Taeniopygia guttata (zebra finch): 100225755
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Entry
100225755 CDS
T01082
Symbol
POLR1B
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
100225755 (POLR1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tgu03021
]
100225755 (POLR1B)
Enzymes [BR:
tgu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
100225755 (POLR1B)
Transcription machinery [BR:
tgu03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
100225755 (POLR1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
100225755
NCBI-ProteinID:
XP_030124753
Ensembl:
ENSTGUG00000005237
LinkDB
All DBs
Position
3:92260827..92274907
Genome browser
AA seq
1124 aa
AA seq
DB search
MAGTGTGPRPDPHRLRPPRRGTAAQRHLTSAHIESFNYAVSEGVYRAVQEVPSVEFALKD
TRLALTLVGVSITPPAVPAGTVCQERRVFPAECRGVRSTYRGRITADISWSLNDMPQGTI
KHPLGYIPIMVKSKLCNLYGFSPQDLMQHHEEEEEMGGYFIINGLEKVVRMLIMPRRNFP
LAMTRQKWKNRGPGFTEYGVVMHCVKDEHTAINMNLHYLENGCVMVNFIFRKELFFLPLG
FALKALVNFPDYQIFEELVKGREDDTFYANCVTEMLRAVVDAGCLTQQNVLDYLGKSFRV
KLNLPEWYSNEQAADFLLSNCICIHLTNRTEKFYLLCMMTQKLYAFAKGECMEDNPDSLM
NHEVLTPGQLFLMFLKERLETWLQSVRFVLEKRAEKANITLNTDSLVKAFSLAPDFTRPF
EYLLATGNLRSKTGLGMLQASGLCVVGDKLNFIRYLSHFRCIHRGAAFSQMRTTTVRKLL
PESWGFLCPVDTPDGEPCGLMNHMTALCEIVTEMVPVRDIPPLLCSLGVTPIDAAPSRPY
SECYRVVLDGSMVGWVEQELAPEIAETLRRFKITQEKRFPARAEVVLIPMTGKPSLYPGL
FIFTNPCRMVRPVRNLSYGRNEWIGTLEQIFMNVATLESEVVPGVTTHQELFPHSILSVV
ANLIPFSDHNQSPRNMYQCQMGKQTMGFPVYNYKDRSDNKLYHLHTPQSPLVRPSMYDYY
GMDSYPVGTNSIVAVISYSGYDMEDAMIVNKSSWQRGFAYGSVIKAESIDLSLKASRAGD
NLVFGIKPGDPNIGEKLDADGLPFVGSILQPGDPFYSFMNLNTGETFTVYYPSKEVGIVD
NVRLCSNDRGTGKFKKVCITVRVPRNPTIGDKFASRHGQKGILSQLWPVEDMPFTENGMV
PDILFNPHGFPSRMTIGMLIESMAGKSAALHGVSYDATPFTFTEKKSALKYFGETLASAG
YNFFGTEKMYSGISGVELEADIFVGVVYYQRLRHMVSDKFQVRTTGPRDAVTNQPVKGRN
VEGGIRFGEMERDALLAHGTSFLLQDRLFNCSDGSIAYVCTSCGSMTSPVLEKLSRSSVT
SSRRYSCSTCSEVEAIEVVPVPHVFRYFVAELAAMNIKTKLNVE
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcaccgggacggggccgcgcccggacccgcaccgcctgcggccgccgcggcgc
ggcaccgcggcccagcgccacctcaccagcgcccacatcgagtccttcaactacgccgtc
agcgagggcgtctatcgcgccgtgcaggaggtgccctcggtggagttcgcgctgaaggac
actcggctggcgctgacgctggtcggggtgtccatcacccctcccgccgtgccggccggg
acggtgtgccaggagaggagggtgttcccggcagagtgccgcggggtccgcagcacctac
cgcggcaggatcaccgctgacatcagctggtcattgaatgacatgccacaagggactatc
aaacaccccttaggatatattccaatcatggtgaagtccaaattgtgcaacctctatggt
ttttctccacaagaccttatgcagcatcatgaggaagaagaggaaatgggaggctacttt
ataatcaatggcttagaaaaagtagtcaggatgctgattatgcccaggcgaaatttccct
cttgcaatgacaagacaaaagtggaaaaacagaggccctggtttcactgagtatggggtg
gtgatgcactgtgtcaaggatgagcatactgcaataaatatgaaccttcactacttggaa
aatggctgtgtcatggtgaatttcatttttcgcaaagagttgttcttcctccccttggga
tttgctctgaaggcattggttaatttcccagactaccagatttttgaagagttggtgaaa
