Taeniopygia guttata (zebra finch): 778440
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Entry
778440 CDS
T01082
Symbol
GRIN2A
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2A isoform X1
KO
K05209
glutamate receptor ionotropic, NMDA 2A
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu04020
Calcium signaling pathway
tgu04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
778440 (GRIN2A)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
778440 (GRIN2A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tgu04040
]
778440 (GRIN2A)
Ion channels [BR:
tgu04040
]
Ligand-gated channels
Glutamate (ionotropic)
778440 (GRIN2A)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
778440
NCBI-ProteinID:
XP_012432825
Ensembl:
ENSTGUG00000004747
LinkDB
All DBs
Position
14:10479605..10635010
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AA seq
1458 aa
AA seq
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MRKIGCALLVLQALLAPLDLVRGAEKNYPILNIAVILGRTKYITERDIRALWTREMAADL
SVDINVVTLLVNQTDPKSIITHVCDLMSGTKIHGVVFGDDTDQEAVAQILDFISSQTSIP
ILGIHGGASMIMADKDVMSTFFQFGASIQQEAIIMLKIMQDYDWHVFSLVTTTFPGYRDF
INVIKTTVENSFVGWDMQNVIILDTAFGDAKTQIQLKKIHSSVILLYCSKDEAVYILDEA
RSLGLTGYDFFWIVPSLVSGNTEITPKEFPSGLISAAYDEWDYSLEARVRDGLGVIATAA
SAMLEKYSFIPEARTSCYGQLEKNDRPSQTLHKFMMNVTWEGRDLSFTADGYQAHPRLVV
IVLNNEREWEKVGKWENNSLSLKYSVWPRYSSFADSDPDDNHLSIVTLEEAPFVIVEDVD
PLMESCQKNTVPCRKFVRLNNKTNEGTNVKKCCKGFCIDILKKLSKTVKFTYDLYLVTNG
KHGKKVNNVWNGMIGEVVYHRAVMAVGSLTINEERSEVVDFSVPFVETGISVMVSRSNGT
VSPSAFLEPFSASVWVMMFVMLLIVSAMAVFIFEYFSPVGYNRNLAQGRDPHGPSFTIGK
AVWLLWGLVFNNSVPVQNPKGTTSKIMVSVWAFFAVIFLASYTANLAAFMIQEEFVDQVT
GLSDKKFQRPHDYSPPFRFGTVPNGSTERNIRNNYPDMHLYMTKFNQKGVEDALVSLKTG
KLDAFIYDAAVLNYKAGRDEGCKLVTIGSGYIFATTGYGIALQKGSPWKRQIDLALLQFV
GDGEMEELETLWLTGICHNEKNEVMSSQLDIDNMAGVFYMLAAAMALSLITFVWEHLFYW
KLRFCFTGVCSDRPGLLFSISRGIYSCIHGVHIEEKKKSPDFSLTNSQTNMLKLLRTAKN
MTNINPSRIDSPKRTADFIQRGSLLMDMVMDKGNLIFSDNRSFQTKDNFFGDNISELQTL
PGNRHKDNLNNYVFQGQHPLTLNESNPNTVEVAVTTEGKANSRPRQLWKKSVESLRQDSI
RPGQGSQRENGSEENRQLSLKSQRYLPEEIVHSDVSETSSRATCHMEAENNNKHHKTKDN
FKKRTVASKYPKDCSEVELTYLKTKQGSPRDKIYTIDADKEPGFRLDTPQYIENIVLPEP
VELPDVYQDHNDNYRKAEHANRTPSHNEESLPNNDQYKLYGKHYTLKEKNATLGDLNDRY
RQNSTHCRSCLSNMPTYAGHYSTRSPFKCDACLRMGNLYDIEEDQMLQDTTNLSLPEEIY
ERTWSQSSALPYQKKNKLRISRQHSFDNIADKSREIDIGRPSRSISLKEREKFLQSSPYA
SMFSVPSSKLLSNKASLLTHALEDSKRSKSLYAVHSDDNPFLHSYRDDQHLSLRRSPADL
YKHSLPTRGRNDNYLRSSIQSTASYSSRDGRIHNDMYISEHVLPYVANRNSLYSTPRVLN
SCSNTRVYKKRPSIESDV
NT seq
4377 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaaattggctgtgctctcctggtactccaagctcttctggcacctttggatctt
gttcgtggagcagagaaaaattatcccatcctgaacattgcagtgattctgggaaggacc
aagtatataacagagagagatatcagagctctctggaccagggaaatggccgcagacctg
agtgttgatatcaatgtagtgactcttcttgtgaaccagactgaccctaaaagcatcata
acacatgtttgtgacttgatgtcaggcaccaagatccatggagtggtttttggagatgac
actgatcaggaggcagtagctcagattttggattttatttcatctcagacttctattcca
attcttggaattcatggcggcgcctctatgataatggcagataaggatgtcatgtccacg
ttcttccagtttggagcttccatccagcaagaagccattatcatgctgaagatcatgcag
gattatgactggcatgtgttctctctggtgaccaccactttccctggatatcgagatttc
atcaatgtcattaagaccactgtggaaaacagttttgtgggctgggacatgcagaacgtc
atcatactcgatactgcctttggagatgccaagacccaaattcagctgaagaaaatccat
tcatctgtcatcctgctgtattgttccaaggacgaagctgtctacatcctggatgaggct
cgctccctgggccttactggctatgatttcttttggatagttcctagcctggttagtggt
aacacggaaatcactcccaaggagtttccttcaggactcatttcagcagcttatgatgag
tgggactacagtttagaagctcgggtacgggatggcctcggggtcattgccactgctgca
tcagccatgctggaaaagtactccttcattcctgaggcaagaacgagctgctatggacag
ctggagaaaaatgaccggccctctcaaaccttgcacaagtttatgatgaatgtgacgtgg
