Tinamus guttatus (white-throated tinamou): 104574485
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Entry
104574485 CDS
T08560
Symbol
NOTCH1
Name
(RefSeq) LOW QUALITY PROTEIN: neurogenic locus notch homolog protein 1
KO
K02599
Notch 1
Organism
tgt
Tinamus guttatus (white-throated tinamou)
Pathway
tgt04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
tgt00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
104574485 (NOTCH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF
hEGF
Ank_2
Ank
EGF_CA
Notch
NOD
NODP
EGF_2
Ank_5
Ank_3
Ank_4
EGF_3
Motif
Other DBs
NCBI-GeneID:
104574485
NCBI-ProteinID:
XP_010220047
LinkDB
All DBs
Position
Unknown
AA seq
2348 aa
AA seq
DB search
MSPEHHRNALAEEKGAASPARNRKRFWSPSIPGPSRSGAPGAGANAELLFAGLRCTQLAE
SCLNGGKCETFLNGTEVCQCPSAHVGERCQLPNPCASSPCKNAGTCTAVVRGGTVDYTCA
CRVGFSDELCLTPRENACLSSPCRNGGPCDLEGLLQPXXVCDPCSAPPRSAGKTCQQADP
CASNPCANGGQCVPFEAHYVCRCTAGFHGANCKQDVNECNLSPAVCKNGGRFFXFYQCSC
KPAYTGQNCEHLYVPCNPSPCQNGGTCRQTGDTTYDCTCLPEWNNYPGMAILVLASECER
SWERPSPRSLGQRRKAPGGWKRTRGTHGISPGYPCEPAGRKEPVKTSPSAAGLGFAVRLG
QGDDLAGGGTCGDAVNTYNCQCPPEWTGQYCTEDVDECQLMPNACQNGGTCHNNHGGYNC
VCVNGWTGEDCSENIDDCAMAACFQGATCHDRVASFYCECPHGRTGLLCHLDDACISNPC
NEGSNCDTNPVNGKAICTCPSGYMGPACNQDVDECSLGANPCEHAGKCINTQGSFQCQCL
QGYSGPRCEIDVNECLSNPCQNDATCLDQIGEFQCICMPGYEGVYCEINTDECASSPCLH
NGVCVDKINEFHCECPTGTNNAYHCLCLKGTTGPNCEINLDDCASNPCDYGKCIDRINGY
ECTCEPGYAGRMCNVNIDECSSNPCHNGGTCKDGINGFTCLCPEGFHDPKCLSEVNECNS
NPCIHGRCHDGLNGYRCDCDPGWSGPNCDINNDECESNPCMNGGTCKDMTSGYICTCREG
FSGPNCQTNINECASNPCLNQGTCIDDVAGYKCNCLLPYTGATCEDVLAPCANGPCKNGG
ECRESEDYESFSCICPSGWQGQTCEIDINECVKSPCRNGATCQNTNGSYRCLCKAGFTGR
NCDTDIDDCKPNPCHNGGSCSDGVGTFFCECLAGFRGPKCEEDINECASNPCKNGANCTD
CVNSYTCTCPSGFSGIHCENNTPDCTESSCFNGGTCVDGINTFTCMCPPGFTGSYCEHDI
NECDSKPCLNGGTCQDSYGTYKCTCPQGYTGLNCQNLVRWCDSSPCKNGGKCWQTNNLYR
CECNSGWTGLYCDVPSVSCEVAAKQQGVDVAHLCRNSGLCVDTGNTHFCRCQAGYTGSYC
EEQVDECSPNPCQNGATCTDYLGGYSCECVAGYHGVNCSEEINECLSHPCQNGGTCIDLI
NTYKCSCPRGTQGVHCEINVDDCSPFFDPVTLGPKCFNNGKCTDRVGGYSCICPPGFVGE
RCEGDVNECLSNPCDARGTQNCVQRVNDYKCECRPGYTGRRCDTVVDGCKGKPCRNGGTC
AVASNTGRGFICKCPLGFVGATCENDSRTCGNLHCLNGGTCISIHKSSKCMCAPAFTGPE
CQYPASSPCNSNPCYNGGTCEFFSDASPYYRCNCPANFNGLNCHILDFDFQGGIGQDIIP
PKIEEKCEIAVCAGYAGNKICDGKCNNHACGWDGGDCSLNFNDPWKNCSQSLQCWKYFND
GKCDSQCNNAGCLYDGFDCQKYEGQCNPLYDQYCKDHFSDGHCDQGCNNFECEWDGLDCA
NNMPEKLADGTLVVVVLITPENLKNNSFNFLRELSRVLHTNVVFKKNPKGEYMIFPYYGN
EEELKKHYIKRSTEDWSDMSSAVINKVKSSLYSRAGRRQKRELDQMDIRGSIVYLEIDNR
QCIQSSSQCFQSATDVAAFLGALASLGNLNIPYKIEAVKSETAEPTRSSQLYPMYVALAA
LVLLAFISVGVLVSRKRRREHGQLWFPEGFKVTESSKKKRREPLGEDSVGLKPLKNASDG
TLMDDNQNEWGDEETLDTKKFRFEEQAMLPDTDDQTDHRQWTQQHLDAADLRISSMAPTP
