatatctactttaggcgacaggtggagttg
agcaccatgtaccgccacatggagaaacacaactacgagagcgctgctgaggctatccag
gctgtccgagataacaagcttcacgccttcatctgggacagcgccgtgttggagtttgaa
gcatcacagaagtgtgatcttgtgaccacaggagagctgttcttccgctctggattcgga
attgggatgaggaaagacagtccatggaaacagaatgtttctctggccattcttagctct
catgagaacggcttcatggaggacctggacaagacatgggtccggtatcaagagtgtgac
tcgaggagcaacgcccctgctaccctgacctttgagaacatggccggtgtgttcatgctg
gttgctgggggcatcgtcgctgggatcttcctcatcttcatcgagattgcatacaaacga
cataaagatgctcgcaggaaacagatgcagctggccttcgctgctgtaaacgtgtggagg
aagaacctgcagccgtacccgaccgacatcaccgggcagctcaacctatcagatccctcc
gtcagcaccgtggtctga
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