Toxoplasma gondii: TGME49_294700
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Entry
TGME49_294700 CDS
T01093
Name
(RefSeq) polynucleotide 5'-hydroxyl-kinase
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
tgo
Toxoplasma gondii
Pathway
tgo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tgo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
TGME49_294700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tgo03019
]
TGME49_294700
Enzymes [BR:
tgo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
TGME49_294700
Messenger RNA biogenesis [BR:
tgo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
TGME49_294700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
AAA_16
nSTAND3
ATP_bind_1
Motif
Other DBs
NCBI-GeneID:
7900258
NCBI-ProteinID:
XP_018638576
UniProt:
A0A125YM10
LinkDB
All DBs
Position
Ia:complement(join(1072951..1073103,1073644..1073804,1074728..1074899,1075690..1076464,1076845..1076954,1077543..1077647,1078358..1078570,1078866..1079243))
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AA seq
688 aa
AA seq
DB search
MHASSGLGGPSTSAASRRVSGASRAREDRPFAASSSEAPGERRGKNERNLSRQQPRGCTQ
RASSLAAFAAMASANPADRRPGTAAVRLCTLSPMTELRLVLEDPQEGDLLGNQPNRNPDA
QTTVIKVLRTDGPGGSRGRSPRSREEEEAPRGSLRGTAEIFGAELLPEVDYPLLPGSCLA
VFSWGGCTLQLRGRVQQEYTAPNGSMKDYLALSSILDARRQIAALRRAVGPRVLVVGSSC
SGKSSICSVLANYAIRSGWSPMYVELDPRGSADKPQVQLPPGCLGATVLDSLNFLEEPEF
PLVYFYGRTEPPAAQAACVAGSAAPRVTHAPGAAFPDFDGFLEPADAAASSAPATHAADL
FEWYCECLSANVYAAFAQNLQEKHCVVKAEEEKEGDVRRLLAASGMLINAPPLANLALVS
RLLEIFNVDLVLVVDNPSLLRALQDVCSFEEPANENIALSRLLSRRPRAQTHAEGQAPAG
TDAQVEAKTAEGGEGKPDEEDDEEDFSFAPNPRVEVIGLKKMEGAVTVDNARLRQLRRSR
VLSYFLGLEGGTRLRPQTLRLRLSEYSLVQLEVVKLAPLSALPADYVRSQKQSPIAVSPW
TGNPLSLANALLGVPATRDPALVKFSNVACLLHVFKVEEMPSALGENEGAPTYVMDVHSP
ALPGGQLPSNFLIVPGDLKGMKFFLDLN
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgcatgcgtctagcggcctgggagggccttcgacttctgcggcctcgcgccgagtgtct
ggagcgtctcgcgcgcgggaggaccgcccttttgcggcttcttcgagcgaggcccctggc
gaaaggagaggaaaaaacgagcgaaatctctctcgccagcagccgagaggctgcacccag
agagcttcttcgctcgcggcctttgccgcgatggcgtctgcgaatcccgccgacagacgc
ccaggcactgcagctgtccggctctgcactctcagcccgatgacggagctcagactggtt
cttgaggatcctcaggaaggcgacttgcttggaaatcagccgaacagaaatccagatgcc
cagacgactgttatcaaagtgcttcggacggacggccctggggggtctcgcgggaggagt
ccacgcagccgagaagaagaagaggctcctcgagggtcgctgcgagggacagcagaaatc
ttcggcgccgaacttcttccagaagtcgactatccgctcttgcctggcagctgtctcgct
gtcttctcctggggtggatgtacactccagctgcggggccgcgttcaacaggagtacacg
gcgccgaacggatcgatgaaggactaccttgcgctgtcgtccatcctcgacgcccgcaga
cagatcgctgccctccggcgcgcagttgggcctcgcgtcctcgtcgtcgggagcagctgc
agcggaaaaagttcgatttgctcggttctggcgaactacgcgatccgctcgggatggtct
ccgatgtacgtcgaactcgatccgagaggcagcgcggacaagccgcaggtgcagttgccg
cccgggtgtctgggggcgacggttttggactcgctgaattttctggaggagcctgagttt
cctctcgtctacttctacgggagaacagagccgccggctgcacaagctgcatgcgtcgcc
ggatccgcggcgcctcgcgttacgcatgcgccgggcgctgcgtttccggactttgacgga
tttctcgagccggcggacgccgcggcttcctcggcgccggcgacgcatgcagcagatctt
ttcgagtggtactgcgagtgtttgagcgcgaacgtctacgcggccttcgcccagaacctc
caagagaagcattgcgttgtcaaggccgaagaagagaaggaaggcgatgtgcgtcgtctc
ctcgctgcctcggggatgctgatcaacgcgccgcctctagcgaacctcgcgctggtgtcg
cgtcttttggaaatcttcaacgtcgacctcgtgctggtcgtcgacaatccgagtctgctt
cgcgctctccaggacgtctgttcgttcgaggagcctgcgaatgaaaacatcgccttgagt
cgccttctctcgcgaagacccagagcgcaaacgcatgcagagggccaggcgccggccgga
acggacgcgcaggtggaggcgaagacggcggagggaggcgaaggaaaacctgacgaggaa
gacgacgaagaggacttttctttcgcgccaaatccacgagtcgaagtcatcggcctgaaa
aaaatggaaggcgctgtcacggtcgacaacgcgcgtctccggcaactgcgtcgttcgcgc
gtcctcagctactttcttgggctcgaaggaggcacccgtctcagacctcaaactcttcgt
ctgcgtctctcagagtacagcctcgttcaactcgaagtcgtgaagctggcgccgctctcg
gcgctccccgcagattacgtgaggtcccagaaacagtctccaatcgctgtttcgccgtgg
acaggaaatccactttcgctggcgaacgcgctcctcggtgtgcctgcaactcgcgacccg
gcgctcgtgaaattttccaatgtcgcttgtcttctgcatgtcttcaaagtcgaggaaatg
ccgtcggcgctcggcgagaacgaaggcgcgccgacctacgtgatggacgttcactcgccg
gctcttcctggaggccagctaccgtctaacttcctcatcgttccgggtgacttaaaggga
atgaagttctttttggacttgaactga
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