Torulaspora globosa: HG536_0F04190
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Entry
HG536_0F04190 CDS
T06981
Name
(RefSeq) uncharacterized protein
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
tgb
Torulaspora globosa
Pathway
tgb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tgb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HG536_0F04190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tgb03021
]
HG536_0F04190
Enzymes [BR:
tgb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HG536_0F04190
Transcription machinery [BR:
tgb03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
HG536_0F04190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
59327308
NCBI-ProteinID:
XP_037140767
LinkDB
All DBs
Position
6:801934..806943
Genome browser
AA seq
1669 aa
AA seq
DB search
MDISKPVGSEITSIDFNVLTTRDIRDLSVKQITNPTVLDNLGHPISGGLYDLALGAFLRN
LCSTCGLDEKFCPGHQGHIELPVPCYNPLFFNQLYIYLRSCCLFCHHFRLKSVEVHRYAC
KLKLLQYGLIDESYRLDQISIAGMQYLLDDDEQEDQEAVEDNAMDAGTNSSKTKGTKDIS
AALKAEIMTKRNQFVDEKIGLALSEGRTSERGTFTATTNDERKRLIHDFHKRVLSRAKCD
NCGMFSPKFRKDGFTKIFETALTDKQLTNNRVKGMIRQDMIKKQQQSKRLGGSEEENNSV
EEDFSVERNPSARPKTGSTYILSTEVRNILRALFKKEQQVLQYIFHSRPNLSRKVIKADN
FFMEVVLVPPTRFRLPSKLGEEVHENTQNQLLSKILTTSLLIRDLNDEMSEIQKDKVSAD
DRRVIFSRLMNAFVTIQNDVNAFIDSTKAQGNSSSKVAIPGVKQALEKKEGLFRKHMMGK
RVNYAARSVISPDPNIETNEIGVPPVFATKLTYPEPVTAYNIAELRQAVINGPDKWPGAT
QIQNEDGTLVSLVGMTLEQRKALANQLLTPSSNILTHPLNKKVYRHIKDRDIVLMNRQPT
LHKASMMGHKVRVLPGEKTLRLHYANTGAYNADFDGDEMNMHFPQNENARAEAFNLANTD
SQYLTPTSGSPVRGLIQDHISAGVWLTSKDSFFTREQYQQYIYGCIRPEDGHATRPRVVT
LPPAIMKPVPLWTGKQIISTVLLNVTPPDMPGINLRSKNKIKNEYWGKDSTENDVIFKNG
NLVCGILDKSQYGASKYGIVHSLHEVYGPEVAAKVLSVLGRLFTNYITATAFTCGMDDLR
LTAEGNKARTEILKTSIDVGRQAAAEVTNLDKDTAPDDTELLKRLEEILRDENKSGILDA
VTSSKVNAVTSKVVSTCVPDGTMKKFPYNSMQAMALSGAKGSNVNVSQIMCLLGQQALEG
RRVPVMVSGKTLPSFKPFETDAMAGGYIKGRFFSGIKPQEYYFHCMAGREGLIDTAVKTS
RSGYLQRCLTKQLEGVHISYDNSVRDGDGTLIQMLYGGDAIDVTKESHMTQFDFCLDNYD
ALLKKYNPSALVEHLDVDNALKYSKKAVKHRKKHAKEPHYKQKVKYDPVLAKYNPAKYLG
SVSEKFQDKLEAYLDSNAKALKSHGNVNEKKFRALMQLKYMRSLINPGEAVGIIASQSVG
EPSTQMTLNTFHFAGHGAANVTLGIPRMREIIMTASAAIKTPQMTLPIWNDVSDEQADTF
CKSISKVLLSEVVDKVTVVETTGSTNGSVASRSYAIKMMFFNQEEYNEQYDISSEELQNV
ISNKFLSLLEAAILKEIKKQKKTTLPEVGIAVAKESAMAALDGSMEKPTQDNDEEDARKK
GKQAVSYEEPDEEELETMRQAEKSSDEEDLDSDKESKDSDSEDESDVDMERAIESAEEAA
EDMSKTQRDRQHAIISKQRFVTKYNFDDKNGKWCEFRLELAADTEKLLMVNIVEDICRRS
VIREVPCIDRCVHSESVKGRRTLVTEGVNFQAMWDQEAFIDVDAITSNDVAAVLRTYGVE
AARNTIVNEINNVFSRYAISVSFRHLDLIADMMTRQGTYLAFNRQGMETSTSSLMKMSYE
TTCQFLTKAVLDNEREQLESPSARIVLGKLSNVGTGSFDVLTRVPNNGR
NT seq
5010 nt
NT seq
+upstream
nt +downstream
nt
