Takifugu flavidus (sansaifugu): 130531349
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Entry
130531349 CDS
T09160
Name
(RefSeq) LOW QUALITY PROTEIN: glutamate receptor ionotropic, NMDA 2C-like
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
tfs
Takifugu flavidus (sansaifugu)
Pathway
tfs04020
Calcium signaling pathway
tfs04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
130531349
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
130531349
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tfs04040
]
130531349
Ion channels [BR:
tfs04040
]
Ligand-gated channels
Glutamate (ionotropic)
130531349
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
NMDAR2_C
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
130531349
NCBI-ProteinID:
XP_056899306
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All DBs
Position
1:complement(27902682..27928788)
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AA seq
1389 aa
AA seq
DB search
MAFSRGRPSPSPWPLLFLLLLLTSSPLPLPARPLLLHPSINVAVVFSGSSYQTEVRGRLS
GENFVDLPVVVSPVTVLVNDTNPRDLLTHLCDTMATEKLHGVVFEDDVGSGAGAQVAEVA
QILDFLSTQTALPIVGISGGSAIVIPYKAEGSSFLQMGASLEQQVLSMFKIMEEYDWAEF
AVITSLLPGYDTFVDIVQTYTDTSYFLWNVQDVLSLEMSVGASEAKTKRVLQQLDAQVLL
AYCSYDEAQFLFRQAAEXGLVGPGYIWIIPSLAVGNPNSPPPDSFPVGVIGVISDQWRKS
LRQRVREGVAIVANGADGFKRQYGFIPEGHGDCSKPATHSDNNTLFRHMLNVTWERKDLS
FNSQGFLSNPSMVIIALDRERIWDKVGTYARGILQVRYPVWPRYGSFLDKVSDDRHLTVA
TLEEHPFVMVENVDPGTGTCVRNTVPCRRQANNTESMFSHPEAYTKLCCKGFCIDILKKL
SRNIKFSYDLYLVSNGKHGKMVRGTWNGMIGEVLYRRADMAIGSLTINEERSEIIDFSVP
FVETGISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVTVFVFEYFSPVGYNRS
LVSAKSPGGPRFTIGKSVWLLWGIVFNNSVPVENPKGTTSKIMVLVWAFFAVIFLASYTA
NLAAFMIQEQYIDTVSGLSDKKFQKPHEHYPPFRFGTVPNGSTERNIRSNYIDMHTHMIK
YNQKGVEEALESLKTGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALPK
SSRWKRPIDLALLQFLGDGDTERLETVWLSGICQNEKNEVMSSKLDIDNMAGVFYMLLVA
MGLSLLVFAWEHLLYWKLRHSVHKSHKLDFLLAISRGIYSCFSGVEEPGRSSGLAKPDLT
SNYAQANMLKMLRTAKDLVSTANVETSLDNATKTIEHLSRHGGTLPIRVPQMAMEAVPGG
FAYITENHCSLPQRSLTPPLAAVTSLKQHRGVSRPTPLRYTLPTHSSSCLYDRPLPVSSL
STPHLAVGETLPHQHPRHYQTTGRLYVDTHTHSSFIPCNDLQLPDIYASHPVSTALNHPN
QVGFSRRIRRSKSFQYDDDVERRKYREQGKSDDSTMCLSELKANHLQNNNISAPSFDSLY
PGDVARPHVENYSSWPPEDLMLRGRRRQRRPSFLKATWGTEESQQLDESQSSLSSQSPST
LPDLFPCILTPTTVAKAYNPSHLRNNLCLPRNQAYLHIREDQRRPNGRKGQRLRYSHSTH
LPTYGEAXRDGSGLGRGMVRRATSLFSRQYAHYLNSYPGLPFYHGPQDLQHHSQASSGQP
SPNPVCQLLACGGGRCGSQRALLYQDSVYGAYGVYQGSQTGLEAQGGQGVGGQPLGSPWR
RVSSLESEV
NT seq
4170 nt
NT seq
+upstream
nt +downstream
nt
atggcattttccaggggacgtccttctccctccccgtggcctctcctcttcctcctcctc
ctcctcacctcctccccgctcccgctgccggcccggccgctcctcctccacccgtccatc
aacgtggcggtggtgttcagcggctccagctaccagaccgaggtgcggggtcgcctcagc
ggggagaactttgtggacctgccggtggtggtcagcccggtgacggtgctggtgaatgac
accaacccccgtgacctcctgacacacctgtgtgacaccatggcaacggagaagctgcac
ggcgtggtgtttgaggacgacgtgggctcaggtgctggtgctcaggtggcggaagttgca
cagatcctggacttcctgtccactcagacggcgctgccgatcgtgggaatcagcggcggc
tctgccatcgtcatcccatacaaggccgaggggtcgtccttcctgcagatgggagcctct
ctggagcagcaggttctcagcatgttcaagatcatggaggaatacgactgggcggagttt
gcagtcatcactagcttgctgcccggctacgacaccttcgtggacatagttcagacctac
acagatacctcatatttcctgtggaatgtacaggacgtcctgtctctggaaatgtctgtc
ggggccagcgaagccaagaccaagcgcgtgctgcagcagttggacgctcaggtcctgctg
gcctactgttcctacgatgaggcgcagttcttgttccgccaggcggccgagngtggcctg
gtggggccgggctacatctggatcatccccagcctggccgtgggcaaccccaacagcccc
ccgcccgacagcttccccgttggggtgattggcgtgatcagcgaccagtggaggaagagc