PQGEIDADCMDVNVRGPDGFTPLMIASCSGGGLETGNSEEEDDAPAVISDFIYQGASLHN
QTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIR
NRATDLDARMHDGTTPLILAARLAVEGMLEDLINCHADVNAVDDLGKSALHWAAAVNNVE
AAVVLLKNGANKDMQNNKEETPLFLAAREGSYETAKILLDHFANRDITDHMDRLPRDIAQ
ERMHHDIVRLLDEYNLVRSPPLHAGPLGAPTLSPPLCSPNSYIGNLKPAGQGKKARKPST
KGLSCNGKDSKDLKARRKKSQDGKGCLLDNSSVLSPVDSLESPHGYLSDVASPPLMTSPF
QQSPSMPLNHLPGMPDAHMSINHLNMAGKQEMAMGMLPTSLPSSLAQPMTTTQFLTPPSQ
HSYSSPLDNTPSHQLQVPDHPFLTPSPESPDQWSSSSPHSNVSDWSEGISSPPTSMQSQM
GHIPEAFK
NT seq
7047 nt
NT seq
+upstream
nt +downstream
nt
atgtcacccgagcatcaccgcaacgcgctcgcggaggagaagggagcagcgagcccggct
agaaatcggaagcgattctggtccccgtcgatcccggggccgtcccgctccggggccccc
ggagccggggctaacgctgagctcctctttgcaggtttgcggtgcacgcagcttgccgag
tcctgcctcaacggcggcaagtgcgaaactttcctcaacgggacggaggtgtgccagtgt
cccagcgcccacgtgggcgagcggtgccagctgcccaacccgtgcgccagctccccgtgc
aagaacgcgggcacgtgcacggccgtggtgcgcggcggcaccgtggactacacgtgcgcc
tgccgcgtgggcttctccgacgagctctgcctgacgccccgcgagaacgcctgcctcagc
agcccctgccgcaacggcgggccctgtgatctcgaaggtcttttgcaaccataatgagtc
tgtgatccttgctctgctcctcctcgctccgcaggtaaaacgtgccagcaggccgacccg
tgcgcctccaacccctgcgccaacggcgggcagtgcgtgcccttcgaggcccactacgtg
tgccgctgcacggccggcttccacggcgccaactgcaagcaggacgtcaacgagtgcaac
ctctcgcccgccgtgtgcaagaacggcggcaggttttttnttttctaccagtgctcctgc
aagccggcctacaccgggcagaactgcgagcacctctacgtgccctgcaacccgtcgccc
tgccagaacgggggcacctgccgccagaccggtgacaccacctacgactgcacgtgtctg
ccagagtggaataattatccaggaatggctattttggtgttggcttccgagtgcgagcgg
agttgggagagaccctcgccgcgctcgctggggcagcgcaggaaggcgcccggcggctgg
aagcgcacgcggggaacgcacggaatatccccgggatatccctgcgagccggccgggaga
aaagagcctgtgaaaacatccccttctgccgcggggctggggtttgcagtgcggttgggg
cagggggatgacctggccggtgggggcacgtgtggggacgccgtcaacacctacaactgc
cagtgcccacccgagtggacaggccagtactgcaccgaggacgtggatgagtgccagctc
atgcccaacgcctgccagaacgggggcacctgccacaacaaccatggcggctacaactgc
gtctgcgtcaacggctggacgggcgaggactgcagcgagaacatcgatgactgcgccatg
gccgcctgcttccagggggccacctgccacgaccgggtggcctccttctactgcgagtgc
ccccacggccgcacaggtttgctgtgccacctcgacgacgcctgcatcagcaacccctgc
aacgagggctccaactgcgacaccaaccccgtcaacggcaaggccatctgcacctgccct
tcgggctacatggggccggcctgcaaccaggacgtggacgagtgctcgctgggagccaac
ccttgcgagcacgcggggaaatgcatcaatacgcaggggtccttccagtgccagtgcctg
cagggctactcggggccccgctgcgagatagatgtcaacgagtgcctctccaacccctgc
cagaacgatgccacctgcctggaccaaatcggggagttccagtgcatctgcatgcccggc
tacgagggcgtctactgcgagatcaacacggacgagtgcgccagcagcccctgcctgcac
aacggcgtctgcgtcgacaagatcaacgagttccactgcgagtgccccacaggtacgaac
aacgcctaccactgcctctgcctcaagggcaccaccgggcccaactgcgaaatcaacctg
gacgactgcgccagcaacccctgcgactacggcaagtgcatcgaccggatcaacggctac
gagtgcacctgcgagccgggctacgcagggcggatgtgcaacgtcaacatcgacgagtgc
