Taeniopygia guttata (zebra finch): 778441
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Entry
778441 CDS
T01082
Symbol
GRIN2C
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu04020
Calcium signaling pathway
tgu04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
778441 (GRIN2C)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
778441 (GRIN2C)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tgu04040
]
778441 (GRIN2C)
Ion channels [BR:
tgu04040
]
Ligand-gated channels
Glutamate (ionotropic)
778441 (GRIN2C)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
NMDAR2_C
Motif
Other DBs
NCBI-GeneID:
778441
NCBI-ProteinID:
XP_030143576
LinkDB
All DBs
Position
18:9127029..9142156
Genome browser
AA seq
1549 aa
AA seq
DB search
MEERGEGKEGVSAPSLPGPAARRGGPVSGGRAACPPFPPFPPFPPFPPFPRGWRPAPKLR
RGGRTHVLSFHRPRAPPSLQPRIPPPLLPSVPPGQPRRSRGGGRWLPGLGDRRDTCCHRG
PPRAHPLRSRSLLPPLPSLLQPPLQSRRRRRRRQGRAGTDGGHRSAPPAAAGAHPAPRGC
PAGGEALEEPSPRWDEPRRGRGACRHRAAAVPDTLVDMGRAPAHALLLWMVLGCWAAFTD
ILLPGAEEPVVNVAVVFGGTSYPLHVRSRLSPQSFLDMPLEIHPITVVVNNTNPSTLLTQ
ICDILAGHKIHGIVFEDNVGTEAVAQILDFISSQTQVPIISISGGSAVVLTPKEPGSAFL
QLGVSIEQQIQVIFKVLEEYDWGSFAVITSLYPGYNIFLDVIRSFTDASYFGWELQEVLT
FEMSQEQSSSRTQRLLRQIDAQVLIVYCSREEAEYLFSMAEQAGLVGPGYIWIVPSMTVG
NMEVPPSSFPVGLISVVTESWKLSLRQKVRDGVAIIAMGAASFFRAHGYLPEVGRDCWTP
TRATTTNTSFYRHLLNVTWEHRDFSFNEGGYLVKPTMVVITLNQHRLWEMVGRWEKGIIH
MKYPVWPRYGSFMQPVVDNRHLTVATLEERPFVIVENTDPSTGVCVRNTVPCRKQTNSSQ
SGDGLVDPYTKLCCKGFCIDILKKLAKAVKFSYDLYLVTNGKHGKIVRGVWNGMIGEVYY
KRADMAIGSLTINEERSEIVDFSVPFVETGISVMVARSNGTVSPSAFLEPYSPAVWVMMF
VMCLTVVAITVFVFEYFSPVGYNQNLTSGKRPGGPSFTIGKSVWLLWALVFNNSVPIENP
KGTTSKIMVLIWAFFAVIFLASYTANLAAFMIQEQYIDTVSGLSDRKFQRPQEQYPPFRF
GTVPNGSTERNIRSNYPDMHTHMVKYNQRSVEDALTSLKMGKLDAFIYDAAVLNYMAGKD
EGCKLVTIGSGKVFATTGYGIALQKDSRWKRAIDLALLQFLGDGETQKLETVWLSGICQN
EKNEVMSSKLDIDNMAGVFYMLLVAMGLSLLVFAWEHLVYWKLRHSVPKSHKLDFLLAIS
RGIYSCFNGVQTLSSPGRAPTPDVTASSAQANVLKMLQAAKEMVTTASVGGSLEQATRTI
EDWSNHSERLQTTFSLRTPQLVVQNSTGAHRGPPSGPHPAERLGRAYAPKGAPLGLPLPQ
PIPVDSRLHGEENWRGENEHPHLLHPLKFRGGCVGDEALTGFPHLLVKTSPGGDYGEQVL
VGNHVGAPLPPPTSPRDLPPPDIYREHKRPSGRGDRLQTNALLQRDGAHGGSGTVPRLLS
AAEKKREVGSAFLPPSCSRGAFPKITRTCRAGGEPARPEAAGMERDKLSRWASSAGAPGG
LRRCGAARTDLPDLFPEAEPGHGCPQPAARLPSYREACRQKPRAAFTVPPCAAHPCGNSN
LPLHARRGWRGSREHPGVQRCERGSREHPGVQRCERGSREHPGVQRWERGSGRWDGACRD
CGRRGELAWLRAVAVDRRDPPVPRGVARGVASPCAGGSWRRVSSLESEV
NT seq
4650 nt
NT seq
+upstream
nt +downstream
nt
