Theropithecus gelada (gelada): 112637009
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Entry
112637009 CDS
T08041
Symbol
MSH6
Name
(RefSeq) DNA mismatch repair protein Msh6 isoform X1
KO
K08737
DNA mismatch repair protein MSH6
Organism
tge
Theropithecus gelada (gelada)
Pathway
tge01524
Platinum drug resistance
tge03430
Mismatch repair
tge05200
Pathways in cancer
tge05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
tge00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
112637009 (MSH6)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
112637009 (MSH6)
09162 Cancer: specific types
05210 Colorectal cancer
112637009 (MSH6)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
112637009 (MSH6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tge03400
]
112637009 (MSH6)
DNA repair and recombination proteins [BR:
tge03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
112637009 (MSH6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
HORMA
MUM1-like_PWWP
UPF0524
Motif
Other DBs
NCBI-GeneID:
112637009
NCBI-ProteinID:
XP_025261660
Ensembl:
ENSTGEG00000002779
LinkDB
All DBs
Position
13:68305370..68330886
Genome browser
AA seq
1391 aa
AA seq
DB search
MSRQSTLYSFFPKSPALSDANKASARASREGGRAAAVPGASPSLGEDAAWSEAGPGPRPS
ARSASPPKAKNLNGGLRRSAAPAAPTSCDFSPGDLVWAKMEGYPWWPCLVYNHPFDGTFI
REKGKSVRVHVQFFDDSPTRGWVSKRLLKPYTGSKSKEAQKGGHFYSAKPEILRAMQRAD
EALNKDKIKRLELAVCDEPSEPEEEEEMEVGTTYVTDKSEEDNEIESEEEVQPKTQGSRR
SSRQIKKRRVISDSESDIGGSDVEFKPDTKEEGSSDEISSGVGDSESEGPNSPVKVARKR
KRVVTGNGSLKRKSSRKEMPSATKRATGISSETKNTLSAFSAPQNSESQAHVSGGGDDSS
RPTVWYHETLEWLKEEKRRDEHRRRPDHPDFNASTLYVPEDFLNSCTPGMRKWWQIKSQN
FDLVICYKVGKFYELYHMDALIGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKV
ARVEQTETPEMMEARCRKMAHISKYDRVVRREICRIITKGTQTYSVLEGDPSENYSKYLL
SLKEKEEDSSGHTRAYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGN
LSKETKTILKSSLSSSLQEGLIPGSQFWDASKTLRTLLEEGYFREKLSDDIGVLLPQVLK
GMTSESDSIGLTPGEKSELALSALGGCIFYLKKCLIDQELLSMANFEEYIPLDSDIVSTT
RSGAIFTKAYQRMVLDAVTLNNLEIFLNGTNGSTEGTLLERVDTCHTPFGKRLLKQWLCA
PLCSPYAINDRLDAIEDLMVVPDKISEVVELLKKLPDLERLLSKIHNVGSPLKSQNHPDS
RAIMYEETTYSKKKIIDFLSALEGFKVMCKIIGIMEEVIDGFKSKILKQVISLQTKNPEG
RFPDLTTELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLEKQRN
RIGCRTIVYWGIGRNRYQLEIPENFTTRNLPEEYELKSTKKGCKRYWTKTIEKKLANLIN
AEERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAVLDVLLCLANYSRGGDGPMCRPVIL
LPEDTPPFLELKGSRHPCITKTFFGDDFIPNDILIGCEEEEQENGKAYCVLVTGPNMGGK
STLMRQAGLLAVMAQMGCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETASI
LMHATAHSLVLVDELGRGTATFDGTAIANAVVKELAETIKCRTLFSTHYHSLVEDYSQNV
AVRLGHMVCANSFFPQIRFFERALLLLAHVSLIFFFLKACMVENECEDPSQETITFLYKF
IKGACPKSYGFNAARLANLPEEVIQKGHRKAREFEKMNQSLRLFREVCLASERSTVDAEA
VHKLLTLIKEL
NT seq
4176 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgacagagcaccttgtacagcttcttccccaagtctccggcgctgagtgatgcc
aacaaggcctcggccagggcctctcgcgaaggcggccgtgccgccgctgtccccggggcc
tctccttccctaggcgaggatgcggcctggagcgaggctgggcctgggcccaggccctcg
gcgcgctccgcgtcgccgcctaaggcgaagaacctcaacggagggctgcggagatccgca
gcgcctgcggcccccaccagttgtgacttctcaccaggagatttggtttgggccaagatg
gagggttacccctggtggccttgtctggtttacaaccacccctttgatggaacattcatc
cgcgagaaagggaaatcagtccgtgttcatgtacagttttttgatgacagcccaacaagg
ggctgggttagcaaaagacttttaaagccatatacaggttcaaaatcaaaggaagcccag
aagggaggtcatttttacagtgcaaagcctgaaatactgagagcaatgcaacgtgcagat
gaagccttaaataaagacaagattaagaggcttgaattggcagtttgtgatgagccctca
gagccagaagaggaagaagagatggaggtaggcacaacttatgtaacagataagagtgaa
gaagataatgaaattgagagtgaagaggaagtacagcctaagacacaaggatctaggcga
agtagccgccaaataaaaaaacgaagggtcatatcagactctgagagtgacattggtggc