tccagcaacccttgccacaacgggggcacgtgcaaggatggcatcaacggcttcacctgc
ctctgccctgagggcttccatgaccccaagtgcctgtcggaagtgaacgagtgcaacagc
aacccctgcatccacgggcgatgccacgacggcctcaacggctacaggtgtgattgcgac
ccaggatggagtgggcccaactgtgacattaacaacgatgagtgtgaatccaatccctgc
atgaatggtggcacctgcaaggacatgaccagcggctacatctgtacctgcagggaaggg
ttcagcggacccaactgccagaccaatatcaacgaatgcgcttccaacccgtgcctgaac
caggggacatgcattgacgacgtcgctggctacaagtgcaactgcctcctgccctacaca
ggagccacgtgtgaggatgtgctggccccttgtgccaatggcccctgcaagaacggcggc
gaatgccgggagtcggaggactacgagagcttctcctgcatttgcccatccggctggcaa
ggtcagacgtgtgagatcgacatcaacgagtgcgtgaagagcccctgccgtaacggcgcc
acgtgccagaacaccaacgggagctaccgctgcctgtgcaaggcaggcttcaccggccgc
aactgcgacaccgacatcgatgactgcaagccaaatccgtgccacaacggtggctcctgc
tccgatggagttggcaccttcttctgtgagtgcctggctggtttccgtgggcccaagtgt
gaggaggacatcaacgagtgtgccagcaatccctgcaagaacggtgccaactgcaccgac
tgtgtcaacagctacacttgcacttgcccctctggcttcagcgggatccactgtgagaac
aacacacccgactgcacggagagctcctgcttcaacggagggacctgcgtggatggcatc
aacaccttcacctgcatgtgcccacctggcttcacgggcagctactgcgagcacgacatc
aacgagtgcgactcaaagccctgcctgaacgggggcacttgtcaggacagctacgggaca
tacaagtgcacttgtccccaaggctacaccggcctcaactgccagaacctggtgcgctgg
tgtgactcctctccctgcaaaaatgggggcaagtgctggcagaccaacaacctgtaccgc
tgcgagtgcaacagcgggtggacggggctctactgcgacgtgcccagtgtctcctgcgag
gtggctgccaagcagcaaggggtcgacgtcgcccatctctgcaggaactcggggctctgc
gtggacaccggcaacactcacttctgccgctgccaagccggctacaccggcagctactgc
gaggagcaggtggacgagtgctcccctaacccctgccaaaacggagccacctgcacagac
tacctgggcggctattcctgcgagtgtgtggctggttatcatggagttaactgctcagaa
gagatcaatgaatgcttgtcccacccgtgccagaacggaggaacctgcatcgatctcatc
aatacctacaaatgctcctgccctagaggaactcaaggggtgcactgtgagatcaatgtg
gatgactgcagccctttctttgatcctgtcaccctggggcccaagtgctttaacaatggc
aagtgcacggatcgggtaggtggctacagctgcatctgcccccctggctttgtaggggag
cgctgcgagggagacgtcaacgagtgcctgtccaacccctgtgacgcgcgcggcacccag
aactgcgtgcagcgggtcaatgactacaaatgcgagtgccggccgggctacacaggacgc
cgctgcgacacggtggtggatggctgtaagggcaaaccgtgccggaacggcggcacttgt
gctgttgccagcaataccggccgtggcttcatctgtaaatgccccctgggttttgttggt
gccacttgcgagaatgactcccgcacgtgcgggaacttgcactgcctgaacggaggcacc
tgcatctccatccacaagagctccaagtgcatgtgtgcaccggccttcacgggccccgag
tgccagtacccggccagcagcccctgcaactccaacccctgctacaacgggggcacctgc
gagttcttcagcgacgcttccccctactaccgctgcaactgccctgccaacttcaacggc
ctcaactgccacatccttgacttcgatttccaaggtggcatcgggcaggatatcatcccg
cccaaaatcgaggagaagtgcgagatcgcggtttgcgcagggtacgcgggcaacaagatc
tgcgacgggaaatgcaacaaccacgcgtgtggctgggacggaggggactgctccctcaat
ttcaacgacccctggaagaactgctcccagtccctgcagtgctggaagtacttcaacgac
ggcaagtgcgactcgcagtgcaacaacgctggctgcctctacgatggcttcgactgccag
