Taeniopygia guttata (zebra finch): 100229068
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Entry
100229068 CDS
T01082
Symbol
SLC6A4
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tgu02000
]
100229068 (SLC6A4)
Transporters [BR:
tgu02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
100229068 (SLC6A4)
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Gene cluster
GFIT
Motif
Pfam:
SNF
5HT_transport_N
PRONE
Motif
Other DBs
NCBI-GeneID:
100229068
NCBI-ProteinID:
XP_004186287
Ensembl:
ENSTGUG00000006501
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Position
19:3658090..3679110
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AA seq
668 aa
AA seq
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MEKKTTGNEKEPLTSKKDVSDCSKGEDCKENGLLVRNPKSALRLVEDANKVHPSQGDKGE
AAQISNGFSGVQSSVPCNGEVEDAQGMAPAATTTTTTTTSTTCGAEAQQQLMELEDRETW
SKKIDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLIPYTIMALFGGIPLFYMELALGQY
HRNGCISIWRKICPIFKGIGYAICIIDLYVASYYNTIMAWAFYYLISSFTAELPWTSCTN
PWNTANCTNYFSKDNVSWSLHSISPAEEFYTRQVLQVHRSNGLDDLGGISWQLTLCLLLI
FTIVYFSIWKGVKTSGKVVWVTATFPYIILFILLVRGATLPGAWRGVLYYLKPDWQKLLA
TEVWVDAAAQIFFSLGPGFGVLLAYSSYNKFHNNCYQDALVTSTVNCLTSFVSGFVIFTV
LGYMAEMRNEAVSEVAKDTGPSLLFITYAEAIANMPASTFFAIIFFLMLLTLGLDSTFAG
LEGVITGVLDEFPHVWGKRRELFVLGLTIVCFLGSLATLTFGGAYVVKLFEEYATGPAVL
TVVFLEAVAVSWFYGITQFCNDVKEMLGSAPGWYWRVCWVAISPLFLLFVTCSFLSNPPE
LKLFDYYYPYWTTVVGYCIGTSSIIFIPIYMVYRLVITPGTLKERILKSITPETATEIPF
GDIRMNAV
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaaagaccacaggcaatgagaaagagcccctgacttccaagaaagatgtctca
gactgtagcaaaggagaagactgtaaagagaacggacttctggtcaggaaccctaaatct
gccctacggctggtggaggatgccaacaaagtccacccgagccagggggataaaggggag
gcagctcagatctccaatggtttttcaggagttcagagctcagtgccctgcaatggagag
gtggaggatgcccagggcatggccccagcagccaccaccaccaccaccaccaccacctcc
accacctgtggggccgaggctcagcagcagctgatggagctggaggacagggagacctgg
agtaaaaaaattgactttctcctctctgtcattggatacgcagtggatctggggaatgtg
tggagatttccttatatctgctatcagaatggaggaggagcattcctcattccttacaca
atcatggccctctttggagggattcctctcttctatatggaattagcactaggacagtac
cacaggaatggctgtatttccatttggagaaaaatatgtcctatattcaaaggaattggc
tatgccatctgtatcatagatctttacgtagcctcctactacaacaccatcatggcttgg
gctttttactacctcatctcctccttcacggcggagctgccctggaccagctgcacaaac
ccctggaacacagcaaactgcaccaactacttcagcaaggacaatgtcagctggtccctg
cactccatctctcctgcagaagaattttatacccgccaggttctgcaggtgcacaggtcc
aatgggctggatgacctgggaggcattagctggcagctgaccctctgcttgctgctgatc
ttcaccattgtgtacttcagcatctggaaaggggtcaaaacatctggcaaggtggtttgg
gtgactgccacgttcccttacatcatcctcttcatcctgctcgtgagaggtgcaactttg
cctggggcttggagaggtgtcctctactacttgaaacctgactggcagaaactcctggcc
actgaggtttgggtggatgcagcagctcagatttttttctccctgggaccaggttttggg
gtcctgttggcttattccagctacaacaaattccacaacaactgctaccaagatgctctg
gtcaccagcaccgtgaactgcttgaccagctttgtgtctgggtttgtcatcttcaccgtg
ctggggtacatggctgagatgaggaatgaagctgtctcagaggttgccaaggacactgga
cccagcctgctcttcatcacctacgctgaggccattgccaacatgccagcttccaccttc
tttgccatcatcttcttcctcatgctgctcacgctggggttggacagcacgtttgcagga
ctagagggagtgattactggagtcctggatgaattcccacacgtctggggcaaacgcagg
gaattgtttgtccttggtctgaccatcgtttgctttttggggtcgctggcaaccctgaca
tttggaggagcatatgtggtgaagctgtttgaggaatatgccaccggtccagctgtcctc
accgtcgtgttcctggaggcagtggctgtgtcctggttctatggcatcacccagttttgc
aacgatgtgaaagaaatgctgggctctgccccaggctggtactggcgagtttgctgggtt
gcaattagtccccttttccttctgttcgtcacttgcagctttctgtccaaccctcctgag
ctgaagctttttgattattattatccctactggaccacagttgtgggttactgcatagga
acctcctccatcatcttcattcccatctacatggtctatcgcttggtcatcaccccaggg
acacttaaggagcgtattctgaaaagcattaccccagaaacagctacagaaattcccttt
ggagacatccgcatgaacgcagtataa
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