tctgatgtggaatttaagccagatactaaggaggaaggaagcagtgatgaaataagcagt
ggagtgggggatagtgagagtgaaggcccaaacagtcctgtcaaagttgctcgaaagcgg
aagagagtggtcactggaaatggctctcttaaaaggaaaagttctaggaaggaaatgccc
tcagccaccaaacgagcaactggcatttcatcagaaaccaagaatactttgagtgctttc
tctgcccctcaaaattctgaatcccaagcccatgttagtggaggtggtgatgacagtagt
cgccctactgtttggtatcatgaaactttagaatggcttaaggaggaaaagagaagggat
gagcacaggaggcggcctgatcaccccgattttaatgcatctacactctatgtgcctgag
gatttcctcaattcctgtactcctgggatgaggaagtggtggcagattaagtctcagaac
tttgatcttgtcatctgttataaggtggggaaattttatgaactgtaccacatggatgct
cttattggagtcagtgaactggggctggtattcatgaaaggcaactgggcccattctggc
tttcctgaaattgcatttggccgttattcagactccttggtgcagaagggctataaagta
gcacgagtggaacagactgagactccggaaatgatggaggcacgatgccgaaagatggca
catatatccaagtatgatagagtggtgaggagggagatctgtaggatcattaccaagggt
acacagacttacagtgtgctggaaggtgatccctctgagaactacagtaagtatcttctt
agcctcaaagaaaaagaggaagattcttctggccatactcgtgcatatggtgtgtgcttt
gttgatacttcactgggaaagtttttcataggtcagttttcagatgatcgccattgttcg
agatttaggactctagtggcacactatcccccagtacaagtcttatttgaaaaaggaaat
ctctcaaaggaaacgaaaacaattttaaagagttcattgtcctcttctcttcaggaaggt
ctgatacctggctcccagttttgggatgcatccaaaactttgagaactctccttgaggaa
ggatattttcgggaaaagctaagtgatgacattggggtgttgttaccccaggtgcttaaa
ggtatgacttcagagtcagattccattgggttgacaccaggagagaaaagtgaattggcc
ctctctgctctaggtggttgtatcttctacctcaaaaaatgccttattgatcaggagctt
ttatcaatggctaattttgaagaatatattcccttggattctgacatagtcagcactaca
agatctggtgctatcttcaccaaagcctatcaacgaatggtgctagatgcagtgacatta
aacaacttggagatttttctgaatggaacaaacggttctactgaaggaaccctgctagag
agggttgatacttgccatactcccttcggtaagcggctcctaaagcaatggctttgtgcc
ccactctgtagcccttatgctatcaatgatcgtctagatgccatagaagacctcatggtt
gtgcctgacaaaatctccgaagttgtagagcttctaaagaagcttccagatcttgagaga
ctactcagtaaaattcataatgttgggtctccccttaagagtcagaaccatccagatagc
agggctataatgtatgaagaaactacatacagcaaaaaaaagatcattgattttctttct
gctctggaaggattcaaagtaatgtgtaaaattatagggatcatggaagaagtcattgat
ggttttaagtctaaaatccttaagcaggtcatctctctgcagacaaaaaatcctgaaggc
cgttttcctgatttgactacagaactgaaccgatgggatacagcctttgaccatgaaaag
gctcgaaagactggacttattactcccaaagcaggctttgactctgattatgaccaagct
cttgctgacataagagaaaatgaacagagcctcctggaatacctagagaaacagcgcaac
agaattggctgtaggaccatagtctattgggggattggtaggaaccgttaccagttggaa
attcctgagaatttcaccactcgcaatttgccagaagaatatgaattgaaatctaccaag
aagggctgtaaacgatactggaccaaaactattgagaagaagttggctaatctcataaat
gctgaagaacggagagatgtatcattgaaggactgcatgcggcgactgttctataacttt
gataaaaattacaaggactggcagtctgctgtagagtgtatcgcagtgttggatgtctta
ctgtgcctggctaactacagtcgagggggtgatggtcctatgtgtcgcccagtaattctg
ttgccagaagataccccccccttcttagagcttaaaggatcacgccatccttgcattacg
aagactttttttggagatgattttattcctaatgacattctaataggctgtgaggaagag
gagcaggaaaatggcaaagcctattgtgtgcttgttactggaccaaatatggggggcaag
tctacactcatgagacaggctggcttattagctgtaatggcccagatgggttgttacgtc
cccgctgaagtatgcaggctcacaccaattgatagagtgtttactagacttggtgcctca
gatagaataatgtcaggtgaaagtacattttttgttgaattaagtgaaactgccagcata
cttatgcatgcaacagcacattctctggtgcttgtggatgaattaggaagaggtactgca
acatttgatgggacagcaatagcaaatgcagttgttaaagaacttgctgagactataaaa
tgtcgtacattattttcaactcactaccattcattagtagaagattattctcaaaatgtt
gctgtgcgcttaggacatatggtatgtgcaaatagtttttttccacaaattcggtttttt
gagagggcccttctgttgctagcacacgtatcgctaatatttttctttcttaaggcatgc
atggtagaaaatgaatgtgaagaccccagccaggagactattaccttcctctataaattc
attaagggagcttgtcctaaaagctatggctttaatgcagcaaggcttgctaatctccca
gaggaagttattcaaaagggacatagaaaagcaagagaatttgagaagatgaatcagtct
ctacgattatttcgggaagtttgcctggctagtgaaaggtcaactgtagatgctgaagct
gtccataaattgctgactttgattaaggaattatag
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integrated database retrieval system