aagtacgaagggcagtgcaaccctctgtacgatcagtactgtaaagaccacttctccgat
ggtcactgtgaccagggctgcaataattttgagtgtgaatgggatggtctggactgtgca
aacaatatgccggagaagctggcggatggcaccctggtcgtggtggtgctgatcactccg
gagaacctgaagaacaattccttcaattttctgcgggagctgagccgcgtgctgcacacc
aacgtggtcttcaagaagaaccccaagggggagtatatgatctttccatactatggcaat
gaggaagagctgaaaaaacattacataaagaggtccacggaggactggtcagatatgtct
agtgctgtcatcaacaaagtgaagagcagcctctactccagagctggcaggaggcagaag
agagagctggatcagatggacatcagaggatccatcgtttacttggaaattgataaccgc
caatgcatccagtcctcttcccagtgcttccagagtgcgaccgatgtggcagctttcctg
ggtgccttggcctccctcggcaacctgaacatcccctataaaatagaagctgttaaaagt
gagaccgcggagcccacgaggagctcgcagctgtatcctatgtacgtggcgctggcggcg
ctggtcctgctggccttcatcagcgtcggggtgctggtgtcccgcaagcgccgcagggag
catgggcagctctggttccccgaaggcttcaaagtgaccgagtcgagcaagaagaagcgg
cgagaaccgctcggggaggattctgttggactcaaacccctcaaaaatgcttcagatggc
acattgatggatgacaaccaaaatgaatggggtgatgaggagaccttggacaccaagaag
ttcaggtttgaggagcaggcgatgctccccgacacggatgatcagacagatcacaggcag
tggactcagcagcacctggacgccgccgaccttcgcatatcctctatggcacctactcca
ccgcagggcgaaatcgatgcagactgcatggatgtcaacgtcaggggtcccgatggcttc
accccgctcatgatcgcctcgtgcagcggcggagggctggagacgggcaacagcgaagag
gaggacgatgcccccgcggtcatctccgacttcatctaccagggcgccagcctgcacaac
cagacggaccgcacgggcgagacggcgctgcacctggccgcccgctactcccgctccgac
gcggccaagcgcctgctggaggccagcgccgacgccaacatccaggacaacatgggcagg
acgcccctgcacgcggcggtctctgccgatgcccagggagtcttccagatcctgattaga
aacagagcaaccgatctggacgcccgaatgcacgatggcaccacccccctcatcctggct
gctcgcttggccgtggagggcatgctggaggacctcatcaactgccacgcggatgtcaac
gccgtggacgatctcggcaagtcagccctgcactgggcagctgctgtgaataacgttgaa
gctgccgtggtcctcctgaagaatggtgccaataaggatatgcagaacaataaggaggag
accccgctgttcctcgcagccagagaggggagttacgaaacggccaaaatcctcctggac
cactttgcaaaccgcgacatcacggaccacatggaccggctgccgcgggacatcgcccag
gagcgcatgcaccacgacatcgtgcgcctgctggacgagtacaacctggtgcggagcccg
ccgctgcacgccggcccgctgggcgcccccacgctgtccccgccgctctgctcgcccaac
agctacatcggcaacctcaaacccgccggccagggcaagaaggccaggaagccgagcacc
aagggcctgagctgcaacggcaaggattccaaagacctcaaagcccgcaggaaaaagtcc
caggatggaaaaggatgcctgctcgacaactccagcgtgttgtcgccggtagactccctg
gagtcgccccacgggtacctgtcggatgttgcctctcctccgctgatgacctccccgttt
cagcagtccccttccatgcctctgaatcacctgccgggcatgccggatgcccacatgagc
atcaaccacctcaacatggccgggaagcaggagatggccatgggcatgctgcccacgtcg
ctgccgtcctcgctggcgcagcccatgaccacgacgcagttcctgacgcccccctcgcag
cacagctattcctcccccttggacaacactcccagccaccagctccaggtgcccgaccac
cctttcctcacgccgtcgccggagtcgcccgaccagtggtcgagctcctcgcctcattcc
aacgtgtccgactggtccgagggcatctccagccctcccacgagtatgcagtcacagatg
ggccacatccccgaagccttcaagtga
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integrated database retrieval system
