Takifugu flavidus (sansaifugu): 130528438
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Entry
130528438 CDS
T09160
Symbol
vcam1b
Name
(RefSeq) vascular cell adhesion protein 1b
KO
K06527
vascular cell adhesion molecule 1
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
130528438 (vcam1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
tfs04090
]
130528438 (vcam1b)
04091 Lectins [BR:
tfs04091
]
130528438 (vcam1b)
CD molecules [BR:
tfs04090
]
Proteins
130528438 (vcam1b)
Lectins [BR:
tfs04091
]
I-type lectins (Siglecs)
130528438 (vcam1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
I-set
ig
V-set
ICAM1_3_5_D2
C2-set_2
Ig_C17orf99
ICAM_N
Col_cuticle_N
Motif
Other DBs
NCBI-GeneID:
130528438
NCBI-ProteinID:
XP_056893789
LinkDB
All DBs
Position
7:15728655..15735265
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AA seq
824 aa
AA seq
DB search
MQQISMFDRGVLQLISALLLMSSCCVRGLHVDVFPKRPLLKLGERQQLVCRVQDCLGVLS
VSWSFLEDRPLTATTTTNESHSVLTFDPVMIEHEGALLCRVNCGGEGRQVKTSVHVYSFP
SAPVISGGDHLTLGEESTLSCQVSGVYPAELITLTLIKGDAVLQSTTGEPGTSLVQSRYL
LQPEKGDTGAQITCRATLDLQDLLFEERIKESSVTLNVLYAPIVMVTSHSVVVTTGAPLN
LTCLAEGNPKPTISWSLRRESGRSEGRSQNGQLVLLSVSPADAGFYVCEATNTKGSQSAD
VELLVHAPPTNISLTVSPGEEVLEGQNVTFTCRSDGVPPATLVLKKEGVELERTDPASDP
ELTFSLSALMDDSAQYQCEASNQYGSQVVTRSISVRAHPLQVELSPTAPVVEQGSGLVLT
CRSSGCLQRPIWTWRWLEHSHNQEQDQEQDPKWSVLQTSHAQDGESVLHLQNMDFLDQGE
YSCEARCDNVVRYKTTHIQVLSVLPDPLLEDPGPVLLDSEAVFHCDVTNVFSVNLIRIQW
KIGNTVMKTETFKFFGFSQNISSVLYLEIKDDHRFLSCKVELLTKEGSVWSSKMAGVLLE
VHYPPRRTSLSVRPEEEVLEGQNMTFTCRSDGVPPTTLVLKKEGVELYRKGPAPELTFSL
CSALMDDSAQYQCEASNQYGSQVVTRTVSIRAPPRDTTVLILPSAVVPEGENVTICCHTI
SFPLPTMVLKKLANGIEQHSSTGTFVLVNVKARDSGLYQVNVTNSLGHQVRVFSLSVTER
STLGAVTITLVCVAAALVAAALLLSYIRRSKKKGFYQLPRSSSA
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagatctccatgtttgaccgcggagtgcttcaattaatttcagctttgctgctg
atgtcatcatgttgcgttcgtggccttcacgtggacgtgttccctaagcggcccctgctg
aagctgggcgagcggcagcaactggtgtgtcgggttcaggactgtctcggggtgctcagt
gtgtcctggtcgttcctggaggaccgccccctcaccgccactaccacgaccaatgagtcg
cactctgtgctgacctttgacccggtgatgattgaacacgaaggggcactattgtgtcgg
gtaaactgtgggggggaagggaggcaggtcaagacctcggtacatgtatactccttccca
tcagcccctgtgatcagtggaggtgaccacctgacgttgggggaggagtccacgctctcc
tgccaggtgtctggtgtgtaccctgcagagctgatcacccttaccctgattaaaggggac
gctgtcctgcaaagcactacgggagaacctggaaccagcctggtccaatccagatacctg
ctgcaaccagagaaaggtgacaccggggcccagatcacctgcagggccacgctggacctg
caggacctgctgtttgaggagaggatcaaagagagcagcgtcactctcaatgttctctat
gctcctattgtcatggtaacgtcgcactctgtggtggtgacgactggtgctcctctcaac
ctaacgtgtctggcagaaggaaacccaaagccgacgattagctggagcttaaggcgagag
tcgggtcggtccgaggggcggagccagaacggtcagctggttctcctgtcggtgagtccg
gctgatgctggattctatgtttgcgaggctacaaacacgaagggaagtcagagtgcagat
gtggagctcctggttcatgctccgcccaccaacatctccctgacggtgagcccaggtgag
gaggtgttggagggtcagaacgtgaccttcacctgccgctcagacggagttcctcccgcg
acgctggtgctgaagaaggagggggtggagctcgagaggacagatcctgcatctgaccct
gagctgaccttcagcctctccgccctgatggacgactccgcccagtaccagtgtgaagcc
tccaaccaatatgggtcccaagtggtcactcgctctatcagtgtcagagctcatcctctg
caggtcgagctttctcccacggctccagttgtagaacaaggttctggtttagttctgacc
tgtagatcttcaggatgtctgcaacgtcccatctggacctggaggtggctagaacacagc
cacaaccaggagcaagaccaggagcaagacccaaagtggtcagtactccagacgtcacat
gctcaggacggcgagtcagtgctccacctgcagaacatggacttcctggatcagggtgaa
tacagctgtgaggccaggtgtgacaacgtggtccggtacaaaaccacccacatccaggtt
ttatcggtcctgcctgatccacttctggaggatcctggtcctgtccttctggattcagag
gctgtctttcactgcgacgtcaccaatgtcttttcagttaatctgatcaggatccagtgg
aagattgggaacaccgtgatgaagaccgagacgttcaagttttttggtttctcacagaac
atctcatccgtactttacctagaaatcaaggacgatcatcggtttttgtcctgtaaagtg
gagctgctgacgaaggagggcagcgtgtggagctccaagatggctggcgtcctgctggag
gtccactatcctccacggagaacctccctgtcagtgagaccagaggaggaggtgctggag
gggcagaacatgaccttcacctgccgctcagatggagttcctcccaccaccctggtgctg
aagaaggagggggtggagctttacaggaaaggccctgcacctgagctgaccttcagcctc
tgctccgccctgatggacgactccgcccagtaccagtgtgaagcctccaaccaatatggg
tcccaagtggtcactcgcaccgtcagcatcagggctcctcccagggacaccacggtcctc
atcctaccctctgcggttgttcctgagggagagaacgtcaccatctgctgccacaccatc
agcttccctctacccaccatggtcctgaagaagctggccaacggcatagagcagcactcc
tccaccgggaccttcgtcctggtcaacgtgaaggccagggactcgggcctgtaccaggtc
aacgtgaccaacagcctgggccaccaggtgcgagtgttcagcctcagcgtgacagagagg
agcactctgggcgccgtcaccatcacgctggtgtgtgtggctgctgccttggtggccgct
gctctgctgctcagctacatcaggaggtccaagaagaaaggcttctaccagctgccccgg
tcctcttcagcctga
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