Torulaspora globosa: HG536_0A07910
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Entry
HG536_0A07910 CDS
T06981
Name
(RefSeq) uncharacterized protein
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
tgb
Torulaspora globosa
Pathway
tgb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tgb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
HG536_0A07910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tgb03019
]
HG536_0A07910
Enzymes [BR:
tgb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
HG536_0A07910
Messenger RNA biogenesis [BR:
tgb03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
HG536_0A07910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
AAA_16
PduV-EutP
Motif
Other DBs
NCBI-GeneID:
59324073
NCBI-ProteinID:
XP_037137651
LinkDB
All DBs
Position
1:complement(1408051..1409397)
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AA seq
448 aa
AA seq
DB search
MESLPGINDLNQPSAGAGGDDEFHRLSIKQGSEWNIEVSPETKLTIKVISGIAEIFGTEL
AIGKEYNFRNYKFGVYAVEDVELEWRCPELTGETLSISPNSTAKSVYNLHFALEKMRSSS
FDGPRVMIVGETSSGRTALSRTLCSYGIKFKSYQPMYVNLDPQQAIFSPPGCLTATPISD
ILDVQCSTWGQSMTSGATPLHSKQPVVKNFGLERLSENKRLYLDVVEQLATSVNGRLMND
SLVRRSGLVIDIPAISDLDEDYNDLEYFTKQFKVNVVVLVGISDSQKVDAIAKKLGSLVG
SRMVNLPRISGSVKPEDAFKRSLQRGAIREYFYGTPDTVLSPYAVGVGFEDVTVYRPKNV
FEDTQDAQEAATHLLPVAVNPSNLQHALVAISYADRKATPEVIQKAPILGFGLITEVNDK
RNKLRILLPVPGALPNKSMILTSYRYLE
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggagagtttacctgggatcaatgatctgaatcagccttcggctggcgctggaggagat
gatgagttccataggctgtcaattaagcaaggttctgaatggaatatagaggtttcgccg
gagacgaagttaactattaaagtgatttccggaatagctgagatttttggtactgaattg
gccattggcaaggaatacaacttccgaaactacaaatttggtgtttatgcggtagaagac
gtcgagttggaatggagatgtccagaattaaccggcgaaacattatcaatatcgcccaac
tctacagcgaaatctgtctataatctgcattttgcattggagaagatgagaagctcaagc
tttgatggacctagggttatgatagttggagaaacaagttcgggcagaacagctctttct
aggacgctctgttcttatggaataaagttcaagtcgtaccagccaatgtacgtgaatctt
gacccacagcaggctatcttctctcctcctggttgtctgactgctacccccatatcggat
attctagacgtccaatgcagcacttggggtcagagtatgactagtggtgcaaccccattg
cacagtaaacagcctgtggtgaaaaatttcggattggaaaggttatcagaaaacaagcga
ctgtatctcgacgtggtcgagcagttggccaccagcgttaatgggagattgatgaatgac
tctctcgtgcggaggtccggattagtgatagatataccggcaatatcggacctagatgag
gattataatgatctcgagtatttcacaaaacagttcaaggtcaacgttgtagtgcttgtc
ggaatatctgacagccaaaaggtagacgcaattgccaagaaacttggatccttagtcggc
agtcgtatggtgaatcttccaaggatatctggctctgttaaacctgaagacgctttcaag
agatcactgcaacgaggtgccatacgagagtatttctatggaacgccagatacggtattg
agtccttacgccgttggtgtgggatttgaagatgttaccgtctatagaccaaaaaacgtc
tttgaagacactcaagatgcccaggaggctgcaactcatcttttgcctgtagcagtgaac
ccaagcaatctgcagcacgcgcttgtggccatctcctatgcagatagaaaggcaacgccc
gaggtgatacagaaagcacctattttaggctttgggctcatcactgaagtcaacgacaag
agaaacaagctgcgaattctgctgccggtacctggtgcacttcccaacaaatccatgatt
ttgacctcgtatcgatacctggagtag
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