atggaggagagaggcgaaggaaaagagggggtttcagccccttctctccccggccccgct
gccaggagaggcgggccggtttctggagggagggcggcctgccccccgttccccccgttc
cccccgttccccccgttcccccccttcccccggggctggcggccagccccgaagttgcgg
cgaggcgggaggacacacgtcctgtccttccaccgcccccgggctccccccagcctccag
ccccgcatccctcccccgctcctcccgtccgtcccgcccgggcagccccgccggtcccgg
ggcggggggagatggctgccggggctcggagatcgccgagacacctgctgccaccggggc
cccccccgtgcacacccgctccgctcccgctccctccttcccccgctcccgtccctcctc
cagccgccgctgcagagccgccgccgccgccgccgccgccaaggacgagccgggaccgac
ggcggccaccggagcgccccgccagccgcggcgggggcccaccctgccccccggggctgc
cccgcaggaggagaagctttggaagaacccagcccccggtgggacgagccccgccggggc
cgcggggcatgtaggcaccgagcagcggcggtcccggacacgctggtggacatgggcaga
gcgccggcgcacgctctgctactgtggatggtgctgggctgctgggccgccttcacggac
atcctgctgcccggcgctgaggagccggtggtcaacgtggccgtggtgttcgggggcacg
tcctaccccctgcacgtccgctcccgcctgagcccccagagcttcctggacatgcccctg
gagatccaccccatcaccgttgtcgtcaacaacaccaaccccagcaccctcctcacccag
atctgcgacatcctcgccggccacaagatccacggcatcgtcttcgaagacaacgtgggc
acggaggctgtggcccagatccttgacttcatctcctcccagacccaggtccccatcatc
agcatcagtggcgggtctgcagtggtcctgaccccgaaggagcctggatcagctttcctg
cagttgggtgtctccatcgagcagcaaatccaggtgatcttcaaggtgctggaggaatac
gactggggctcctttgccgtcatcaccagcctctacccaggctacaacatcttcctggac
gtcatccgctccttcacggatgccagctactttggctgggagctgcaggaggtgctcacc
tttgagatgagccaggagcagagcagctccaggacgcagcggctcttgcgccagattgat
gcccaggtcctcattgtttactgctcccgagaggaggccgagtatctcttctccatggca
gagcaagctgggcttgtggggccaggatacatctggatcgtgcccagcatgacagtgggc
aacatggaggtgccgccctcctccttccccgttggcctcatcagcgtggtgacggagagc
tggaagctgagcctgcggcagaaggtgcgggacggcgtggccatcattgccatgggggca
gccagcttcttccgtgcccatggctacctcccagaggtggggcgggactgctggaccccc
accagggccaccaccaccaacacaagcttctaccggcaccttctgaatgtgacatgggag
cacagggacttctccttcaatgaaggtggctacttggtcaagcccaccatggtggtgatc
acgctcaaccagcaccggctctgggagatggtgggcaggtgggagaaaggcatcatccac
atgaagtacccggtgtggccccgctacggctccttcatgcagcccgtggtcgacaaccgc
cacctgacagtggccaccctggaggagagaccctttgtcatcgtggagaacacggacccc
agcacgggggtctgcgtgcgcaacaccgtgccctgccgcaagcagaccaactcctcccag
agtggtgatggccttgtggatccctacactaagctgtgctgcaaaggtttctgcatcgac
atcctgaagaagctggccaaggcagtgaagttctcctatgacctctacctggtgaccaac
ggcaaacacggcaagatcgtccgtggggtgtggaacggcatgattggtgaggtgtactac
aagcgtgcagacatggccatcggctccctcaccatcaacgaggagcggtccgagatcgtg
gatttctccgtgccctttgtggagacgggcatcagcgtcatggtggcccggagcaatggc
accgtgtccccctctgctttcctggagccttacagcccagccgtgtgggtcatgatgttt
