Taeniopygia guttata (zebra finch): 100218605
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Entry
100218605 CDS
T01082
Symbol
PDX1
Name
(RefSeq) LOW QUALITY PROTEIN: pancreas/duodenum homeobox protein 1
KO
K07594
insulin promoter factor 1
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tgu03000
]
100218605 (PDX1)
Transcription factors [BR:
tgu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
100218605 (PDX1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
100218605
NCBI-ProteinID:
XP_030130699
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Position
1:complement(66249116..66255209)
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AA seq
305 aa
AA seq
DB search
MGRRREPGRAVGPGGAASCQRGIPGSASGSCLMSLSCEAPLAPLAMNTEEQYYASAQLYK
ESCAFQRAQAQDYNPSPPACLYMGRQQQTPYSSALGALEQGSPPDISPYEVPPITEDAGV
SHLHHHHHHPHLPPPHQDALPFSDGADTGAIEEPRVQVPFAWMKSTKSHAWKGQWTGGSY
MVEPEENKRTRTAYTRAQLLELEKEFLFNKYISRPRRVELAVMLNLTERHIKIWFQNRRM
KWKKEEDKKRGAGNSNDPEQDCVVSSGELQTKEDLQPCPAGNLPSGASRDLLAPSLAPRR
QQDSR
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggggaggcggcgggagccgggcagggcggtggggcccggcggggccgccagctgtcaa
agaggcatcccgggctccgccagcgggagctgccttatgtccctaagctgcgaagccccc
ttggccccgctcgccatgaacaccgaggagcagtattacgcctcggcgcagctctacaag
gagtcgtgtgcgtttcagagagcccaagcgcaggactacaaccccagcccccccgcctgc
ctttacatgggcaggcagcaacagactccttattccagcgccttaggggctctcgagcaa
ggcagccctccagacatttcaccttacgaggtgccccccatcactgaggatgccggggtc
tcccaccttcatcaccatcaccaccaccctcatcttcctcctccccaccaggacgcgctg
cctttctcagacggggcggacacgggggctatagaggagccccgagtgcaggtgcctttc
gcctggatgaagtccaccaaatcgcacgcctggaagggacagtggaccggtggatcctac
atggtggaaccggaggagaacaagcggacgaggacggcgtacacgcgggcgcagctgctg
gaactggagaaggagtttctcttcaacaagtacatctccaggccacggcgggtggagctg
gctgtcatgttgaacttgaccgagaggcacatcaagatctggttccagaacaggcggatg
aagtggaagaaagaagaagacaaaaagcgaggggcgggcaacagcaatgaccccgagcaa
gactgcgttgtgtcctccggggagctgcagaccaaggaggatctccagccgtgccccgcc
gggaaccttccctcgggagcctccagggaccttctcgcccccagcctggcccccagaagg
cagcaggactctcggtga
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