atggatatctcaaaacccgttggatccgaaatcacttcgatcgatttcaacgtccttacg
actcgggatatccgcgatttgtccgtgaaacaaatcaccaacccaacggttttggacaac
ctgggacatccgatctccggtggtttgtatgacttggctctaggtgcatttttgcgaaat
ctttgttcgacatgtggtctagatgagaaattttgtcctggccatcagggccacatagaa
ttgccagtgccttgttacaatccactgtttttcaatcaattgtatatttacctgagatcg
tgctgtttgttctgccatcattttaggttgaaaagcgtagaagtacaccgctatgcttgc
aaattgaagcttttgcagtacggtcttatcgatgaatcgtaccggttagatcaaatttcc
attgctggaatgcagtatcttctcgatgatgatgagcaggaagatcaggaagcggtagag
gacaacgcaatggatgccggcactaactcctcgaaaactaaaggaacaaaagatatttcc
gctgctttgaaggcggagatcatgactaagcgtaaccaattcgtcgacgaaaagattggc
ttggctctaagcgaaggaagaacttctgagagaggtactttcaccgctacgaccaacgat
gagaggaaaagactgattcatgatttccataagagggttctaagtagggctaaatgtgac
aactgtggaatgttttcaccaaagttccggaaggatggatttaccaagatctttgagacg
gcactaacggataagcaattgacaaacaaccgtgtgaaaggtatgattcgccaggacatg
atcaagaagcaacagcagtcgaagagattaggtggctctgaagaggaaaataactctgtt
gaggaggactttagcgtggagaggaatccctcggccagaccaaagactggctctacatac
attctatctactgaggtcagaaacatactgagggctttgttcaagaaggaacaacaagtt
cttcagtatattttccattcaagacccaacttgagcaggaaggtgataaaagcagacaac
ttcttcatggaagttgtgctggttccgcctacaagattccgtcttccatcgaagctgggc
gaagaagtgcacgaaaacacccagaatcagctactatcgaagatattgaccacctcattg
ctcatcagagatttgaacgatgaaatgtccgagattcaaaaagataaagtatctgcagac
gacaggagagtaatcttcagcagattaatgaacgcttttgtcaccattcagaacgacgtt
aatgccttcatcgattcgacaaaggcccaaggtaattctagctccaaggttgccattcct
ggtgtcaagcaagctttggagaaaaaagaaggtcttttcagaaaacatatgatgggtaaa
cgtgtcaactatgctgctcgttcagttatttcaccagatcccaatattgaaactaatgaa
attggtgttccccccgtttttgcgacgaaattaacttatcctgaaccggttacagcttac
aacatcgccgaacttcgtcaagcggttatcaacggtccagacaagtggccgggtgctacg
cagattcaaaatgaagacggcactctcgtttctctggttggtatgaccctggaacagcgt
aaagccttggcaaaccaactattgaccccatcttctaatatcctgactcatccattgaac
aagaaagtgtaccgtcacatcaaagatagagatattgttctgatgaatcgccaacctact
ctgcataaagcctctatgatgggtcataaagttagagttctgccaggtgagaaaactttg
agactgcattatgccaacactggtgcttataacgccgattttgatggtgatgaaatgaat
atgcatttcccacaaaatgaaaatgctagagctgaagcgttcaatttggccaatactgac
tcgcagtacctgactccaacttcgggctctcctgttagaggtttaattcaagatcacatc
tctgctggtgtttggctaactagcaaggacagttttttcacaagagagcaataccaacaa
tacatatacggttgtattcgtccagaggatggccatgctacaaggccaagagttgttaca
ttgcctcctgctattatgaaacccgtgccgctatggactggtaagcagattatttcaaca
gttctactgaatgtcactccgcctgatatgccaggtattaacttgagatcaaagaacaag
atcaagaatgaatactggggcaaagactcaacagagaatgacgtaatctttaaaaacggt
aatttggtttgtggtatacttgataaatctcagtatggtgcttccaagtacggtattgtg
cactcgcttcatgaggtttatgggccagaagttgcagctaaagttctttcagttcttgga
agactcttcaccaactacatcacagctacagctttcacttgtggtatggatgatttgcgt
ctgaccgcggaaggtaacaaagcaagaactgaaatattgaagacctccattgatgtaggt