gtcatgtgcctcactgtggtggccatcaccgtctttgtgttcgagtacttcagccccgtt
ggctacaaccagaatctcaccagtggcaagaggccgggaggtccctccttcaccatcggc
aagtccgtgtggttgctgtgggctctggtcttcaacaactcagtccccatcgagaacccc
aagggcaccaccagcaagatcatggtgctcatctgggccttcttcgctgtcattttcctc
gccagctacacggccaacctggccgccttcatgatccaggagcagtacattgacactgtg
tcggggctgagtgacaggaagttccagaggccacaggagcagtacccacccttccgcttt
ggcactgtccccaacggcagcaccgagaggaacatccgcagcaactaccccgacatgcac
acccacatggtcaagtacaaccagcgctctgtggaggacgccctcaccagcctcaaaatg
gggaagctggatgccttcatctacgacgcggcggtgctcaactacatggcaggcaaggac
gagggctgcaagctggtgaccattggcagtgggaaggtgtttgccaccacgggctacggc
atcgccctgcagaaggactcgcgctggaaacgagccattgacttggccctgctccagttc
ctgggagacggtgagactcagaagctggagacagtttggctgtcagggatctgccaaaat
gagaagaatgaggtgatgagcagcaagctggacattgacaacatggctggggttttctac
atgctgctggtggccatggggctgagcctgctggtcttcgcttgggagcacctcgtctac
tggaagctgcgtcattccgtccccaagtcccacaagcttgacttcctcctggccatcagc
aggggcatctacagctgcttcaatggagtgcagaccctgtcgagccccgggcgggcgccc
acacccgatgtcactgccagctcagcccaggccaatgtgctgaaaatgctgcaggcggcc
aaggagatggtgaccacggccagcgtgggcggctcactggagcaggccacccgcaccatc
gaggactggagcaaccacagcgagcgcctccagaccaccttctccctgaggacacctcag
ctcgtggtgcagaacagcaccggcgcacaccgggggcccccctccggcccacaccctgcc
gagaggctggggagagcctacgctcccaagggtgctcccctggggctgccgctgccccag
cccatccccgtggactcccgtctgcacggagaggagaactggagaggggaaaacgagcac
ccccacctactacaccccctgaagtttcggggcggctgtgtaggggatgaagccctcaca
ggtttcccccacctcctggtgaagacttccccaggaggggattacggggagcaggtgctg
gtggggaaccatgtcggggctcccctcccgccccccacatcccccagggacctcccacca
ccggacatctacagggagcacaagcggccgtcgggacggggggaccggctgcaaaccaac
gcgctgctgcagagggacggggcacacgggggctcagggactgtgccccggctgctctcg
gcagcggagaagaagcgggaggtgggcagcgccttcctgcctccatcctgctctcgcgga
gccttccccaaaatcaccaggacttgcagagccgggggcgagccggcgcggccggaggcg
gcggggatggagcgggacaagctgagccggtgggcgagctcggccggggctcccgggggg
ctgcggcgctgcggggccgcccgcaccgacctgcccgacctcttccccgaagccgagccc
ggtcacggctgcccgcagcccgctgcccggctgccgtcctaccgggaggcttgccggcaa
aagccccgcgccgccttcaccgtgccgccgtgcgctgcgcacccctgcgggaactccaac
ctgcccctccacgccagacgcggctggcggggctcccgggagcaccccggggtgcagcgc
tgtgagcggggctcccgggagcaccccggggtgcagcgctgtgagcggggctcccgggag
caccccggggtgcagcgctgggagcggggctccgggcgctgggacggtgcctgcagagac
tgcgggaggcgcggggagctggcctggctgcgggcggtggcggtggacaggagggacccg
ccggtgccccgaggggtggcccgaggggtggcgagtccctgcgccggcggctcctggcgg
cgggtctccagcctggagtcggaggtgtga
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