gaaggcagagatttgtccttcacagcagatggttaccaggcccaccccaggctggtggtg
atcgtgctgaacaacgagcgggagtgggagaaggtggggaagtgggagaacaactccctg
agcctcaagtactcagtgtggccgaggtacagctcctttgcagacagcgaccccgacgac
aaccacctgagcattgtcaccctggaggaggctccctttgtcatcgtggaggatgtggat
cctctcatggaaagctgccaaaaaaacaccgtgccatgccggaaatttgtcagacttaac
aacaaaactaatgagggaactaacgtaaagaagtgctgcaaaggattctgcatcgatatc
ctgaagaagttgtctaaaactgtcaagttcacatatgacctgtacttggtgacgaatggg
aagcatggcaaaaaagtcaataatgtgtggaatggaatgattggtgaagtggtgtaccac
cgggcagtgatggccgtgggctctctcaccatcaacgaggagcgctcggaagtcgtcgac
ttttcggtgccgttcgtggagaccgggatcagtgtcatggtgtcacggagcaacggcaca
gtttcaccatctgcttttctagagccttttagtgcttctgtctgggtgatgatgtttgtg
atgcttctcatcgtgtctgccatggctgtctttatatttgagtactttagtcccgtagga
tacaacaggaacttagcacaagggagagatccccatggaccatccttcaccattggaaag
gcagtgtggctactgtggggcttggtcttcaacaactctgtgcctgtgcaaaaccccaag
gggacaacgagtaagatcatggtgtcagtctgggctttctttgctgtcattttcctggcc
agttacactgccaacttagctgcctttatgattcaagaggaatttgttgatcaagtgact
gggctgagtgataaaaagtttcaaaggccacatgattattcacctccttttcggtttgga
acggtcccaaatggaagcactgagaggaatatccgaaacaactaccctgacatgcacctt
tacatgaccaagtttaaccagaaaggagttgaagatgccttggtcagcttgaaaactggg
aagttggatgctttcatctatgatgcagcggtgctgaattacaaggctggaagagatgaa
ggctgcaaacttgtcacaataggcagtgggtacatctttgccactactggctatgggatt
gctctccagaaaggatcaccttggaagagacaaattgatctcgccctccttcaatttgtg
ggagacggggaaatggaagagttagaaactctgtggctgactggtatttgtcacaacgag
aagaacgaagtcatgagcagccagctggacatcgacaacatggcaggggtgttttacatg
ctcgcagcagccatggcactcagcttaataacctttgtctgggagcacttattttactgg
aaacttagattctgcttcactggagtctgctcagataggccgggattgctgttctcaatc
agcaggggtatttacagttgcattcatggagtacacattgaagagaaaaagaagtctcct
gacttttctttgaccaattcacaaaccaacatgttaaaactgctgcgaacagcgaaaaac
atgaccaatatcaatccttcaaggattgactcccccaaaagaacagctgattttattcag
aggggttctttgcttatggacatggtcatggataagggaaacttgatattttctgataac
aggtcctttcagacaaaggacaacttttttggtgacaacataagtgaactgcagacactt
cctggcaatcgacacaaggacaatctgaacaactatgttttccaagggcagcatcctctc
acattgaatgaatccaatccaaatacagtagaggttgcagtaacaacagaaggaaaagcg
aactccagacccaggcagctttggaagaaatctgttgaatctttacgccaagattctata
cgtcctggccaaggctcccagagagaaaatgggtccgaggaaaacaggcagctttcattg
aaaagccaaagatacctccctgaagagattgtccattcagatgtctcagagacatcaagc
agagctacttgccacatggaagctgaaaacaacaacaagcaccacaaaaccaaggacaat
tttaaaaaaaggacagtagcatcaaaatacccgaaagactgtagtgaagtggaactgaca
tatctgaaaaccaaacagggctctccacgggataaaatctacacgattgatgctgacaag
gagccaggattccgcttggacacacctcagtacattgaaaacattgtccttccagaacct
gtagagcttcctgatgtttaccaagatcacaacgacaactacaggaaagctgaacatgct
aataggactccatcacataatgaagagagtcttccaaataatgaccagtataaactttat
ggaaaacactacactctcaaagaaaaaaatgctactctaggtgacctgaacgataggtac
agacagaattccacccactgcaggagctgtctctccaacatgcccacttacgcggggcac
tactcgaccagatctccctttaaatgcgatgcatgcttgcggatggggaacctctatgat
attgaggaagatcagatgctgcaggatacaacgaacttatcacttcctgaagaaatatat
gagcgtacttggtcacaaagtagtgctctgccatatcaaaaaaagaataaactgaggatt
agcaggcaacactcttttgataatatcgctgataagtccagggaaattgatattggaaga
ccttctcgtagtataagcttgaaagaaagagagaaatttcttcaaagtagtccatatgca
agcatgtttagtgttccctcaagcaaactgttgagcaacaaggcctcacttttaactcat
gctctggaggacagtaagcggagcaagtccctgtacgctgttcactcggatgataacccc
ttcctgcactcctatcgtgatgaccagcatttatctcttaggcgaagtccagcagatctt
tataaacactcattgccaacaagaggaagaaatgataattatttaaggtcatccatacag
tctacagcatcatactcttccagggatggtcggatccataatgacatgtacatttcagag
catgttttgccttacgttgcaaataggaatagcttgtactcaactccaagggttttaaat
tcctgtagcaatacacgtgtgtataagaaaaggcctagcattgaatcagatgtttaa
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