Taeniopygia guttata (zebra finch): 100231999
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Entry
100231999 CDS
T01082
Symbol
TRMT2B
Name
(RefSeq) tRNA (uracil(54)-C(5))-methyltransferase homolog isoform X1
KO
K15331
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
tgu
Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tgu03016
]
100231999 (TRMT2B)
Enzymes [BR:
tgu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
100231999 (TRMT2B)
Transfer RNA biogenesis [BR:
tgu03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
100231999 (TRMT2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
MTS
Methyltransf_4
Methyltransf_32
Ubie_methyltran
Methyltransf_11
Methyltransf_15
Methyltransf_12
PrmA
AviRa
UPF0020
Methyltransf_23
TPMT
DREV
Motif
Other DBs
NCBI-GeneID:
100231999
NCBI-ProteinID:
XP_002187418
Ensembl:
ENSTGUG00000006755
LinkDB
All DBs
Position
4A:complement(18409648..18416482)
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AA seq
467 aa
AA seq
DB search
MALCCAPRPPLALLRLPARHRSLVTATGAPRHGKKKARVSRSLPEPSWEERLANAVTPLW
RLSYQEQLQVKYESQKKILQTLASRLEELGIDAQKPGGLCCPLQPVVPSPIISGYRNKST
FSVNRGPDGNPKTVGMYVGTGRERNIVCVNANHVENIPSKHKQVAQCYEEFICQSPLDSC
ILFHEGGHWRELVVRTTRCGHTMAIITFHPQQLGQEALATQKALLKEFFTCGPGAVCALT
SLYFQESTMTRCSHEQSPYQLLHGAPHIFEELHGLKFRISPDAFFQVNTAGAEILYQAVG
ELCQATGDTVLLDICCGTGTIGLSLAHQVSKVIGVEVVEKAIEDAEWNAAFNGISNCEFH
GGKAEAVLPQLLALWEDARPLVAVVNPSRAGLHHRVVRAIRNCRSIRRLLYISCKPEGEA
MRNFLELCCPPDPQKKLAGEPFVPVLAIPFDMFPHTVHCELVLLFTR
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggctctgtgctgcgcgccgcggccgccgctcgccctgctccgcctgcccgctcggcac
cgcagcctggtgacagccacaggggcaccgcggcacgggaagaaaaaggccagggtgagc
cgcagcctgccagagccttcctgggaggagaggttagcaaatgcagtgacaccactgtgg
agactttcctaccaagagcagctacaggtaaagtatgaaagccagaagaagattttgcag
acactggcatctcgtcttgaggagctgggcatagatgcacagaaacctggtgggctctgc
tgtcctctgcagcctgtagtcccttcgcccatcattagtggctaccgaaacaaatcaacg
ttctcagtgaaccgaggaccagatgggaaccccaaaactgtggggatgtatgtaggaact
ggcagagaaagaaatattgtctgtgtgaatgccaaccatgtggagaacataccctcaaaa
cacaaacaagtagcccagtgctatgaggagttcatctgtcagtcccctctggactcgtgc
atcctcttccatgaaggtggacactggcgggagctcgtggttcgtaccactcgctgtggc
cacactatggctatcatcaccttccacccccagcagctgggccaggaggcactggctact
cagaaagcattgctgaaggagttcttcacatgtgggcctggagcagtctgtgccttgaca
tcactttatttccaagagagcaccatgacacgttgctcccacgagcagtccccgtaccag
ctcctccacggagcaccgcacatctttgaagagctgcacggcctgaagttccgcatctct
ccagacgccttcttccaagtcaacacagctggagcagaaattctgtaccaggcagttggg
gagctctgccaggctactggggacactgtcctccttgacatctgctgtggaacaggcaca
attggtctctctctggctcaccaagtgtccaaagttattggtgttgaggtggtggagaag
gcaatagaggacgctgagtggaatgcagcattcaatgggatctcaaactgtgagtttcac
ggtggaaaggcagaggctgtgttaccacagctcttggcattgtgggaggatgcccgaccg
cttgttgctgtggtgaacccttctcgggctggcctacatcacagggtcgtacgggccatc
cggaactgcaggtccatccgcaggctgctctacatctcctgcaagccagagggagaagcc
atgaggaacttcctcgagctgtgctgcccacctgacccacagaagaagctggcaggggag
ccatttgtccctgtgctggctattccttttgacatgtttcctcacactgttcattgcgag
ctggtgctgctgttcacccgctga
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