ttacgccagagggtgagggagggcgtcgccatcgtggccaatggcgccgatggcttcaag
aggcagtacgggtttatccctgagggccacggcgactgcagcaaaccggccacacactcg
gacaacaacactctgttcaggcacatgctgaacgtgacctgggagaggaaagacctgtcc
ttcaacagccaaggcttcctctccaacccctccatggtcatcatcgccctggaccgggag
aggatctgggacaaggtgggtacgtatgcccgaggcatccttcaggtgcgctaccctgtc
tggcctcgatacggcagcttcctggacaaagtgtccgatgatcgtcacctgactgtggcc
acgctggaggaacatcccttcgtcatggtggagaacgtggacccggggacgggcacgtgc
gtccgcaacacggtgccgtgcaggcggcaggccaataacaccgagagcatgttcagccac
cctgaggcctacaccaaactctgctgtaagggcttctgcatagacatcctgaagaagctg
tcccgcaacatcaagttctcctacgacctctacctggtctccaacgggaaacacggcaag
atggtccgtggaacttggaatggcatgataggcgaggtgctctacagacgcgccgacatg
gccatcgggtctctcactatcaacgaggagcgttcggaaatcatcgacttctccgttcca
ttcgtggagacaggcatcagcgttatggtcgcccggagcaacgggacagtgtctccatca
gcctttctcgagccctacagcccggcggtttgggtcatgatgttcgtcatgtgcctgacg
gtggtggcggtcacggtttttgtgttcgaatacttcagtccggtcggctacaaccgcagt
ctggtcagcgccaaatctcctggcggtccacggttcaccatcggaaagtcggtgtggctg
ctgtggggcattgtcttcaacaactcggtgccggtggaaaaccctaagggaacgaccagt
aagatcatggtcctggtctgggccttcttcgctgtcatcttcttggcctcgtacaccgcc
aacctggccgccttcatgatccaagagcaatacatcgacacggtgtcgggactctccgat
aagaagttccagaaaccacatgagcattatcctccattccgcttcgggaccgtcccaaac
gggagcacggagaggaacatccgcagcaactacatcgacatgcacacacacatgataaag
tacaaccagaagggggtggaagaagctctagaaagcctgaaaaccgggaagctggacgcc
ttcatctacgatgctgctgttctcaattacatggctgggaaggacgaggggtgcaagctg
gtcaccatcggcagtgggaaagtctttgcaaccacgggatacggcatcgcgctgcccaag
agttcccgctggaaacgacctattgacctggcgctgctgcagttcctcggggacggtgac
accgagcgcctggagacggtgtggctgtcaggaatctgccagaacgagaaaaacgaagtg
atgagcagcaaactggacatcgacaacatggcgggcgtcttctacatgctgttagtggcc
atgggcctcagtctgctggtctttgcctgggaacacctgctgtactggaagctacgacac
tcggttcacaagtcccacaaactggacttcctgttggccatcagcaggggtatttacagc
tgtttcagtggagtggaggaacctgggcgttcatctggtctagccaaacccgatctgacc
tccaactatgctcaagcaaacatgttaaaaatgctccgcactgccaaggacctggtttcc
acggctaacgtcgagacgtctctggacaatgccaccaagactatagagcacctgagtcgc
cacggtgggaccctgcctatccgcgtcccacaaatggccatggaagccgtgccgggagga
tttgcttatatcaccgagaatcactgctcgcttccccagcgctccttaaccccgccttta
gcagccgttacctccctgaaacagcacagaggtgtgagcaggcccacgccgctacgttac
acactaccgactcactcttcgtcatgcctgtatgaccgtccacttccggtgtccagcctc
agcactccccatctggccgtgggtgagacgcttcctcatcaacacccgcgtcactaccag
accacaggtagactctacgttgacacccatactcattcatcttttattccttgtaacgat
ctgcagctccctgacatctacgcctctcacccagtctccaccgcattaaatcatcccaac
caagtgggtttttctcgcagaatacgtcggtccaagagctttcagtacgatgacgatgta
gagaggcgaaaatacagggaacagggaaaaagtgacgacagtaccatgtgtctgagtgag
ctcaaagccaaccacctccagaacaacaatatttcggcgcccagtttcgacagcctttac
ccaggtgacgtggcgcgtcctcatgtggagaactatagctcttggcccccggaagacctc
atgctgagagggagacgcaggcagcggcgtccctctttccttaaagcaacttggggcact
gaagaatcgcagcaacttgacgaatcccagtcttccctgtccagccagtcgccgtccacc
ttgccagacctcttcccgtgcattcttacgccaaccacagtagcaaaggcctacaaccca
tcccaccttcgaaacaacctgtgcctcccacggaaccaggcctacctccacataagggag
gaccagaggaggcccaatgggcgcaagggtcagaggctgcgctactcccactccactcac
ctccctacgtacggagaagcgntgagggatggaagcgggctggggcgtgggatggtacga
agggccaccagtttgttcagcagacagtacgctcattatttgaactcataccctggtcta
cctttttatcacgggccccaagacctgcagcaccacagccaagcctccagcggccagcca
agccccaatccagtgtgtcagctactggcttgcggtggtgggaggtgtggaagtcagcgg
gctcttctgtaccaagacagcgtgtacggggcttatggggtgtatcagggatcccagact
ggattagaggcccagggtggtcagggagtgggcggacagcctctgggaagcccctggaga
cgcgtgtccagtttggaatcagaagtctga
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