Taeniopygia guttata (zebra finch): 100219317
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Entry
100219317 CDS
T01082
Symbol
CDKAL1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase isoform X1
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tgu03016
]
100219317 (CDKAL1)
Enzymes [BR:
tgu01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
100219317 (CDKAL1)
Transfer RNA biogenesis [BR:
tgu03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
100219317 (CDKAL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
Motif
Other DBs
NCBI-GeneID:
100219317
NCBI-ProteinID:
XP_002191115
Ensembl:
ENSTGUG00000006350
LinkDB
All DBs
Position
2:69059506..69436374
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AA seq
582 aa
AA seq
DB search
MPAACESVLEDIEDIVSAEDLKPHDRQFVRRNVFPKVRKRNSQKNIQTDDEPPSDSIIPG
VQKIWIRTWGCSHNNSDGEYMAGQLAAYGYTITDNSAEADLWLLNSCTVKNPAEDHFRNS
IKKAQEGKKKVVLAGCVPQAQPRQEYLKGLSIIGVQQIDRVVEVVEETIKGHSVRLLGQK
KDNGKRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGDLASYPIEELVDRA
KQSFQEGVCEIWLTSEDTGAYGRDIGTDLPKLLWKLVEVIPEGAMLRLGMTNPPYILEHL
EEMAKILNHPRVYAFLHIPVQSASDSVLMDMKREYCVADFKQVVDFLKEKVPGITIATDI
ICGFPGETDEDFQETMKLVELYRFPSLFINQFYPRPGTPAAKMPQVPAAVKKQRTKDLSQ
LFHSYSPYDHKVGERQRVLVTEESFDSNYYVAHNPFYEQVLVPKDPLLMGKMVEVDIYEA
GKHFMKGQPVSDARVHTASISRPLAKGEVSGLTEEFRCSVQNGTNWRAQPSAEIPVKTRL
SSWMALQLPWQQEGGGVKILSVSLALLAVLVMFYYGGMKTEL
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctgcctgtgagtcagtgcttgaggatatcgaagatatcgtgtcagcagaagat
ttgaagccacacgatcgacagtttgtgagaaggaatgtttttcccaaagtgcgaaaacgg
aactcccagaaaaacattcagacagatgatgagcccccaagtgacagcattattcctggt
gttcagaaaatctggattcgtacatggggatgttctcacaataattcggatggtgaatac
atggctggacagctggctgcatatggatacacaattacagacaactctgctgaagcagat
ttatggttgctgaacagttgtacagtaaaaaatcctgctgaggaccacttcagaaactca
atcaagaaagcccaagaagggaagaagaaagttgttctagcaggttgtgtaccacaagcc
caacctcgccaggaatacctgaaaggcttgagtattataggggttcagcagatagatcgt
gtagtagaagttgtggaggaaactattaaaggtcattctgtgaggctgctgggtcagaaa
aaggataatggaaaacgtttggggggagcacgactggatttgccaaagattaggaagaat
ccacttatagaaataatttccatcaatacagggtgtctcaatgcatgtacctattgtaaa
acaaagcatgccagaggagatctagcaagttatcctattgaagaactggtggacagagcc
aagcagtcttttcaagagggtgtttgtgagatatggctgaccagcgaagacacaggggct
tatggcagagacattggcacagaccttcccaagcttctgtggaagctagttgaagttatt
cctgagggagctatgctgaggcttggcatgacaaaccctccctatattttagagcatctg
gaggaaatggccaagattctcaatcatccaagagtatatgcttttctgcacataccagtc
cagtcagcctctgacagtgtgctcatggacatgaaaagagaatactgtgtggcagacttc
aaacaagtagtggatttccttaaagaaaaagtgcctggaataacaattgctacagacatc
atctgtggttttccaggagagacagatgaagattttcaagaaacaatgaaacttgtagaa
ctgtacaggtttccaagcttgtttattaatcaattctacccacgtccaggaaccccagct
gcaaaaatgcctcaagttccagctgcagtgaaaaaacagagaacaaaggatctgtcccag
ctgtttcattcatacagtccatatgatcataaggttggtgagaggcagagagttctggta
acagaagaatcctttgactccaattactatgttgctcacaatcctttctatgagcaggtt
cttgtgccaaaggatcctctgttaatgggtaagatggtagaagtggatatttatgaagct
gggaaacattttatgaaggggcagccagtatcagatgccagagttcatactgcatccatc
agcagacctctagcaaaaggagaagtttctggtttaacagaggagttcagatgttcagtg
cagaacggcacaaactggagagcacagccttctgctgagatcccagtgaaaacacggctc
agctcctggatggctttgcagctgccatggcaacaagagggaggtggagtgaagatcctg
tctgtcagcctggctctgctggcagttcttgttatgttttactatggaggaatgaaaaca
gaactgtga
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