Thauera sp. GDN1: CKCBHOJB_00576
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Entry
CKCBHOJB_00576 CDS
T09925
Symbol
rsmD
Name
(GenBank) Ribosomal RNA small subunit methyltransferase D
KO
K08316
16S rRNA (guanine966-N2)-methyltransferase [EC:
2.1.1.171
]
Organism
thag
Thauera sp. GDN1
Brite
KEGG Orthology (KO) [BR:
thag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
thag03009
]
CKCBHOJB_00576 (rsmD)
Enzymes [BR:
thag01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.171 16S rRNA (guanine966-N2)-methyltransferase
CKCBHOJB_00576 (rsmD)
Ribosome biogenesis [BR:
thag03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
CKCBHOJB_00576 (rsmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cons_hypoth95
MTS
Methyltransf_31
Methyltransf_25
MethyltransfD12
Methyltr_RsmB-F
TRM
BpsA_C
Methyltransf_11
PrmA
Met_10
GidB
Methyltransf_15
Spermine_synth
Motif
Other DBs
NCBI-ProteinID:
WEN41036
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All DBs
Position
complement(648290..648829)
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AA seq
179 aa
AA seq
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MSRVRIVGGQLRSRLLDVAAVPGLRPTPDRVRETLFNWLGQDLDGQHCLDLFSGTGILGF
EAASRGAAGVVLVERDPRALDALHKAAKTLQASQVEIVRGDAVRFAQTTPRRFDGVFLDP
PYKQGWIEQVQPWLDRLLEPAGWLYVESEAAVEQLGAWHVVRQGRAGQVHFHLMRRSQA
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcgtccgcatcgtcggcggccagttgcgctcccgcctgctcgacgtcgccgcc
gtgcccggcctgcggccgacgccggatcgcgtgcgcgaaaccctgttcaactggctgggg
caggatctcgacggccagcactgcctggatctcttctccggcaccggcatcctcggcttc
gaagccgcgtcgcgcggcgcggcgggcgtggtgctggtcgagcgcgatccgcgcgcgctc
gacgcactgcacaaggcggcaaagaccctacaggcgtcgcaagtagagatcgtgcgcggc
gatgcggtaagattcgcgcaaacgacgccgcgcaggttcgacggcgtgttcctcgatccg
ccctacaagcagggctggatcgagcaggtgcagccctggctcgaccggctactcgagccg
gcgggatggctttatgtcgagtccgaggccgcagtggagcagctcggtgcatggcatgtc
gtcaggcagggccgcgccgggcaggttcatttccatctgatgcgcaggagtcaggcatga
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