Taeniopygia guttata (zebra finch): 100219340
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Entry
100219340 CDS
T01082
Symbol
RET
Name
(RefSeq) proto-oncogene tyrosine-protein kinase receptor Ret
KO
K05126
proto-oncogene tyrosine-protein kinase Ret [EC:
2.7.10.1
]
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu04010
MAPK signaling pathway
tgu04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
100219340 (RET)
04020 Calcium signaling pathway
100219340 (RET)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
tgu01001
]
100219340 (RET)
Enzymes [BR:
tgu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
100219340 (RET)
Protein kinases [BR:
tgu01001
]
Receptor tyrosine kinases (RTK)
RET family
100219340 (RET)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
RET_CLD1
RET_CLD3
Pkinase
RET_CLD4
Cadherin
RIO1
Pkinase_fungal
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
100219340
NCBI-ProteinID:
XP_030131746
Ensembl:
ENSTGUG00000006250
LinkDB
All DBs
Position
6:complement(10570285..10650394)
Genome browser
AA seq
1104 aa
AA seq
DB search
MRSAARTAGLLLLCGVALGLYFPRKEYLENVYIDEPAGMPLLRIHALRDSHEEVAHFHLC
QHLIVPRARPQENNWFQIREKTGLLYLSKSLDREDFNMLSVGSWMPLSKVMLYVSVSHPF
QEKDCDSATRTTVFLSLINATAPTCSSLTARQLCFTEMDLSFHIKENKPPGTFHQLQLPS
VHHLCQNLSISYKLLAAEGVPFRYNENTTSVRVTQRLDREERERYELIAKCTVREGFREM
QVEVPFLVNVLDEDDSPPFLPNGTDTADAVVEFNRKEGAVLSTLTVYDADTTPIYPLESS
RKKYTGTIITDDPWISETFRVEHIFDEIHFSPNGSQVRGTRHEYKLVLNKSISVTEHRSF
QLDVLVNDTEFHGPERSVMLHFNVSILPVSIQFSNITYQFTVNRNAERFAQVGKICIENC
MKFRGVNITYRLLSPNSSCFPVSILQSREDKFGTLYVNDSSVLLRPECKEIQYTVQATDK
QSRKHTKTLLTVVLEGTLLNKEEDCPDSCAVSKHRAECEECGGLGVLTGRCQWRQGSGKG
ITTNYSTCTPSIRTCPDGICDVVESRDPAVCPQDCTSGNIIGGHGKGIGNLGIKSGHGIC
YCFPRQNCYCEKDDIKEQLCDDLCKTVITGAVVLCFVISVLVSFYCIHRYHKNAPKPPIA
SAEMTFRRPVQPYPISYSSSNVRRPSLDSMENQVSVDTFKIPEDPKWEFPRKNLVLGKTL
GEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASQSELRDLLSEFNLLKQVNHPHVIKL
YGACSQDGPLYLIVEYAKYGSLRSFLRESRKVGPSYVGSDGNRNSSYLDNPDERALTMGD
LISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSK
GRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLFNLLKTGYRM
ERPENCSEEMYSLMLRCWKQEADKRPTFTEISKELEKMMVKSRDYLDLAASTPSDSLLYD
DGLSEEETPLVDCNNAPLPRTLPSTWIENKLYGMSYPNWPEESPVPLTRFDGTNSVFSRY
ANDSVYANWMVSHSAAKFMDKFDS
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atgcgctcggcggcgcggacagccgggctcctcctgctctgcggggtggccttgggtctc
tacttccccaggaaggagtacttggagaatgtctacattgacgagccagcgggaatgccg
ctcctgcgcatccacgccttgagggattcacatgaggaagtggcccactttcatctgtgc
cagcatctcatagttcctcgagcaagaccacaagaaaataattggttccaaatcagagaa
aaaacaggacttctctacctcagcaaaagtctggatagagaggacttcaacatgctgtct
gtaggaagttggatgccgttatccaaggtgatgctgtatgtatctgtatcccaccctttc
caagagaaggattgtgactccgctacacgcaccacggttttcctctctttgatcaatgcc
actgcaccaacttgcagttccctgacagcaaggcagctttgcttcacagaaatggatctc
tcctttcacatcaaggagaataaaccacctggtacatttcatcagctccagttaccctca