ggaagggaagatgacaccttttatgcgaactgtgttactgagatgctgagagctgtggtg
gatgctggctgtttgacacagcaaaacgtcctggattacctgggaaagagcttcagagtg
aaactcaacctgcctgagtggtacagcaatgaacaggctgcagatttccttctgagcaat
tgtatatgtattcacctgaccaatagaactgaaaagttctacctgctctgtatgatgacc
cagaagctctatgcttttgccaaaggggaatgcatggaggataatccagacagtcttatg
aatcacgaggtgcttactccaggacagctcttccttatgttcttaaaggagaggcttgaa
acctggctgcagtctgttaggtttgttttggagaaaagagcggaaaaggcaaatatcacc
ctaaatacagacagcctggtgaaggcattcagcctggcaccagactttaccaggccattt
gagtatctgcttgcaactggtaacctgaggtctaaaacagggctgggcatgttgcaggcc
agtggtctgtgtgtggtgggggacaagctgaatttcatccgctacctctcccacttccgc
tgcatacacagaggggcagcattttcccagatgagaaccacgactgtccgcaagctgctg
cccgagtcctggggcttcctatgccctgtggacaccccagatggagagccctgtgggctg
atgaaccacatgacagctctgtgtgaaattgtcactgagatggtgcccgtgagagacatt
ccacctttgttatgttccctgggtgtcacccccattgatgcagctccaagccggccttac
tcagaatgctacagagttgtgctggatggctccatggtgggctgggtagagcaggagctg
gctcctgagattgcagaaactctccgtcgtttcaagataacacaagagaagagatttcct
gcacgggcagaagtggtccttatcccaatgacaggaaaacccagcctgtatcccggactc
ttcattttcactaacccttgtaggatggtgcggcctgtcagaaacctgtcctatggaagg
aatgaatggattgggactctggaacagatcttcatgaatgtggccactctggagtcagag
gtggtgcctggagtgaccactcaccaggaactcttccctcacagcattttgagtgtggtg
gccaatctcattcccttctctgaccacaaccaaagtccacggaacatgtaccagtgccag
atgggaaagcagaccatggggtttcctgtttacaactacaaggatcgctcagataacaag
ctgtaccacctgcacacccctcagagccctctggtgaggcccagcatgtatgactattat
gggatggacagctatcctgttggcaccaattccatcgtggctgtcatctcctacagtggc
tatgacatggaagatgcaatgatcgtaaataaatcttcctggcagagaggatttgcttat
ggaagtgttatcaaggcggagagcattgacctttcccttaaagccagcagggcaggagat
aatttagtatttggcatcaagcctggcgatccaaatattggggagaagctggatgctgat
ggactgccttttgttgggtctatcctgcagcctggggatcccttctacagcttcatgaac
ctcaacacaggggagaccttcactgtgtactatccgagtaaggaagtgggcattgtggac
aacgttagattgtgcagcaacgaccgtggcactgggaagttcaagaaggtttgcatcact
gtgagggttccccgaaatcccactattggagacaaatttgccagccgtcacggacagaaa
ggtatcctgagccagctctggcccgtcgaggacatgcccttcacagagaatgggatggtt
ccagacatcctcttcaaccctcacggctttccctcccgcatgaccattgggatgttaatt
gagagcatggcggggaagtcagcagccctacatggggtctcctatgatgccactcccttc
accttcacggagaagaagtctgctctgaaatacttcggtgagactttagcgagcgcaggt
tacaacttctttggcacagaaaagatgtacagcggcatcagcggggtggagctggaggca
gacatctttgtgggggtggtgtactaccagcgcctgcgccacatggtctccgacaagttc
caggtgaggaccacggggccccgagatgctgtcaccaaccagcctgtcaagggcaggaac
gtggaaggtgggatccgcttcggcgagatggagcgggatgctctgctggcccatggcacg
tccttcttgctgcaggaccgcctgttcaactgctccgacggctccatagcctacgtgtgc
acaagctgcggcagcatgacatcccctgtgctggagaaactgtcccgctcctctgtgacc
agcagcaggaggtattcctgctccacctgcagtgaggtggaggccatcgaggttgtccct
gtgccccacgtcttccgctactttgtggctgagttggcagccatgaacataaaaacaaag
ctcaatgtggagtag
DBGET
integrated database retrieval system