cgtcaagcagccgcagaagtcactaacttggataaagatacggctccggatgatacagag
ttattgaaacgtttggaagagattttgcgtgacgaaaacaaatcaggtattctggatgcc
gttacttcctctaaagtgaatgccgtcacttccaaagttgtttcgacatgtgttcccgat
ggtacaatgaaaaaattcccttataactccatgcaagctatggctttatccggtgctaag
ggttccaatgtcaatgtttctcaaattatgtgtctgcttggccaacaagctttggaaggt
agaagagtgcccgtgatggtcagtggtaagactttaccctctttcaagccattcgaaaca
gatgccatggctggtggttacattaaaggtcgtttcttctcaggtattaagcctcaagag
tactactttcattgcatggcaggccgtgaaggtttgatcgatacagcagtcaagacctct
agatctggttatttacagcgttgtttgaccaaacaattggaaggtgtccatatatcgtac
gataatagcgttagggatggtgatggaactttgatccaaatgctgtatggtggtgatgct
atagacgttacgaaagagtcccatatgactcaattcgatttttgcttggacaactatgat
gctcttctcaagaaatacaatccttctgccttagtcgaacatctggacgtagataacgct
ctgaagtactccaaaaaggctgttaagcacagaaagaagcacgccaaagaacctcattat
aagcagaaagtcaaatatgaccctgttttggccaaatacaatcccgctaagtacttgggt
tctgtttctgagaaattccaggataaactagaagcatatttggattccaacgctaaggca
ttaaaatctcatggaaacgtgaatgagaagaaattcagagctttaatgcagctcaaatat
atgcgttccttgattaatcccggtgaagcggtcggtatcatagcctcgcaatcagtcggt
gaaccatcaactcaaatgaccttgaacactttccatttcgctggtcatggtgctgctaat
gtgactttgggtattcctcgtatgagagagattatcatgacggcatctgctgcaataaag
accccacaaatgacgctacccatctggaatgatgtttcggatgaacaagctgacaccttc
tgtaaatcgatttcgaaggttctgctgtcagaagtggtagataaggttacagttgtggaa
acaaccggctcgacaaatggtagtgttgcgtctcgttcgtatgcgatcaaaatgatgttc
ttcaatcaggaagaatacaacgagcaatacgatatttcgagcgaagaattgcagaatgta
atatccaataagttcctatcgttacttgaagctgcaatcctgaaagagatcaaaaaacaa
aagaaaacgacccttcctgaagtcggcattgctgtcgcaaaagagtctgctatggcagct
ttagatggttcaatggagaagccaactcaagacaacgatgaagaagatgctcggaagaag
ggcaaacaagcggtttcctatgaggagccagatgaggaagagttagagacgatgagacaa
gcagaaaagtcctcggatgaagaagatctggattctgataaggagagcaaggactcagat
tctgaagatgaatctgatgtggatatggaaagggcaatcgagtcggctgaggaagctgct
gaagatatgagcaagactcaacgcgatcgtcagcatgccatcatttcgaaacaaagattt
gtcacaaaatataactttgatgacaaaaacggtaagtggtgtgaattcagactagagtta
gcagctgataccgaaaagctactgatggtaaatatcgtagaagatatctgcaggaggtct
gtcatcagagaagttccttgcattgatcgttgtgtgcattcagagtcagtgaagggtaga
agaaccctggttaccgaaggtgttaactttcaggctatgtgggaccaagaggcctttatt
gacgttgatgccataacgtctaacgacgttgcagcagtattaaggacgtacggtgtagaa
gctgccagaaacactattgtgaatgagattaacaacgtcttctcccgttacgcaatttca
gtttcgttccgccatttggatcttatcgcagacatgatgactaggcaaggtacatatctt
gctttcaacagacaaggaatggagacgtcgacatcgtctttgatgaagatgtcttacgaa
acgacttgtcagttcctaaccaaagccgtgctcgacaatgagcgcgagcagttggaaagt
ccttcagctagaatcgtcctaggaaagctaagcaatgttggtacggggtctttcgatgta
ttaacaagagtcccaaataacggtcgctga
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integrated database retrieval system