gttcatcatctgtgtcagaatctcagcatttcctacaagttgcttgcagctgaaggagtt
ccctttcggtacaacgagaacaccaccagcgtgcgggtgacgcagcgcctggatcgggag
gagagggagagatacgagctcattgccaagtgcaccgtcagagagggattcagggaaatg
caggttgaggtgcctttcctggtgaacgtgttggatgaagatgactctcctcccttcctt
cccaatggcactgatacagcagatgctgttgtggaattcaacaggaaagagggcgctgtt
ctttccacgctgactgtgtacgatgcagacaccacacccatttatccccttgaaagcagc
agaaagaaatacacaggaaccatcattactgacgatccctggataagtgaaacatttcgt
gtagagcacatctttgatgaaatccacttcagcccaaatggcagccaagtgaggggaact
cggcatgagtacaaactggtactgaataaaagcatttcagtcacagagcatcgttccttc
cagctggatgttttggtgaatgacacagaatttcatggcccagaaagatcggtgatgctt
cacttcaatgtctccatcctccctgtcagcattcagttttcaaacataacttaccagttc
acagtgaacagaaatgctgaacgttttgcacaagtaggaaagatctgcattgaaaactgc
atgaaattccgtggtgtaaacatcacctacaggttgctgtcccccaactcgagctgcttt
cctgtcagcattctgcaaagccgagaggacaaatttgggaccctctatgtgaatgattcc
tctgtgctgctcagacctgaatgcaaggaaatacaatacactgttcaagctacagacaag
cagagcaggaaacacaccaaaaccctcctcactgttgtcctggaagggactcttttaaac
aaagaagaggactgccctgactcttgtgctgtaagcaagcaccgtgctgaatgtgaagag
tgtggtggcctgggagtgctaacaggaagatgccagtggagacaggggagtgggaaaggg
atcaccacaaactactccacatgcaccccgagcatcaggacttgtccggatggcatctgt
gacgtggtggagagcagagacccagctgtgtgtccccaggactgcacaagtggaaacatt
attggtggccatgggaagggcattggaaatcttggaattaaatcaggacatgggatttgt
tactgcttcccaagacagaactgttattgtgagaaagatgatatcaaagagcaactgtgc
gatgacctgtgcaagactgtgatcacaggggcagtggtgctgtgcttcgtcatctccgtg
ctggtttccttctactgcatccaccggtaccacaagaacgccccgaagccgcccatcgcc
tctgcagaaatgacgttccggcgccccgtgcagccctaccccatcagctactcctccagc
aacgtccgccggccttccctggactccatggagaaccaggtgtctgtggacaccttcaaa
ataccagaagatccaaagtgggaattccctcggaagaacttagttctgggcaagactctt
ggagaaggagaatttggaaaggttgtcaaggcgacagcgttccgacttaagggaagggct
ggctatactactgtggcagtgaaaatgttgaaagaaaatgcttcccagagtgagctgcga
gatctcctgtcagagttcaaccttctgaaacaagtcaaccatcctcatgtcatcaaactt
tatggagcctgcagtcaagatggcccactgtatttaattgtggaatatgccaaatacggc
tctttgcgcagtttcctcagggaaagtcgaaaagtaggcccgagctacgtggggagtgat
ggcaacagaaattccagttatttggataaccctgatgagagagccttaacgatgggagac
ctgatatcgtttgcatggcagatatcccgagggatgcagtaccttgcagaaatgaagctt
gtgcatcgggatttagcagccaggaacgtgctggtggcagaagggcgcaaaatgaagatt
tctgatttcggcctctcgcgtgatgtatatgaagaagattcctatgtaaagaggagcaag
ggtcgaatccctgtgaaatggatggccatagagtcactatttgaccatatctacacaaca
caaagtgatgtatggtcatttggagttctgctgtgggagattgttactttaggaggcaat
ccttacccaggtattgctcctgaaagactctttaacctcctaaaaacaggctatagaatg
gagaggccagaaaactgcagtgaagaaatgtacagcctcatgttgcgctgttggaagcaa
gaagctgataaaagaccaacatttactgagatcagcaaggaactagagaaaatgatggtg
aagagtagggactacttagaccttgcagcttccacgccctctgattccttactgtacgat
gatgggctctcagaagaggagacacctctcgtggactgtaataatgctcccctccctcga
accctcccttccacatggattgaaaacaaactctatggcatgtcatacccgaactggcct
gaggagagtcccgttccactcacaagattcgatggcactaactctgtgttttcaagatat
gcaaatgatagtgtatatgctaactggatggtttcacactcagcggcaaagtttatggac
aagtttgatagctaa
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