Tsuneonella flava: IDJ81_02045
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Entry
IDJ81_02045 CDS
T07616
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
tfv
Tsuneonella flava
Pathway
tfv00540
Lipopolysaccharide biosynthesis
tfv01100
Metabolic pathways
tfv01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
tfv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
IDJ81_02045 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
tfv01005
]
IDJ81_02045 (rfaD)
Enzymes [BR:
tfv01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
IDJ81_02045 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
tfv01005
]
Core region
IDJ81_02045 (rfaD)
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
Polysacc_synt_2
NAD_binding_10
Ldh_1_N
adh_short
KR
DapB_N
Motif
Other DBs
NCBI-ProteinID:
QSB44975
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Position
418928..419941
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AA seq
337 aa
AA seq
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MTVVVTGAAGFIGANIVKELNQRGCSDIVAVDDLSQPGKFANLADLRIADYFDKNDFLHR
LAAGQLGRIEAVFHEGACSDTMEHDGQFMMANNYRWSKHLLDICLRDRIRLLYASSAAVY
GASTEFAVDPANEHPLNVYGYSKLLFDNVVRRHLDADSPVQIAGFRYFNVYGPREACKGR
MASVAWHHMQQLRDEAHVRLFGAYGGYAAGEQLRDFVSVRDIVRAKLWFFDNSHAAGIFN
LGTGRAEPFNAVASAVINAERAASGQAPLTLAEQVAQGLIRYVDFPDALKGRYQCFTQAD
LSGLRAVGYDASFATVEEGVSAYARDASDAPVAEQTA
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgacagtggttgtcaccggggccgccggatttatcggcgccaatatcgtcaaagagctg
aaccagcgcggctgcagcgatatcgttgcagtggacgatctgtcccagccgggcaagttc
gccaatctggccgacctccggatcgcggattatttcgacaagaacgattttctgcaccgg
ctggccgccgggcaactgggccggatagaggcggtgtttcacgaaggtgcctgttccgat
acgatggagcacgacgggcaattcatgatggccaacaattaccgctggtcgaaacacctg
ctcgatatctgcctgcgcgatcggattcgcctgctctatgcttcgtctgcggcggtctat
ggcgcatcgacggagtttgcagtcgatccggcgaacgagcacccgctcaacgtctatggt
tattccaagctgttgttcgacaatgtcgtgcgccgccatctggatgcagacagcccggtg
cagatcgccggatttcgctatttcaatgtctacggcccacgcgaagcctgcaaagggcgc
atggcatcggttgcctggcaccatatgcagcagttgcgggacgaagcgcacgtgcgcctg
ttcggcgcatatggcggctacgcagcgggagagcagctgcgcgatttcgtttctgtgcgc
gatatcgtgcgggccaagctgtggttcttcgacaattcgcatgctgcgggtatcttcaac
ctcggcaccgggcgggcagaaccgttcaatgcggtggccagcgcggtcatcaatgccgag
cgggcggccagtgggcaggcaccgctgacgctggccgaacaggtcgcgcaggggctcatc
cgctatgtcgatttcccggacgcgctgaagggcaggtatcagtgctttacgcaagccgac
ctgtcgggcctgcgcgctgtgggatatgatgcgtccttcgcgacggtggaggaaggcgtc
agcgcctatgcccgcgatgcgagcgatgcgcctgtggcggagcaaacggcatga
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